# STOCKHOLM 1.0
#=GF ID 3.40.1690.10/FF/000004
#=GF DE SPI-2 type III secretion system apparatus protein SsaU
#=GF AC 3.40.1690.10/FF/000004
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 1.703
#=GS P96069/210-350      AC P96069
#=GS P96069/210-350      OS Salmonella enterica subsp. enterica serovar Typhimurium str. LT2
#=GS P96069/210-350      DE Secretion system apparatus protein SsaU
#=GS P96069/210-350      DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella; Salmonella enterica; Salmonella enterica subsp. enterica; 
#=GS A0A0W3TM49/210-350  AC A0A0W3TM49
#=GS A0A0W3TM49/210-350  OS Salmonella enterica
#=GS A0A0W3TM49/210-350  DE SPI-2 type III secretion system apparatus protein SsaU
#=GS A0A0W3TM49/210-350  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella; Salmonella enterica; 
#=GS A0A2X4TD72/110-250  AC A0A2X4TD72
#=GS A0A2X4TD72/110-250  OS Salmonella enterica subsp. arizonae
#=GS A0A2X4TD72/110-250  DE Secretion system apparatus protein SsaU
#=GS A0A2X4TD72/110-250  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella; Salmonella enterica; Salmonella enterica subsp. arizonae; 
#=GS A0A3T0CBQ1/210-350  AC A0A3T0CBQ1
#=GS A0A3T0CBQ1/210-350  OS Salmonella enterica subsp. enterica serovar Karamoja
#=GS A0A3T0CBQ1/210-350  DE SPI-2 type III secretion system apparatus protein SsaU
#=GS A0A3T0CBQ1/210-350  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella; Salmonella enterica; Salmonella enterica subsp. enterica; 
#=GS A0A0C5PP61/210-350  AC A0A0C5PP61
#=GS A0A0C5PP61/210-350  OS Salmonella enterica subsp. enterica serovar Typhimurium
#=GS A0A0C5PP61/210-350  DE SPI-2 type III secretion system apparatus protein SsaU
#=GS A0A0C5PP61/210-350  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella; Salmonella enterica; Salmonella enterica subsp. enterica; 
#=GS A0A3R8SI56/210-350  AC A0A3R8SI56
#=GS A0A3R8SI56/210-350  OS Salmonella enterica subsp. enterica serovar Java
#=GS A0A3R8SI56/210-350  DE SPI-2 type III secretion system apparatus protein SsaU
#=GS A0A3R8SI56/210-350  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella; Salmonella enterica; Salmonella enterica subsp. enterica; 
#=GS A0A3V2FVS0/210-350  AC A0A3V2FVS0
#=GS A0A3V2FVS0/210-350  OS Salmonella enterica subsp. enterica serovar Braenderup
#=GS A0A3V2FVS0/210-350  DE SPI-2 type III secretion system apparatus protein SsaU
#=GS A0A3V2FVS0/210-350  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella; Salmonella enterica; Salmonella enterica subsp. enterica; 
#=GS A0A3V9KWN5/210-350  AC A0A3V9KWN5
#=GS A0A3V9KWN5/210-350  OS Salmonella enterica subsp. enterica serovar 4,5,12:b:-
#=GS A0A3V9KWN5/210-350  DE SPI-2 type III secretion system apparatus protein SsaU
#=GS A0A3V9KWN5/210-350  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella; Salmonella enterica; Salmonella enterica subsp. enterica; 
#=GS A0A3V8MFT2/210-350  AC A0A3V8MFT2
#=GS A0A3V8MFT2/210-350  OS Salmonella enterica subsp. enterica serovar Typhimurium str. CFSAN000648
#=GS A0A3V8MFT2/210-350  DE SPI-2 type III secretion system apparatus protein SsaU
#=GS A0A3V8MFT2/210-350  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella; Salmonella enterica; Salmonella enterica subsp. enterica; 
#=GS A0A3Z2F237/210-350  AC A0A3Z2F237
#=GS A0A3Z2F237/210-350  OS Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1
#=GS A0A3Z2F237/210-350  DE SPI-2 type III secretion system apparatus protein SsaU
#=GS A0A3Z2F237/210-350  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella; Salmonella enterica; Salmonella enterica subsp. enterica; 
#=GS A0A0F6B114/210-350  AC A0A0F6B114
#=GS A0A0F6B114/210-350  OS Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S
#=GS A0A0F6B114/210-350  DE Secretion system apparatus protein SsaU
#=GS A0A0F6B114/210-350  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella; Salmonella enterica; Salmonella enterica subsp. enterica; 
#=GS A0A315GXN5/210-350  AC A0A315GXN5
#=GS A0A315GXN5/210-350  OS Salmonella enterica subsp. enterica serovar 4,[5],12:i:-
#=GS A0A315GXN5/210-350  DE SPI-2 type III secretion system apparatus protein SsaU
#=GS A0A315GXN5/210-350  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella; Salmonella enterica; Salmonella enterica subsp. enterica; 
#=GS A0A2R4DBP1/210-350  AC A0A2R4DBP1
#=GS A0A2R4DBP1/210-350  OS Salmonella enterica subsp. enterica serovar Concord
#=GS A0A2R4DBP1/210-350  DE SPI-2 type III secretion system apparatus protein SsaU
#=GS A0A2R4DBP1/210-350  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella; Salmonella enterica; Salmonella enterica subsp. enterica; 
#=GS E8XHB7/210-350      AC E8XHB7
#=GS E8XHB7/210-350      OS Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74
#=GS E8XHB7/210-350      DE Secretion system apparatus protein SsaU
#=GS E8XHB7/210-350      DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella; Salmonella enterica; Salmonella enterica subsp. enterica; 
#=GS A0A3Z1EAZ2/210-350  AC A0A3Z1EAZ2
#=GS A0A3Z1EAZ2/210-350  OS Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7
#=GS A0A3Z1EAZ2/210-350  DE SPI-2 type III secretion system apparatus protein SsaU
#=GS A0A3Z1EAZ2/210-350  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella; Salmonella enterica; Salmonella enterica subsp. enterica; 
#=GS A0A0H3NCS1/210-350  AC A0A0H3NCS1
#=GS A0A0H3NCS1/210-350  OS Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344
#=GS A0A0H3NCS1/210-350  DE Type III secretion system protein
#=GS A0A0H3NCS1/210-350  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella; Salmonella enterica; Salmonella enterica subsp. enterica; 
#=GS A0A402MMY8/210-350  AC A0A402MMY8
#=GS A0A402MMY8/210-350  OS Salmonella enterica subsp. enterica serovar Braenderup str. CFSAN001740
#=GS A0A402MMY8/210-350  DE SPI-2 type III secretion system apparatus protein SsaU
#=GS A0A402MMY8/210-350  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella; Salmonella enterica; Salmonella enterica subsp. enterica; 
#=GS A0A486X6S3/210-350  AC A0A486X6S3
#=GS A0A486X6S3/210-350  OS Salmonella enterica subsp. enterica serovar Stanley
#=GS A0A486X6S3/210-350  DE Type III secretion inner membrane protein (YscU,SpaS,EscU,HrcU,SsaU, homologous to flagellar export components)
#=GS A0A486X6S3/210-350  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella; Salmonella enterica; Salmonella enterica subsp. enterica; 
#=GS A0A3R0DAH8/210-350  AC A0A3R0DAH8
#=GS A0A3R0DAH8/210-350  OS Salmonella enterica subsp. enterica serovar Infantis
#=GS A0A3R0DAH8/210-350  DE SPI-2 type III secretion system apparatus protein SsaU
#=GS A0A3R0DAH8/210-350  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella; Salmonella enterica; Salmonella enterica subsp. enterica; 
#=GS A0A0U1GNF7/210-350  AC A0A0U1GNF7
#=GS A0A0U1GNF7/210-350  OS Salmonella enterica subsp. enterica serovar Typhimurium str. DT104
#=GS A0A0U1GNF7/210-350  DE Secretion system apparatus protein SsaU
#=GS A0A0U1GNF7/210-350  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella; Salmonella enterica; Salmonella enterica subsp. enterica; 
#=GS A0A3S4GYZ1/163-303  AC A0A3S4GYZ1
#=GS A0A3S4GYZ1/163-303  OS Salmonella enterica subsp. enterica serovar Sanjuan
#=GS A0A3S4GYZ1/163-303  DE Secretion system apparatus protein SsaU
#=GS A0A3S4GYZ1/163-303  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella; Salmonella enterica; Salmonella enterica subsp. enterica; 
#=GS A9MEJ7/210-350      AC A9MEJ7
#=GS A9MEJ7/210-350      OS Salmonella enterica subsp. arizonae serovar 62:z4,z23:-
#=GS A9MEJ7/210-350      DE Uncharacterized protein
#=GS A9MEJ7/210-350      DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella; Salmonella enterica; Salmonella enterica subsp. arizonae; 
#=GS A0A3K9AET1/210-350  AC A0A3K9AET1
#=GS A0A3K9AET1/210-350  OS Salmonella enterica
#=GS A0A3K9AET1/210-350  DE EscU/YscU/HrcU family type III secretion system export apparatus switch protein
#=GS A0A3K9AET1/210-350  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella; Salmonella enterica; 
#=GS A0A3V8P240/210-350  AC A0A3V8P240
#=GS A0A3V8P240/210-350  OS Salmonella enterica subsp. arizonae serovar 41:z4,z23:- str. 01-0089
#=GS A0A3V8P240/210-350  DE EscU/YscU/HrcU family type III secretion system export apparatus switch protein
#=GS A0A3V8P240/210-350  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella; Salmonella enterica; Salmonella enterica subsp. arizonae; 
#=GS A0A379S5X0/210-350  AC A0A379S5X0
#=GS A0A379S5X0/210-350  OS Salmonella enterica subsp. arizonae
#=GS A0A379S5X0/210-350  DE EscU/YscU/HrcU family type III secretion system export apparatus switch protein
#=GS A0A379S5X0/210-350  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella; Salmonella enterica; Salmonella enterica subsp. arizonae; 
#=GS A0A3S5YKV5/210-350  AC A0A3S5YKV5
#=GS A0A3S5YKV5/210-350  OS Salmonella enterica subsp. arizonae serovar 18:z4,z23:- str. CVM N26626
#=GS A0A3S5YKV5/210-350  DE Secretion system apparatus protein SsaU
#=GS A0A3S5YKV5/210-350  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella; Salmonella enterica; Salmonella enterica subsp. arizonae; 
#=GS A0A3X1TP48/155-295  AC A0A3X1TP48
#=GS A0A3X1TP48/155-295  OS Salmonella enterica
#=GS A0A3X1TP48/155-295  DE EscU/YscU/HrcU family type III secretion system export apparatus switch protein
#=GS A0A3X1TP48/155-295  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella; Salmonella enterica; 
#=GF SQ 27
P96069/210-350              RKDLKMSKDDVKQEHKDLEGDPQMKTRRREMQSEIQSGSLAQSVKQSVAVVRNPTHIAVCLGYHPTDMPIPRVLEKGSDAQANYIVNIAERNCIPVVENVELARSLFFEVERGDKIPETLFEPVAALLRMVMKIDYAHSTE
A0A0W3TM49/210-350          RKDLKMSKDDVKQEHKDLEGDPQMKTRRREMQSEIQSGSLAQSVKQSVAVVRNPTHIAVCLGYHPTDMPIPRVLEKGSDAQANYIVNIAERNCIPVVENVELARSLFFEVERGDKIPETLFEPVAALLRMVMKIDYAHSTE
A0A2X4TD72/110-250          RKDLKMSKDDVKQEHKDLEGDPQMKTRRREMQSEIQSGSLAQSVKQSVAVVRNPTHIAVCLGYHPTDMPIPRVLEKGSDAQANYIVNIAERNCIPVVENVDLARSLFFEVERGDKIPETLFEPVAALLRMVMKIDYAHSTE
A0A3T0CBQ1/210-350          RKDLKMSKDDVKQEHKDLEGDPQMKTRRREMQSEIQSGSLAQSVKQSVAVVRNPTHIAVCLGYHPTDMPIPRVLEKGSDAQANYIVNIAERNCIPVVENVELARSLFFEVERGDKIPETLFEPVAALLRMVMKIDYAHSTE
A0A0C5PP61/210-350          RKDLKMSKDDVKQEHKDLEGDPQMKTRRREMQSEIQSGSLAQSVKQSVAVVRNPTHIAVCLGYHPTDMPIPRVLEKGSDAQANYIVNIAERNCIPVVENVELARSLFFEVERGDKIPETLFEPVAALLRMVMKIDYAHSTE
A0A3R8SI56/210-350          RKDLKMSKDDVKQEHKDLEGDPQMKTRRREMQSEIQSGSLAQSVKQSVAVVRNPTHIAVCLGYHPTDMPIPRVLEKGSDAQANYIVNIAERNCIPVVENVELARSLFFEVERGDKIPETLFEPVAALLRMVMKIDYAHSTE
A0A3V2FVS0/210-350          RKDLKMSKDDVKQEHKDLEGDPQMKTRRREMQSEIQSGSLAQSVKQSVAVVRNPTHIAVCLGYHPTDMPIPRVLEKGSDAQANYIVNIAERNCIPVVENVELARSLFFEVERGDKIPETLFEPVAALLRMVMKIDYAHSTE
A0A3V9KWN5/210-350          RKDLKMSKDDVKQEHKDLEGDPQMKTRRREMQSEIQSGSLAQSVKQSVAVVRNPTHIAVCLGYHPTDMPIPRVLEKGSDAQANYIVNIAERNCIPVVENVELARSLFFEVERGDKIPETLFEPVAALLRMVMKIDYAHSTE
A0A3V8MFT2/210-350          RKDLKMSKDDVKQEHKDLEGDPQMKTRRREMQSEIQSGSLAQSVKQSVAVVRNPTHIAVCLGYHPTDMPIPRVLEKGSDAQANYIVNIAERNCIPVVENVELARSLFFEVERGDKIPETLFEPVAALLRMVMKIDYAHSTE
A0A3Z2F237/210-350          RKDLKMSKDDVKQEHKDLEGDPQMKTRRREMQSEIQSGSLAQSVKQSVAVVRNPTHIAVCLGYHPTDMPIPRVLEKGSDAQANYIVNIAERNCIPVVENVELARSLFFEVERGDKIPETLFEPVAALLRMVMKIDYAHSTE
A0A0F6B114/210-350          RKDLKMSKDDVKQEHKDLEGDPQMKTRRREMQSEIQSGSLAQSVKQSVAVVRNPTHIAVCLGYHPTDMPIPRVLEKGSDAQANYIVNIAERNCIPVVENVELARSLFFEVERGDKIPETLFEPVAALLRMVMKIDYAHSTE
A0A315GXN5/210-350          RKDLKMSKDDVKQEHKDLEGDPQMKTRRREMQSEIQSGSLAQSVKQSVAVVRNPTHIAVCLGYHPTDMPIPRVLEKGSDAQANYIVNIAERNCIPVVENVELARSLFFEVERGDKIPETLFEPVAALLRMVMKIDYAHSTE
A0A2R4DBP1/210-350          RKDLKMSKDDVKQEHKDLEGDPQMKTRRREMQSEIQSGSLAQSVKQSVAVVRNPTHIAVCLGYHPTDMPIPRVLEKGSDAQANYIVNIAERNCIPVVENVELARSLFFEVERGDKIPETLFEPVAALLRMVMKIDYAHSTE
E8XHB7/210-350              RKDLKMSKDDVKQEHKDLEGDPQMKTRRREMQSEIQSGSLAQSVKQSVAVVRNPTHIAVCLGYHPTDMPIPRVLEKGSDAQANYIVNIAERNCIPVVENVELARSLFFEVERGDKIPETLFEPVAALLRMVMKIDYAHSTE
A0A3Z1EAZ2/210-350          RKDLKMSKDDVKQEHKDLEGDPQMKTRRREMQSEIQSGSLAQSVKQSVAVVRNPTHIAVCLGYHPTDMPIPRVLEKGSDAQANYIVNIAERNCIPVVENVELARSLFFEVERGDKIPETLFEPVAALLRMVMKIDYAHSTE
A0A0H3NCS1/210-350          RKDLKMSKDDVKQEHKDLEGDPQMKTRRREMQSEIQSGSLAQSVKQSVAVVRNPTHIAVCLGYHPTDMPIPRVLEKGSDAQANYIVNIAERNCIPVVENVELARSLFFEVERGDKIPETLFEPVAALLRMVMKIDYAHSTE
A0A402MMY8/210-350          RKDLKMSKDDVKQEHKDLEGDPQMKTRRREMQSEIQSGSLAQSVKQSVAVVRNPTHIAVCLGYHPTDMPIPRVLEKGSDAQANYIVNIAERNCIPVVENVELARSLFFEVERGDKIPETLFEPVAALLRMVMKIDYAHSTE
A0A486X6S3/210-350          RKDLKMSKDDVKQEHKDLEGDPQMKTRRREMQSEIQSGSLAQSVKQSVAVVRNPTHIAVCLGYHPTDMPIPRVLEKGSDAQANYIVNIAERNCIPVVENVELARSLFFEVERGDKIPETLFEPVAALLRMVMKIDYAHSTE
A0A3R0DAH8/210-350          RKDLKMSKDDVKQEHKDLEGDPQMKTRRREMQSEIQSGSLAQSVKQSVAVVRNPTHIAVCLGYHPTDMPIPRVLEKGSDAQANYIVNIAERNCIPVVENVELARSLFFEVERGDKIPETLFEPVAALLRMVMKIDYAHSTE
A0A0U1GNF7/210-350          RKDLKMSKDDVKQEHKDLEGDPQMKTRRREMQSEIQSGSLAQSVKQSVAVVRNPTHIAVCLGYHPTDMPIPRVLEKGSDAQANYIVNIAERNCIPVVENVELARSLFFEVERGDKIPETLFEPVAALLRMVMKIDYAHSTE
A0A3S4GYZ1/163-303          RKDLKMSKDDVKQENKDLEGDPQMKTRRREMQSEIQSGSLAQSVKQSVAVVRNPTHIAVCLGYHPTDMPIPRVLEKGSDAQANYIVNIAERNCIPVVENVELARSLFFEVERGDKIPETLFEPVAALLRMVMKIDYAHSTE
A9MEJ7/210-350              RKDLKMSKDDVKQEHKDLEGDPQMKTRRREMQSEIQSGSLAQSVKQSVAVVRNPTHIAVCLGYHPTDMPIPRVLEKGSDAQANYIVNIAERNCIPVVENVDLARSLFFEVERGDKIPETLFEPVAALLRMVMKIDYAHSTE
A0A3K9AET1/210-350          RKDLKMSKDDVKQEHKDLEGDPQMKTRRREMQSEIQSGSLAQSVKQSVAVVRNPTHIAVCLGYHPTDMPIPRVLEKGSDAQANYIVNIAERNCIPVVENVDLARSLFFEVERGDKIPETLFEPVAALLRMVMKIDYAHSTE
A0A3V8P240/210-350          RKDLKMSKDDVKQEHKDLEGDPQMKTRRREMQSEIQSGSLAQSVKQSVAVVRNPTHIAVCLGYHPTDMPIPRVLEKGSDAQANYIVNIAERNCIPVVENVDLARSLFFEVERGDKIPETLFEPVAALLRMVMKIDYAHSTE
A0A379S5X0/210-350          RKDLKMSKDDVKQEHKDLEGDPQMKTRRREMQSEIQSGSLAQSVKQSVAVVRNPTHIAVCLGYHPTDMPIPRVLEKGSDAQANYIVNIAERNCIPVVENVDLARSLFFEVERGDKIPETLFEPVAALLRMVMKIDYAHSTE
A0A3S5YKV5/210-350          RKDLKMSKDDVKQEHKDLEGDPQMKTRRREMQSEIQSGSLAQSVKQSVAVVRNPTHIAVCLGYHPTDMPIPRVLEKGSDAQANYIVNIAERNCIPVVENVDLARSLFFEVERGDKIPETLFEPVAALLRMVMKIDYAHSTE
A0A3X1TP48/155-295          RKDLKMSKDDVKQEHKDLEGDPQMKTRRREMQSEIQSGSLAQSVKQSVAVVRNPTHIAVCLGYHPTDMPIPRVLEKGSDAQANYIVNIAERNCIPVVENVELARSLFFEVERGDKIPETLFEPVAALLRMVMKIDYAHSTE
#=GC scorecons              999999999999997999999999999999999999999999999999999999999999999999999999999999999999999999999999999979999999999999999999999999999999999999999
#=GC scorecons_70           *********************************************************************************************************************************************
#=GC scorecons_80           ****************************************************************************************************_****************************************
#=GC scorecons_90           **************_*************************************************************************************_****************************************
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