# STOCKHOLM 1.0 #=GF ID 3.30.70.660/FF/000010 #=GF DE tRNA pseudouridine synthase #=GF AC 3.30.70.660/FF/000010 #=GF TP FunFam #=GF DR CATH: v4.3 #=GF DR DOPS: 76.259 #=GS Q9C5K6/218-398 AC Q9C5K6 #=GS Q9C5K6/218-398 OS Arabidopsis thaliana #=GS Q9C5K6/218-398 DE tRNA pseudouridine synthase #=GS Q9C5K6/218-398 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana; #=GS Q9C5K6/218-398 DR GO; GO:0009982; #=GS A9TEF9/411-585 AC A9TEF9 #=GS A9TEF9/411-585 OS Physcomitrella patens #=GS A9TEF9/411-585 DE Predicted protein #=GS A9TEF9/411-585 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Bryopsida; Funariidae; Funariales; Funariaceae; Physcomitrella; Physcomitrella patens; #=GS A0A0P0VYX7/137-305 AC A0A0P0VYX7 #=GS A0A0P0VYX7/137-305 OS Oryza sativa Japonica Group #=GS A0A0P0VYX7/137-305 DE tRNA pseudouridine synthase #=GS A0A0P0VYX7/137-305 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa; #=GS F6HJC9/232-419 AC F6HJC9 #=GS F6HJC9/232-419 OS Vitis vinifera #=GS F6HJC9/232-419 DE tRNA pseudouridine synthase #=GS F6HJC9/232-419 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Vitales; Vitaceae; Viteae; Vitis; Vitis vinifera; #=GS D2A375/169-361 AC D2A375 #=GS D2A375/169-361 OS Tribolium castaneum #=GS D2A375/169-361 DE tRNA pseudouridine synthase #=GS D2A375/169-361 DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Coleoptera; Polyphaga; Cucujiformia; Tenebrionoidea; Tenebrionidae; Tribolium; Tribolium castaneum; #=GS K7LKT0/212-381 AC K7LKT0 #=GS K7LKT0/212-381 OS Glycine max #=GS K7LKT0/212-381 DE tRNA pseudouridine synthase #=GS K7LKT0/212-381 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja; Glycine max; #=GS V4KTM6/218-402 AC V4KTM6 #=GS V4KTM6/218-402 OS Eutrema salsugineum #=GS V4KTM6/218-402 DE tRNA pseudouridine synthase #=GS V4KTM6/218-402 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Eutremeae; Eutrema; Eutrema salsugineum; #=GS A0A1J3IEK5/259-448 AC A0A1J3IEK5 #=GS A0A1J3IEK5/259-448 OS Noccaea caerulescens #=GS A0A1J3IEK5/259-448 DE tRNA pseudouridine synthase #=GS A0A1J3IEK5/259-448 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Coluteocarpeae; Noccaea; Noccaea caerulescens; #=GS B4FYI2/241-414 AC B4FYI2 #=GS B4FYI2/241-414 OS Zea mays #=GS B4FYI2/241-414 DE tRNA pseudouridine synthase #=GS B4FYI2/241-414 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Tripsacinae; Zea; Zea mays; #=GS A0A151S8E9/136-313 AC A0A151S8E9 #=GS A0A151S8E9/136-313 OS Cajanus cajan #=GS A0A151S8E9/136-313 DE tRNA pseudouridine synthase #=GS A0A151S8E9/136-313 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus; Cajanus cajan; #=GS C5WYL0/243-416 AC C5WYL0 #=GS C5WYL0/243-416 OS Sorghum bicolor #=GS C5WYL0/243-416 DE tRNA pseudouridine synthase #=GS C5WYL0/243-416 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Sorghinae; Sorghum; Sorghum bicolor; #=GS A0A0E0NVU5/210-376 AC A0A0E0NVU5 #=GS A0A0E0NVU5/210-376 OS Oryza rufipogon #=GS A0A0E0NVU5/210-376 DE tRNA pseudouridine synthase #=GS A0A0E0NVU5/210-376 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza rufipogon; #=GS A0A0D3FJ62/210-376 AC A0A0D3FJ62 #=GS A0A0D3FJ62/210-376 OS Oryza barthii #=GS A0A0D3FJ62/210-376 DE tRNA pseudouridine synthase #=GS A0A0D3FJ62/210-376 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza barthii; #=GS V4MP24/218-402 AC V4MP24 #=GS V4MP24/218-402 OS Eutrema salsugineum #=GS V4MP24/218-402 DE tRNA pseudouridine synthase #=GS V4MP24/218-402 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Eutremeae; Eutrema; Eutrema salsugineum; #=GS A0A1D6K4J8/176-349 AC A0A1D6K4J8 #=GS A0A1D6K4J8/176-349 OS Zea mays #=GS A0A1D6K4J8/176-349 DE tRNA pseudouridine synthase #=GS A0A1D6K4J8/176-349 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Tripsacinae; Zea; Zea mays; #=GS B7ZX30/270-443 AC B7ZX30 #=GS B7ZX30/270-443 OS Zea mays #=GS B7ZX30/270-443 DE tRNA pseudouridine synthase #=GS B7ZX30/270-443 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Tripsacinae; Zea; Zea mays; #=GS A0A1D6K4I9/204-377 AC A0A1D6K4I9 #=GS A0A1D6K4I9/204-377 OS Zea mays #=GS A0A1D6K4I9/204-377 DE tRNA pseudouridine synthase #=GS A0A1D6K4I9/204-377 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Tripsacinae; Zea; Zea mays; #=GS K7LKT1/211-380 AC K7LKT1 #=GS K7LKT1/211-380 OS Glycine max #=GS K7LKT1/211-380 DE tRNA pseudouridine synthase #=GS K7LKT1/211-380 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja; Glycine max; #=GS K7LKT4/191-360 AC K7LKT4 #=GS K7LKT4/191-360 OS Glycine max #=GS K7LKT4/191-360 DE tRNA pseudouridine synthase #=GS K7LKT4/191-360 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja; Glycine max; #=GS K7LKT3/192-361 AC K7LKT3 #=GS K7LKT3/192-361 OS Glycine max #=GS K7LKT3/192-361 DE tRNA pseudouridine synthase #=GS K7LKT3/192-361 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja; Glycine max; #=GS K7N409/137-305 AC K7N409 #=GS K7N409/137-305 OS Glycine max #=GS K7N409/137-305 DE tRNA pseudouridine synthase #=GS K7N409/137-305 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja; Glycine max; #=GS A0A0R0HX66/191-359 AC A0A0R0HX66 #=GS A0A0R0HX66/191-359 OS Glycine max #=GS A0A0R0HX66/191-359 DE tRNA pseudouridine synthase #=GS A0A0R0HX66/191-359 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja; Glycine max; #=GS K7N408/212-380 AC K7N408 #=GS K7N408/212-380 OS Glycine max #=GS K7N408/212-380 DE tRNA pseudouridine synthase #=GS K7N408/212-380 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja; Glycine max; #=GS A0A0R0HX64/211-379 AC A0A0R0HX64 #=GS A0A0R0HX64/211-379 OS Glycine max #=GS A0A0R0HX64/211-379 DE tRNA pseudouridine synthase #=GS A0A0R0HX64/211-379 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja; Glycine max; #=GS K7LKT2/212-380 AC K7LKT2 #=GS K7LKT2/212-380 OS Glycine max #=GS K7LKT2/212-380 DE tRNA pseudouridine synthase #=GS K7LKT2/212-380 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja; Glycine max; #=GS A0A0R0HX59/192-360 AC A0A0R0HX59 #=GS A0A0R0HX59/192-360 OS Glycine max #=GS A0A0R0HX59/192-360 DE tRNA pseudouridine synthase #=GS A0A0R0HX59/192-360 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja; Glycine max; #=GF SQ 26 Q9C5K6/218-398 YAREYKYFFWRQNLNL-------------SAMDFAGKKFIGEHDFRNFCKMDVAN-VHCYTRRVTFFEVS--PCQNSHEGDQLCTFTMRGSAFLWHQIRCMVAVLFMIGQGVESVD--------VIDTLLDTKKTPRKPQYLLASEIPLVLRTCEFENVDFICSPGAAESLRSHFKNESLTYQLESVIYQEALRNCLPLSNNVST--------------- A9TEF9/411-585 -YREYKYFFIDDGLNIDVWTLIYAFNRQYNVMKFACKQFEGEHDFTNFCKMDAAN-VHNYMRTITHFDII--PSNEKWGGKSVWIMNVKGTAFLWHQVRCMAAVLFMVGAGHEKPT--------IVEELLDVKKIVRKPQYIMASETPLLLFHCGYQGLSFRCHPDAVKRLRLHLESLLQTSIVNSS--------------------------------- A0A0P0VYX7/137-305 -GREYKYLFWKGDLNI-------------SEMQKAALKFIGEHDYRNFCKMDAAN-VSNYRRHITDFNIS--AYDQRSNYDELWAITIKGSAFLWHQVRCMVAVLFLIGQGLETPC--------IVDSLLDITKTPRKPQYKMASEIPLILRSCLFDEVNFMCSSEASQALIEHLKDEYHQYMLQAAIFCEALS-------------------------- F6HJC9/232-419 -SREYKYFFWRGNLNI-------------LAMESAGKKFVGEHDFRNFCKMDAVN-VHNYRRHIISFEIA--PTNNRYDGNQLWAIKIKGSAFLWHQVRCMVAVLFMIGQGLESPD--------VVDALLDTERTSRKPQYAMAPEIPLVLESCEFEGLKFICSSDAGQALRMHLENECRTYQLQAAIFHEALLSCLPSANSAEKQN------SLNNGT- D2A375/169-361 KNRTYKYFFPKSNLDI-------------DAMKIAANYLVGTHDFRNFCKMDVNNGVVEFKRNILSVDISLFQEDERY---SIQVLTIKGNAFLWHQIRCIVGILILVGQGKEKPE--------VVLDLLDITRNPRKPDYHMASEIPLNLYDCHYDNVNWIYDKEALNIVKAKLYKFWMFSSIKTAMMKSMLVDLEKEASELDHDSIDFLIQGVKR--- K7LKT0/212-381 -SREYKYFFWKENLNI-------------QAMESAGNKLVGEHDFRNFCKMDAAN-VHNYRRRIKLFEIS--PTDVRYNDNQLWVIKIRGSAFLWHQVRCMVVVLFMVGKGLESPN--------VIDMLLDTARILRKPQYTMASEVPLVLQSCEFDNIKFMCSSEAGEALHVHLVNECQIYQLQAAIFHEALLN------------------------- V4KTM6/218-402 SAREYKYFFWRQNLNL-------------SAMDIAGKKFIGEHDFRNFCKMDVAN-VHCYTRRVTFFEVS--PCQNSHEGAQLCTFTMRGSAFLWHQVRAMVAVLFMIGQGVESVD--------VIDTMLDTTKIPRKPQYLLASEIPLVLRTCEFENVDFICSSGAAESLRTHFKNESLRYQLESVIFQEALRNCLPVGNEKSSCN------GV----- A0A1J3IEK5/259-448 SAREYKYFFWRQNLDL-------------SAMDTAGKKFLGEHDFRNFCKMDVAN-VHCYTRRVTFFEVS--PCQNSHEGAQLCTFTMRGSAFLWHQIRAMVAVLFMIGQGVESVD--------LIDTLLDTRKTPRKPQYLLASEIPLVLRTCEFENVDFICSSGAAESLRTHFKNESLRCQLESVIFQEALKNCLPLKNEKSSCN------GVEKKKK B4FYI2/241-414 LSREYKYLFWKGDLDI-------------LEMQKAASKFIGEHDFRNFCKMDAAN-VSNYRRHITEFTIS--ACDRRSNNDELCSMTIKGSAFLWHQVRCMVAVLFLIGQGLESPS--------VVDSLLDIMKTSRKPQYKMAPELPLILQSCLFDKANFMCSADASRSLTEHLNDEYRHHMLQAEIFHIASS-CLPF--------------------- A0A151S8E9/136-313 -SREYKYFFWKEQLNI-------------QAMENAGNKLVGEHDFRNFCKMDAAN-VHNYRRHIMLFDIS--PSDVRYNGNQLWVIKIRGSAFLWHQVRCMVAVLFMVGKGLESPNVVVVLNLKVIDMLLDTTRILRKPQYTMASEVPLVLQSCEFDDIKFMCSSDAGEALRVHLVNECQIYQLQAAVFHEALLN------------------------- C5WYL0/243-416 LSREYKYLFWKGDLDI-------------LEMQKAASKFIGEHDFRNFCKMDAAN-VSNYRRRITEFTIS--ACDRRSNNDELCSMMIKGSAFLWHQVRCMVAVLFLIGQGLESPS--------VVDSLLDITKTPRKPQYKMAPELPLILRSCLFDKANFMCSSDASQSLTEHFNDEYHHHMLQAEIFHIASS-CLPF--------------------- A0A0E0NVU5/210-376 ---EYKYLFWKGDLNI-------------SEMQKAAVKFIGEHDYRNFCKMDAAN-VSNYRRHITDFNIS--AYDQRSNYDELWAITIKGSAFLWHQVRCMVAVLFLIGQGLETPC--------IVDSLLDITKTPRKPQYKMASEIPLILRSCLFDEVNFMCSSEASQALIEHLKDEYHQYMLQAAIFCEALS-------------------------- A0A0D3FJ62/210-376 ---EYKYLFWKGDLNI-------------SEMQKAALKFIGEHDYRNFCKMDAAN-VSNFRRHITDFNIS--AYDQRSNYDELWAITIKGSAFLWHQVRCMVAVLFLIGQGLESPC--------IVDSLLDITKTPRKPQYKMASEIPLILRSCLFDEVNFMCSSEASQALIEHLKDEYHQYMLQAAIFCEALS-------------------------- V4MP24/218-402 SAREYKYFFWRQNLNL-------------SAMDIAGKKFIGEHDFRNFCKMDVAN-VHCYTRRVTFFEVS--PCQNSHEGAQLCTFTMRGSAFLWHQVRAMVAVLFMIGQGVESVD--------VIDTMLDTTKIPRKPQYLLASEIPLVLRTCEFENVDFICSSGAAESLRTHFKNESLRYQLESVIFQEALRNCLPVGNEKSSCN------GV----- A0A1D6K4J8/176-349 LSREYKYLFWKGDLDI-------------LEMQKAASKFIGEHDFRNFCKMDAAN-VSNYRRHITEFTIS--ACDRRSNNDELCSMTIKGSAFLWHQVRCMVAVLFLIGQGLESPS--------VVDSLLDIMKTSRKPQYKMAPELPLILQSCLFDKANFMCSADASRSLTEHLNDEYRHHMLQAEIFHIASS-CLPF--------------------- B7ZX30/270-443 LSREYKYLFWKGDLDI-------------LEMQKAASKFIGEHDFRNFCKMDAAN-VSNYRRHITEFTIS--ACDRRSNNDELCSMTIKGSAFLWHQVRCMVAVLFLIGQGLESPS--------VVDSLLDIMKTSRKPQYKMAPELPLILQSCLFDKANFMCSADASRSLTEHLNDEYRHHMLQAEIFHIASS-CLPF--------------------- A0A1D6K4I9/204-377 LSREYKYLFWKGDLDI-------------LEMQKAASKFIGEHDFRNFCKMDAAN-VSNYRRHITEFTIS--ACDRRSNNDELCSMTIKGSAFLWHQVRCMVAVLFLIGQGLESPS--------VVDSLLDIMKTSRKPQYKMAPELPLILQSCLFDKANFMCSADASRSLTEHLNDEYRHHMLQAEIFHIASS-CLPF--------------------- K7LKT1/211-380 -SREYKYFFWKENLNI-------------QAMESAGNKLVGEHDFRNFCKMDAAN-VHNYRRRIKLFEIS--PTDVRYNDNQLWVIKIRGSAFLWHQVRCMVVVLFMVGKGLESPN--------VIDMLLDTARILRKPQYTMASEVPLVLQSCEFDNIKFMCSSEAGEALHVHLVNECQIYQLQAAIFHEALLN------------------------- K7LKT4/191-360 -SREYKYFFWKENLNI-------------QAMESAGNKLVGEHDFRNFCKMDAAN-VHNYRRRIKLFEIS--PTDVRYNDNQLWVIKIRGSAFLWHQVRCMVVVLFMVGKGLESPN--------VIDMLLDTARILRKPQYTMASEVPLVLQSCEFDNIKFMCSSEAGEALHVHLVNECQIYQLQAAIFHEALLN------------------------- K7LKT3/192-361 -SREYKYFFWKENLNI-------------QAMESAGNKLVGEHDFRNFCKMDAAN-VHNYRRRIKLFEIS--PTDVRYNDNQLWVIKIRGSAFLWHQVRCMVVVLFMVGKGLESPN--------VIDMLLDTARILRKPQYTMASEVPLVLQSCEFDNIKFMCSSEAGEALHVHLVNECQIYQLQAAIFHEALLN------------------------- K7N409/137-305 -SREYKYFFWKENLNI-------------PAIEVAGNKLVGEHDFRNFCKMDAAN-VHNYRRCITLFEIS--STDVRYNDNQLWVIKIRGSAFLWHQVRCMVAVLFMVGKGLESPN--------VIDMLLDTSRILRKPQYTMASEVPLVLQSCEFDNIKFMCSSDAGEALRVHLVNECQIYQLQAAIFHEALL-------------------------- A0A0R0HX66/191-359 -SREYKYFFWKENLNI-------------QAMESAGNKLVGEHDFRNFCKMDAAN-VHNYRRRIKLFEIS--PTDVRYNDNQLWVIKIRGSAFLWHQVRCMVVVLFMVGKGLESPN--------VIDMLLDTARILRKPQYTMASEVPLVLQSCEFDNIKFMCSSEAGEALHVHLVNECQIYQLQAAIFHEALL-------------------------- K7N408/212-380 -SREYKYFFWKENLNI-------------PAIEVAGNKLVGEHDFRNFCKMDAAN-VHNYRRCITLFEIS--STDVRYNDNQLWVIKIRGSAFLWHQVRCMVAVLFMVGKGLESPN--------VIDMLLDTSRILRKPQYTMASEVPLVLQSCEFDNIKFMCSSDAGEALRVHLVNECQIYQLQAAIFHEALL-------------------------- A0A0R0HX64/211-379 -SREYKYFFWKENLNI-------------QAMESAGNKLVGEHDFRNFCKMDAAN-VHNYRRRIKLFEIS--PTDVRYNDNQLWVIKIRGSAFLWHQVRCMVVVLFMVGKGLESPN--------VIDMLLDTARILRKPQYTMASEVPLVLQSCEFDNIKFMCSSEAGEALHVHLVNECQIYQLQAAIFHEALL-------------------------- K7LKT2/212-380 -SREYKYFFWKENLNI-------------QAMESAGNKLVGEHDFRNFCKMDAAN-VHNYRRRIKLFEIS--PTDVRYNDNQLWVIKIRGSAFLWHQVRCMVVVLFMVGKGLESPN--------VIDMLLDTARILRKPQYTMASEVPLVLQSCEFDNIKFMCSSEAGEALHVHLVNECQIYQLQAAIFHEALL-------------------------- A0A0R0HX59/192-360 -SREYKYFFWKENLNI-------------QAMESAGNKLVGEHDFRNFCKMDAAN-VHNYRRRIKLFEIS--PTDVRYNDNQLWVIKIRGSAFLWHQVRCMVVVLFMVGKGLESPN--------VIDMLLDTARILRKPQYTMASEVPLVLQSCEFDNIKFMCSSEAGEALHVHLVNECQIYQLQAAIFHEALL-------------------------- #=GC scorecons 0478999696646967000000000000035853954766989988999999679095685957538577005463645345754557797999999797886898679695966400000000777489954754999893796959969559487555868756945584387356443647665765465311110000000000000000000000 #=GC scorecons_70 __*********__***_______________*__*__**_***************_*__*_*_*__*_**____*_*_____*____**********************_*_***_________***_***__*__*****_****_**_*__*_**___****__*___*__**__*_____***_**__*____________________________ #=GC scorecons_80 __*****_*____*_*_______________*__*__*__************_**_*__*_*_*__*_**____________*____*_*************_***__*_*_*___________*_*_***_____*****_**_*_**_*__*_*____*_**__*___*__**________*____________________________________ #=GC scorecons_90 ____***_*____*_________________*__*_____*_**********__*_*__*_*____*______________________*_******_*_**_***__*_*_*_______________***_____*****__*_*_**_*__*_*______*___*___*__*______________________________________________ //