# STOCKHOLM 1.0 #=GF ID 3.30.70.590/FF/000004 #=GF DE Poly(A) polymerase gamma #=GF AC 3.30.70.590/FF/000004 #=GF TP FunFam #=GF DR CATH: v4.3 #=GF DR DOPS: 85.723 #=GS Q9U2P3/362-484 AC Q9U2P3 #=GS Q9U2P3/362-484 OS Caenorhabditis elegans #=GS Q9U2P3/362-484 DE Poly-A Polymerase #=GS Q9U2P3/362-484 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis elegans; #=GS G5EBX5/369-481 AC G5EBX5 #=GS G5EBX5/369-481 OS Caenorhabditis elegans #=GS G5EBX5/369-481 DE Uncharacterized protein #=GS G5EBX5/369-481 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis elegans; #=GS Q09995/364-476 AC Q09995 #=GS Q09995/364-476 OS Caenorhabditis elegans #=GS Q09995/364-476 DE Uncharacterized protein #=GS Q09995/364-476 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis elegans; #=GS A7T589/363-480 AC A7T589 #=GS A7T589/363-480 OS Nematostella vectensis #=GS A7T589/363-480 DE Predicted protein #=GS A7T589/363-480 DR ORG; Eukaryota; Metazoa; Cnidaria; Anthozoa; Hexacorallia; Actiniaria; Edwardsiidae; Nematostella; Nematostella vectensis; #=GS A7RJ31/365-478 AC A7RJ31 #=GS A7RJ31/365-478 OS Nematostella vectensis #=GS A7RJ31/365-478 DE Predicted protein #=GS A7RJ31/365-478 DR ORG; Eukaryota; Metazoa; Cnidaria; Anthozoa; Hexacorallia; Actiniaria; Edwardsiidae; Nematostella; Nematostella vectensis; #=GS E9GI20/371-488 AC E9GI20 #=GS E9GI20/371-488 OS Daphnia pulex #=GS E9GI20/371-488 DE Uncharacterized protein #=GS E9GI20/371-488 DR ORG; Eukaryota; Metazoa; Arthropoda; Crustacea; Branchiopoda; Phyllopoda; Diplostraca; Cladocera; Anomopoda; Daphniidae; Daphnia; Daphnia pulex; #=GS H2ZD16/353-473 AC H2ZD16 #=GS H2ZD16/353-473 OS Ciona savignyi #=GS H2ZD16/353-473 DE Uncharacterized protein #=GS H2ZD16/353-473 DR ORG; Eukaryota; Metazoa; Chordata; Tunicata; Ascidiacea; Enterogona; Phlebobranchia; Cionidae; Ciona; Ciona savignyi; #=GS B7Q2V7/373-490 AC B7Q2V7 #=GS B7Q2V7/373-490 OS Ixodes scapularis #=GS B7Q2V7/373-490 DE Poly(A) polymerase, putative #=GS B7Q2V7/373-490 DR ORG; Eukaryota; Metazoa; Arthropoda; Chelicerata; Arachnida; Acari; Parasitiformes; Ixodida; Ixodoidea; Ixodidae; Ixodinae; Ixodes; Ixodes scapularis; #=GS H3EWD4/364-493 AC H3EWD4 #=GS H3EWD4/364-493 OS Pristionchus pacificus #=GS H3EWD4/364-493 DE Uncharacterized protein #=GS H3EWD4/364-493 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Diplogasteromorpha; Diplogasteroidea; Neodiplogasteridae; Pristionchus; Pristionchus pacificus; #=GS H2XJK0/355-476 AC H2XJK0 #=GS H2XJK0/355-476 OS Ciona intestinalis #=GS H2XJK0/355-476 DE Uncharacterized protein #=GS H2XJK0/355-476 DR ORG; Eukaryota; Metazoa; Chordata; Tunicata; Ascidiacea; Enterogona; Phlebobranchia; Cionidae; Ciona; Ciona intestinalis; #=GS L7M703/386-503 AC L7M703 #=GS L7M703/386-503 OS Rhipicephalus pulchellus #=GS L7M703/386-503 DE Putative polya polymerase #=GS L7M703/386-503 DR ORG; Eukaryota; Metazoa; Arthropoda; Chelicerata; Arachnida; Acari; Parasitiformes; Ixodida; Ixodoidea; Ixodidae; Rhipicephalinae; Rhipicephalus; Rhipicephalus; Rhipicephalus pulchellus; #=GS A0A023FN48/392-509 AC A0A023FN48 #=GS A0A023FN48/392-509 OS Amblyomma cajennense #=GS A0A023FN48/392-509 DE Putative polya polymerase #=GS A0A023FN48/392-509 DR ORG; Eukaryota; Metazoa; Arthropoda; Chelicerata; Arachnida; Acari; Parasitiformes; Ixodida; Ixodoidea; Ixodidae; Amblyomminae; Amblyomma; Amblyomma cajennense; #=GS A0A131XEQ0/382-499 AC A0A131XEQ0 #=GS A0A131XEQ0/382-499 OS Hyalomma excavatum #=GS A0A131XEQ0/382-499 DE Putative polya polymerase #=GS A0A131XEQ0/382-499 DR ORG; Eukaryota; Metazoa; Arthropoda; Chelicerata; Arachnida; Acari; Parasitiformes; Ixodida; Ixodoidea; Ixodidae; Hyalomminae; Hyalomma; Hyalomma excavatum; #=GS A8X8P1/362-500 AC A8X8P1 #=GS A8X8P1/362-500 OS Caenorhabditis briggsae #=GS A8X8P1/362-500 DE Protein CBR-PAP-1 #=GS A8X8P1/362-500 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis briggsae; #=GS A0A2H2I065/343-465 AC A0A2H2I065 #=GS A0A2H2I065/343-465 OS Caenorhabditis japonica #=GS A0A2H2I065/343-465 DE Uncharacterized protein #=GS A0A2H2I065/343-465 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis japonica; #=GS A0A0P6GF45/375-492 AC A0A0P6GF45 #=GS A0A0P6GF45/375-492 OS Daphnia magna #=GS A0A0P6GF45/375-492 DE Poly polymerase gamma #=GS A0A0P6GF45/375-492 DR ORG; Eukaryota; Metazoa; Arthropoda; Crustacea; Branchiopoda; Phyllopoda; Diplostraca; Cladocera; Anomopoda; Daphniidae; Daphnia; Daphnia magna; #=GS A0A1E1X5R5/387-504 AC A0A1E1X5R5 #=GS A0A1E1X5R5/387-504 OS Amblyomma aureolatum #=GS A0A1E1X5R5/387-504 DE Putative polya polymerase #=GS A0A1E1X5R5/387-504 DR ORG; Eukaryota; Metazoa; Arthropoda; Chelicerata; Arachnida; Acari; Parasitiformes; Ixodida; Ixodoidea; Ixodidae; Amblyomminae; Amblyomma; Amblyomma aureolatum; #=GS A0A2A6CS40/338-467 AC A0A2A6CS40 #=GS A0A2A6CS40/338-467 OS Pristionchus pacificus #=GS A0A2A6CS40/338-467 DE Pap-1 #=GS A0A2A6CS40/338-467 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Diplogasteromorpha; Diplogasteroidea; Neodiplogasteridae; Pristionchus; Pristionchus pacificus; #=GS A0A1W5BAU6/355-476 AC A0A1W5BAU6 #=GS A0A1W5BAU6/355-476 OS Ciona intestinalis #=GS A0A1W5BAU6/355-476 DE poly(A) polymerase beta isoform X3 #=GS A0A1W5BAU6/355-476 DR ORG; Eukaryota; Metazoa; Chordata; Tunicata; Ascidiacea; Enterogona; Phlebobranchia; Cionidae; Ciona; Ciona intestinalis; #=GS A0A0P6HH38/375-492 AC A0A0P6HH38 #=GS A0A0P6HH38/375-492 OS Daphnia magna #=GS A0A0P6HH38/375-492 DE Poly(A) polymerase gamma #=GS A0A0P6HH38/375-492 DR ORG; Eukaryota; Metazoa; Arthropoda; Crustacea; Branchiopoda; Phyllopoda; Diplostraca; Cladocera; Anomopoda; Daphniidae; Daphnia; Daphnia magna; #=GS A0A0P5I4X1/375-492 AC A0A0P5I4X1 #=GS A0A0P5I4X1/375-492 OS Daphnia magna #=GS A0A0P5I4X1/375-492 DE Poly(A) polymerase gamma #=GS A0A0P5I4X1/375-492 DR ORG; Eukaryota; Metazoa; Arthropoda; Crustacea; Branchiopoda; Phyllopoda; Diplostraca; Cladocera; Anomopoda; Daphniidae; Daphnia; Daphnia magna; #=GS A0A0P5FWR2/375-492 AC A0A0P5FWR2 #=GS A0A0P5FWR2/375-492 OS Daphnia magna #=GS A0A0P5FWR2/375-492 DE Poly(A) polymerase gamma #=GS A0A0P5FWR2/375-492 DR ORG; Eukaryota; Metazoa; Arthropoda; Crustacea; Branchiopoda; Phyllopoda; Diplostraca; Cladocera; Anomopoda; Daphniidae; Daphnia; Daphnia magna; #=GS A0A0N8AVD3/375-492 AC A0A0N8AVD3 #=GS A0A0N8AVD3/375-492 OS Daphnia magna #=GS A0A0N8AVD3/375-492 DE Poly(A) polymerase gamma #=GS A0A0N8AVD3/375-492 DR ORG; Eukaryota; Metazoa; Arthropoda; Crustacea; Branchiopoda; Phyllopoda; Diplostraca; Cladocera; Anomopoda; Daphniidae; Daphnia; Daphnia magna; #=GS L7MIN9/437-554 AC L7MIN9 #=GS L7MIN9/437-554 OS Rhipicephalus pulchellus #=GS L7MIN9/437-554 DE Putative polya polymerase #=GS L7MIN9/437-554 DR ORG; Eukaryota; Metazoa; Arthropoda; Chelicerata; Arachnida; Acari; Parasitiformes; Ixodida; Ixodoidea; Ixodidae; Rhipicephalinae; Rhipicephalus; Rhipicephalus; Rhipicephalus pulchellus; #=GF SQ 24 Q9U2P3/362-484 NFFSRYKHFIALIMAAPNEEEELNYGG----------------FLESRIRLLVQSLERNQDIIIAHNDPNKHKPSPNAK-FDVNPENK-RVTVWFIGLEFAEH---AKTLDLTNEIQRFKTNVELQASNVK---GIGPNCQVQIDMF G5EBX5/369-481 NFFSRYKHFISLSMTAETEKDELAFGG----------------FFESRIRQLVLILEKNQGIKLAHINPKKFKAAK----------DP-KKSVWFIGLQFDEN---VKNLDLTKDIQQFKRNIDYQAKSVK---DIEANCAVETDF- Q09995/364-476 NFFSKYHHFIALKLKAESVKEELAFGG----------------FFESRIRQLVQILEKNQVIQVAQINPRKFKDVK----------DP-KKSIWFIGLEFVAN---VKNVDLTSDIQQFKMNIDRQSMSVK---EIAAGCQVETDF- A7T589/363-480 NFFHKYRHYIVLSASSNTEEEHLEWIG----------------LVESKVRLLISYLENNEYIKLAHVNPKSYGPLDSEG-------EK-HVTRWFIGLMFEKL--ENVNINLTYEIQMFKNKVHAQAVKIM---MFKEGMVTEAKHV A7RJ31/365-478 NFFHKYKHYIVLSASSNTEEEHLEWIG----------------LVESKVRLLISYLENNEYIKLAHVNPKSYGPLDSEG-------EK-HVTRWFIGLMCEKL--ENVNINLTYEIQMFENKVHTQAVKIM---MLKKEWLQR---- E9GI20/371-488 NFFVKYKHFIVLIASSSSVEDQLEWVG----------------LVESKIRHLILALERNDHITLAHINPEQYDPVQPEP-------DT-ISTMWFIGLVFKKT--ESLNIDLTQDIQAFTGQVHRQASTAK---TVKDGRRIDAKHV H2ZD16/353-473 NFFNEYKHFIVLMASAESEENFNLWIG----------------LVESKIRILVGYLERNDYILIAHINQIGYPETIKDN--DV---TT-YVNRWFLGLRFVKDL-ISTNINLTHDIQAFTDTLHRQAHSSK---VFKDGMKVEATYS B7Q2V7/373-490 NFFGKYKHFIVLMATTMTKEHHLEWYG----------------LVESKIRILISNLERHPYIEIAHVNPESFPPCEPDG-------DK-LQSMWFIGLQFSKT--EHVNVDLTYDIRSFVDTVKRQATAIN---ILKQDMEVDIKYV H3EWD4/364-493 NFFSRYKHFLVVVCSADSEEHHLVWEG----------------MVKSKLRHLIGSLERNPRITLGHINPKTYKPNMNPCPFQIGYENP-VAEMWFVGLEFNKSMMGTKNVVLTEEITGFHDTVNRATRYSKGRETFTDDMKMLLNYV H2XJK0/355-476 NFFNEYKHFIVLMASAESQENFNLWTG----------------LVESKIRILVGYLERNDYILIAHINQTGYPQEVKEK--DV---TTAYVNRWFLGLRFVKDL-ISTNINLTHDIQAFTDTLHRQAHNSK---VFKEGMKVEATYS L7M703/386-503 NFFGKYKHFIVLMASTQSKEHHLEWYG----------------LVESKIRILISNLERHPYIAIAHVNPESFPPSEPEG-------DK-LQSMWFIGLQFNKT--EHVNIDLTYDTRSFVDTVKRQATAIN---IFKQDMEVDIKYV A0A023FN48/392-509 NFFGKYKHFIVLVASTLSKEHHLEWYG----------------LVESKIRILISNLERHPYIALAHVNPESFLPCEPDG-------DK-LQSMWFIGLQFNKT--EHVNVDLTYDTRSFVDTVKRQATAIN---ILKQDMEVDIKYV A0A131XEQ0/382-499 NFFGKYKHFIVLMASTQSKEHHLEWYG----------------LVESKIRILISNLERHPYIAIAHVNPESFPPSEPEG-------EK-LQSMWFIGLQFNKT--EHVNIDLTYDTRSFVDTVKRQATAIN---IFKQDMEVDIKYV A8X8P1/362-500 KFFSRYKHYIGMFFFLNCDHNLSAYLSSDHGYIHRRRGIELWRFLESRIRLLVQSLERNQDILIAHNDTNKHRPSPNAK-FDVRPENT-RITIWFIGLEFAEH---ATNLDLTSEIQRFRTNVELQASGVK---GIGPNSQVEIDMF A0A2H2I065/343-465 NFFSRYRHFIALIMAAPNEEAELNYGG----------------FLESRIRLLVQSLERNQDILIAHNDPNKHKPSPQAK-FDVRPENK-RVTVWFIGLEFAEH---AKNLDLTMEIQRFKVNVENQASAVK---SIGPECQVQIDMF A0A0P6GF45/375-492 NFFVKYKHFIVLIASSSSVEDQLEWVG----------------LVESKIRHLILALERNDHITLAHINPEQYDPVQPEP-------DT-ISTMWFIGLVFKKT--ESLNIDLTQDIQAFTAQVHRQAATAK---TVKDGRRIDAKHV A0A1E1X5R5/387-504 NFFGKYKHFIVLMASTLSKEHHLEWYG----------------LVESKIRILISNLERHPYIALAHVNPESFPPCEPDG-------DK-LQSMWFIGLQFNKT--EHVNVDLTYDTRSFVDTVKRQATAIN---ILKQDMEVDIKYV A0A2A6CS40/338-467 NFFSRYKHFLVVVCSADSEEHHLVWEG----------------MVKSKLRHLIGSLERNPRITLGHINPKTYKPNMNPCPFQIGYENP-VAEMWFVGLEFNKSMMGTKNVVLTEEITGFHDTVNRATRYSKGRETFTDDMKMLLNYV A0A1W5BAU6/355-476 NFFNEYKHFIVLMASAESQENFNLWTG----------------LVESKIRILVGYLERNDYILIAHINQTGYPQEVKEK--DV---TTAYVNRWFLGLRFVKDL-ISTNINLTHDIQAFTDTLHRQAHNSK---VFKEGMKVEATYS A0A0P6HH38/375-492 NFFVKYKHFIVLIASSSSVEDQLEWVG----------------LVESKIRHLILALERNDHITLAHINPEQYDPVQPEP-------DT-ISTMWFIGLVFKKT--ESLNIDLTQDIQAFTAQVHRQAATAK---TVKDGRRIDAKHV A0A0P5I4X1/375-492 NFFVKYKHFIVLIASSSSVEDQLEWVG----------------LVESKIRHLILALERNDHITLAHINPEQYDPVQPEP-------DT-ISTMWFIGLVFKKT--ESLNIDLTQDIQAFTAQVHRQAATAK---TVKDGRRIDAKHV A0A0P5FWR2/375-492 NFFVKYKHFIVLIASSSSVEDQLEWVG----------------LVESKIRHLILALERNDHITLAHINPEQYDPVQPEP-------DT-ISTMWFIGLVFKKT--ESLNIDLTQDIQAFTAQVHRQAATAK---TVKDGRRIDAKHV A0A0N8AVD3/375-492 NFFVKYKHFIVLIASSSSVEDQLEWVG----------------LVESKIRHLILALERNDHITLAHINPEQYDPVQPEP-------DT-ISTMWFIGLVFKKT--ESLNIDLTQDIQAFTAQVHRQAATAK---TVKDGRRIDAKHV L7MIN9/437-554 NFFGKYKHFIVLMASTQSKEHHLEWYG----------------LVESKIRILISNLERHPYIAIAHVNPESFPPSEPEG-------DK-LQSMWFIGLQFNKT--EHVNIDLTYDTRSFVDTVKRQATAIN---IFKQDMEVDIKYV #=GC scorecons 899469798867455536474464628000000000000000066797794973399774493678577446363334200010005403354997993836400233866993776393447457733460003554544654444 #=GC scorecons_70 ***_********_______*__*_*_*________________*******_**__****__*_***_**__*_*___________________*****_*_*______*__**_**__*___*__**____________________ #=GC scorecons_80 ***__*****_*_______*______*__________________*****_**__***___*__**_*_________________________*****_*________*__**_**__*___*__**____________________ #=GC scorecons_90 ***__*_**_________________*___________________*__*_*___**____*___*___________________________**_**_*________*__**_____*____________________________ //