# STOCKHOLM 1.0
#=GF ID 3.30.890.10/FF/000009
#=GF DE Methyl-CpG binding domain protein 4
#=GF AC 3.30.890.10/FF/000009
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 84.076
#=GS Q9VGA4/441-537      AC Q9VGA4
#=GS Q9VGA4/441-537      OS Drosophila melanogaster
#=GS Q9VGA4/441-537      DE MBD-R2
#=GS Q9VGA4/441-537      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila melanogaster; 
#=GS Q9VGA4/441-537      DR GO; GO:0000785; GO:0005515; GO:0005634; GO:0005700; GO:0005705; GO:0035327; GO:0044545; GO:0045944; GO:1990841; 
#=GS Q7KSN0/353-449      AC Q7KSN0
#=GS Q7KSN0/353-449      OS Drosophila melanogaster
#=GS Q7KSN0/353-449      DE SD10773p
#=GS Q7KSN0/353-449      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila melanogaster; 
#=GS Q7KSN0/353-449      DR GO; GO:0005634; GO:0005705; GO:0035327; GO:0044545; GO:0045944; 
#=GS H2M5X2/2-110        AC H2M5X2
#=GS H2M5X2/2-110        OS Oryzias latipes
#=GS H2M5X2/2-110        DE Uncharacterized protein
#=GS H2M5X2/2-110        DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Euteleosteomorpha; Atherinomorphae; Beloniformes; Adrianichthyoidei; Adrianichthyidae; Oryziinae; Oryzias; Oryzias latipes; 
#=GS F7D9K1/49-126       AC F7D9K1
#=GS F7D9K1/49-126       OS Xenopus tropicalis
#=GS F7D9K1/49-126       DE Methyl-CpG-binding domain 4, DNA glycosylase
#=GS F7D9K1/49-126       DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana; Xenopus tropicalis; 
#=GS W5N616/2-97         AC W5N616
#=GS W5N616/2-97         OS Lepisosteus oculatus
#=GS W5N616/2-97         DE Uncharacterized protein
#=GS W5N616/2-97         DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Holostei; Semionotiformes; Lepisosteidae; Lepisosteus; Lepisosteus oculatus; 
#=GS A0A1W4UN34/443-541  AC A0A1W4UN34
#=GS A0A1W4UN34/443-541  OS Drosophila ficusphila
#=GS A0A1W4UN34/443-541  DE uncharacterized protein LOC108088019
#=GS A0A1W4UN34/443-541  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; ficusphila subgroup; Drosophila ficusphila; 
#=GS B3LZL0/449-545      AC B3LZL0
#=GS B3LZL0/449-545      OS Drosophila ananassae
#=GS B3LZL0/449-545      DE Uncharacterized protein
#=GS B3LZL0/449-545      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; ananassae subgroup; Drosophila ananassae; 
#=GS B3P1D6/439-537      AC B3P1D6
#=GS B3P1D6/439-537      OS Drosophila erecta
#=GS B3P1D6/439-537      DE GG17141
#=GS B3P1D6/439-537      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila erecta; 
#=GS B4PNQ6/441-539      AC B4PNQ6
#=GS B4PNQ6/441-539      OS Drosophila yakuba
#=GS B4PNQ6/441-539      DE Uncharacterized protein
#=GS B4PNQ6/441-539      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila yakuba; 
#=GS A0A3P9I3I3/1-110    AC A0A3P9I3I3
#=GS A0A3P9I3I3/1-110    OS Oryzias latipes
#=GS A0A3P9I3I3/1-110    DE Methyl-CpG binding domain protein 4
#=GS A0A3P9I3I3/1-110    DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Euteleosteomorpha; Atherinomorphae; Beloniformes; Adrianichthyoidei; Adrianichthyidae; Oryziinae; Oryzias; Oryzias latipes; 
#=GS A0A3P9MLR5/1-110    AC A0A3P9MLR5
#=GS A0A3P9MLR5/1-110    OS Oryzias latipes
#=GS A0A3P9MLR5/1-110    DE Methyl-CpG binding domain protein 4
#=GS A0A3P9MLR5/1-110    DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Euteleosteomorpha; Atherinomorphae; Beloniformes; Adrianichthyoidei; Adrianichthyidae; Oryziinae; Oryzias; Oryzias latipes; 
#=GF SQ 11
Q9VGA4/441-537              -GEHQ-KPTVIVQDWRLPPGWIKHMYQR--SNVLGKWDVILVSPSGKRFRSKSDLKLFL-ESQNLVYNPDVYDFSIH------------------RRRAKDINAYVYTHGYNPQPPPKPR--
Q7KSN0/353-449              -GEHQ-KPTVIVQDWRLPPGWIKHMYQR--SNVLGKWDVILVSPSGKRFRSKSDLKLFL-ESQNLVYNPDVYDFSIH------------------RRRAKDINAYVYTHGYNPQPPPKPR--
H2M5X2/2-110                -KNHKDKPCCSSL---MPPGWNKVVKQRKTGKTAGKLDVYITSPSGLTFRSKASLQAFLVNSEEENLNLSLFEFTSA-KDKSTTSEALPLSQKQRRRRKKQTDAHQEKAGEKPC--------
F7D9K1/49-126               ----------IRS---LPQGWKRIVKQRQSGKTSGKYDVYFVSPQGTTLRSRISLAKYLNNNKEMNLKLEDFDFSVPDQSQK-----------QRTKKETYR--------------------
W5N616/2-97                 ------ETCCCLG---VPPGWVKMVKQRRSGKTAGKVDVYIISPQGGKFRSRASLHVYLQNNKELCLKGADFDFSVPGKDKQ-------LTKPQRTKKKKALQLSETVLDST----------
A0A1W4UN34/443-541          -GEHQ-KPTVIVQDWRLPPGWIKHMYQR--SNVLGKWDVILVSPSGKRFRSKSDLKLFL-ESQDLVYNPDVYDFSIH------------------RRRAKDINAYVYTHDYNPQPPPKTRPL
B3LZL0/449-545              -GEHQ-KPTVIVEDWRLPPGWIKHMYQR--SNVLGKWDVILVSPSGKRFRSKSDLKVFL-ESQGQIYNPDIYDFSIH------------------RRRAKDINAYVYTHDYNPQPPPKPK--
B3P1D6/439-537              -GEHQ-KPTVIVQDWRLPPGWIKHMYQR--SNVLGKWDVILVSPSGKRFRSKSDLKLFL-ESQNLVYNPDVYDFSIH------------------RRRAKDINAYVYTHDYNPQPPPKPKAM
B4PNQ6/441-539              -GEHQ-KPTVIVQDWRLPPGWIKHMYQR--SNVLGKWDVILVSPSGKRFRSKSDLKLFL-ESQNLVYNPDVYDFSIH------------------RRRAKDINAYVYTHDYNPQPPPKPRTM
A0A3P9I3I3/1-110            MKNHKDEPCCSSL---MPPGWIKVVKQRKTGKTAGKLDVYITSPSGLTFRSKASLQAFLVNSEEENLNISLFEFTTA-KDKSTTSEALPLSQKQRRRRKKQTDAHQEKAGEKPC--------
A0A3P9MLR5/1-110            MKNHKDEPCCSSL---MPPGWIKVVKQRKTGKTAGKLDVYITSPSGLTFRSKASLQAFLVNSEEENLNLSLFEFTTA-KDKSTTSEALPLSQKQRRRRKKQTDAHQEKAGEKPC--------
#=GC scorecons              02343045334331116979958364991166549939955599693479975594379166553456443779654011110000000100022677474445432334234211111100
#=GC scorecons_70           _________________****_*_*_**______**_**___**_*__****__*__**__*_____*___****_____________________**_*______________________
#=GC scorecons_80           _________________****_*___**______**_**___**_*__****__*__**____________***______________________**_*______________________
#=GC scorecons_90           _________________*_**_____**______**_**___**_*___**___*___*______________*________________________________________________
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