# STOCKHOLM 1.0
#=GF ID 3.30.70.330/FF/000797
#=GF DE Nonsense-mediated mRNA decay protein Upf3, putative
#=GF AC 3.30.70.330/FF/000797
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 48.994
#=GS Q5BG25/426-505      AC Q5BG25
#=GS Q5BG25/426-505      OS Aspergillus nidulans FGSC A4
#=GS Q5BG25/426-505      DE Nonsense-mediated mRNA decay protein Upf3, putative (AFU_orthologue AFUA_6G11460)
#=GS Q5BG25/426-505      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Aspergillaceae; Aspergillus; Aspergillus nidulans; 
#=GS A0A1U8QU32/426-505  AC A0A1U8QU32
#=GS A0A1U8QU32/426-505  OS Aspergillus nidulans FGSC A4
#=GS A0A1U8QU32/426-505  DE Uncharacterized protein
#=GS A0A1U8QU32/426-505  DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Aspergillaceae; Aspergillus; Aspergillus nidulans; 
#=GS A0A2W1I4Z4/473-551  AC A0A2W1I4Z4
#=GS A0A2W1I4Z4/473-551  OS Pyrenophora tritici-repentis
#=GS A0A2W1I4Z4/473-551  DE DUF3584 multi-domain protein
#=GS A0A2W1I4Z4/473-551  DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Dothideomycetes; Pleosporomycetidae; Pleosporales; Pleosporineae; Pleosporaceae; Pyrenophora; Pyrenophora tritici-repentis; 
#=GS Q0UNF3/338-416      AC Q0UNF3
#=GS Q0UNF3/338-416      OS Parastagonospora nodorum SN15
#=GS Q0UNF3/338-416      DE Uncharacterized protein
#=GS Q0UNF3/338-416      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Dothideomycetes; Pleosporomycetidae; Pleosporales; Pleosporineae; Phaeosphaeriaceae; Parastagonospora; Parastagonospora nodorum; 
#=GS Q4WM23/424-504      AC Q4WM23
#=GS Q4WM23/424-504      OS Aspergillus fumigatus Af293
#=GS Q4WM23/424-504      DE Nonsense-mediated mRNA decay protein Upf3, putative
#=GS Q4WM23/424-504      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Aspergillaceae; Aspergillus; Aspergillus fumigatus; 
#=GS A0A2I1CC47/427-506  AC A0A2I1CC47
#=GS A0A2I1CC47/427-506  OS Aspergillus novofumigatus IBT 16806
#=GS A0A2I1CC47/427-506  DE Uncharacterized protein
#=GS A0A2I1CC47/427-506  DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Aspergillaceae; Aspergillus; Aspergillus novofumigatus; 
#=GS A0A0U5G814/421-503  AC A0A0U5G814
#=GS A0A0U5G814/421-503  OS Aspergillus calidoustus
#=GS A0A0U5G814/421-503  DE Putative Nonsense-mediated mRNA decay protein Upf3
#=GS A0A0U5G814/421-503  DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Aspergillaceae; Aspergillus; Aspergillus calidoustus; 
#=GS A0A0S7DGW8/427-506  AC A0A0S7DGW8
#=GS A0A0S7DGW8/427-506  OS Aspergillus lentulus
#=GS A0A0S7DGW8/427-506  DE Regulator of nonsense transcripts 3A
#=GS A0A0S7DGW8/427-506  DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Aspergillaceae; Aspergillus; Aspergillus lentulus; 
#=GS A0A0K8LKT7/427-507  AC A0A0K8LKT7
#=GS A0A0K8LKT7/427-507  OS Aspergillus udagawae
#=GS A0A0K8LKT7/427-507  DE Regulator of nonsense transcripts UPF3
#=GS A0A0K8LKT7/427-507  DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Aspergillaceae; Aspergillus; Aspergillus udagawae; 
#=GS A0A3D8R9D8/428-507  AC A0A3D8R9D8
#=GS A0A3D8R9D8/428-507  OS Aspergillus mulundensis
#=GS A0A3D8R9D8/428-507  DE Uncharacterized protein
#=GS A0A3D8R9D8/428-507  DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Aspergillaceae; Aspergillus; Aspergillus mulundensis; 
#=GS A0A229WZP5/427-507  AC A0A229WZP5
#=GS A0A229WZP5/427-507  OS Aspergillus turcosus
#=GS A0A229WZP5/427-507  DE Uncharacterized protein
#=GS A0A229WZP5/427-507  DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Aspergillaceae; Aspergillus; Aspergillus turcosus; 
#=GS A0A0J5Q3G2/424-504  AC A0A0J5Q3G2
#=GS A0A0J5Q3G2/424-504  OS Aspergillus fumigatus Z5
#=GS A0A0J5Q3G2/424-504  DE Nonsense-mediated mRNA decay protein Upf3
#=GS A0A0J5Q3G2/424-504  DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Aspergillaceae; Aspergillus; Aspergillus fumigatus; 
#=GS A0A229XRE8/424-504  AC A0A229XRE8
#=GS A0A229XRE8/424-504  OS Aspergillus fumigatus
#=GS A0A229XRE8/424-504  DE Uncharacterized protein
#=GS A0A229XRE8/424-504  DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Aspergillaceae; Aspergillus; Aspergillus fumigatus; 
#=GS B0Y8I6/424-504      AC B0Y8I6
#=GS B0Y8I6/424-504      OS Aspergillus fumigatus A1163
#=GS B0Y8I6/424-504      DE Nonsense-mediated mRNA decay protein Upf3, putative
#=GS B0Y8I6/424-504      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Aspergillaceae; Aspergillus; Aspergillus fumigatus; 
#=GF SQ 14
Q5BG25/426-505              ATQAFLKHANPSQGVTEPLLEAAFLPFGKVVKVEIDKKKGFGYVDFAEPEGLQKAISASPVTVAQSQVVVLERKANPGAE---
A0A1U8QU32/426-505          ATQAFLKHANPSQGVTEPLLEAAFLPFGKVVKVEIDKKKGFGYVDFAEPEGLQKAISASPVTVAQSQVVVLERKANPGAE---
A0A2W1I4Z4/473-551          SKQAFLKHANPSQGITEPLIEEAMKAYGGIDKVEIDKRKGFAYVDFAEPEGLQKAMAASPIKIAQGAVQVLERKEKVAR----
Q0UNF3/338-416              SKQAFLKHANPSQGITEPLIEESLKIFGAIDKVEIDKRKGFAYVDFTEPEGLRKAMAASPIKIAQGAVQVLERKEKVAR----
Q4WM23/424-504              -TQAFLKHANPSQGVTEPLLETAFAPFGKILKVEIDKKKGFGYIDFAEPDGLQKAIAASPVTVAQSQVVVLERKANPGAEKT-
A0A2I1CC47/427-506          -TQAFLKHANPSQGVTEPLLETAFAPFGKILKVEIDKKKGFGYIDFAEPDGLQKAIAASPVTVAQSQVVVLERKVNPGAEK--
A0A0U5G814/421-503          ATQAFLKHANPSQGVTEPLLETAFAPFGKVLKVEIDKKKGFGYVDFAQPDGLQKAIAASPVTVAQSQVVVLERKANPSAEKGR
A0A0S7DGW8/427-506          -TQAFLKHANPSQGVTEPLLETAFAPFGKILKVEIDKKKGFGYIDFAEPDGLQKAIAASPVTVAQSQVVVLERKVNPGAEK--
A0A0K8LKT7/427-507          -TQAFLKHANPSQGVTEPLLETAFAPFGKILKVEIDKKKGFGYIDFAEPDGLQKAIAASPVTVAQSQVVVLERKVNPGVEKA-
A0A3D8R9D8/428-507          ATQAFLKHANPSQGVTEPLLETAFSPFGKVVKVEIDKKKGFGYVDFAEPESLQKAISASPVTVAQSQVVVLERKANPGAE---
A0A229WZP5/427-507          -TQAFLKHANPSQGVTEPLLETAFAAFGKVLKVEIDKKKGFGYVDFAEPDGLQKAIAASPVTVAQSQVVVLERKMNPGAEKA-
A0A0J5Q3G2/424-504          -TQAFLKHANPSQGVTEPLLETAFAPFGKILKVEIDKKKGFGYIDFAEPDGLQKAIAASPVTVAQSQVVVLERKANPGAEKT-
A0A229XRE8/424-504          -TQAFLKHANPSQGVTEPLLETAFAPFGKILKVEIDKKKGFGYIDFAEPDGLQKAIAASPVTVAQSQVVVLERKANPGAEKT-
B0Y8I6/424-504              -TQAFLKHANPSQGVTEPLLETAFAPFGKILKVEIDKKKGFGYIDFAEPDGLQKAIAASPVTVAQSQVVVLERKPNPGAEKT-
#=GC scorecons              15999999999999799996957645895749999997999697997897897996799975799659599999465554100
#=GC scorecons_70           __*******************_*___**_*_******************************_****_*_*****_*_______
#=GC scorecons_80           __*****************_*_*___**_*_**********_*******_*****__****_***__*_*****_________
#=GC scorecons_90           __************_****_*_____**___******_***_*_**_**_**_**__***___**__*_*****_________
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