# STOCKHOLM 1.0
#=GF ID 3.30.70.330/FF/000765
#=GF DE RNA-binding protein TIA-1, putative
#=GF AC 3.30.70.330/FF/000765
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 58.570
#=GS Q95QV8/221-312      AC Q95QV8
#=GS Q95QV8/221-312      OS Caenorhabditis elegans
#=GS Q95QV8/221-312      DE TIA-1/TIAL RNA binding protein homolog
#=GS Q95QV8/221-312      DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis elegans; 
#=GS Q95QV8/221-312      DR GO; GO:0000003; GO:0002119; GO:0005634; GO:0005737; GO:0006979; GO:0008340; GO:0009411; GO:0010259; GO:0010494; GO:0040012; GO:0043186; 
#=GS Q9U2F5/235-362      AC Q9U2F5
#=GS Q9U2F5/235-362      OS Caenorhabditis elegans
#=GS Q9U2F5/235-362      DE TIA-1/TIAL RNA binding protein homolog
#=GS Q9U2F5/235-362      DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis elegans; 
#=GS Q9U2F5/235-362      DR GO; GO:0000003; GO:0002119; GO:0005634; GO:0005737; GO:0006972; GO:0008340; GO:0009408; GO:0010494; 
#=GS Q95QV7/189-280      AC Q95QV7
#=GS Q95QV7/189-280      OS Caenorhabditis elegans
#=GS Q95QV7/189-280      DE TIA-1/TIAL RNA binding protein homolog
#=GS Q95QV7/189-280      DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis elegans; 
#=GS K2G9K7/212-306      AC K2G9K7
#=GS K2G9K7/212-306      OS Entamoeba nuttalli P19
#=GS K2G9K7/212-306      DE RNA-binding protein TIA-1, putative
#=GS K2G9K7/212-306      DR ORG; Eukaryota; Entamoebidae; Entamoeba; Entamoeba nuttalli; 
#=GS B0EPA4/211-306      AC B0EPA4
#=GS B0EPA4/211-306      OS Entamoeba dispar SAW760
#=GS B0EPA4/211-306      DE Nucleolysin TIAR, putative
#=GS B0EPA4/211-306      DR ORG; Eukaryota; Entamoebidae; Entamoeba; Entamoeba dispar; 
#=GS M3UTM3/212-306      AC M3UTM3
#=GS M3UTM3/212-306      OS Entamoeba histolytica HM-1:IMSS-B
#=GS M3UTM3/212-306      DE RNA-binding protein TIA-1, putative
#=GS M3UTM3/212-306      DR ORG; Eukaryota; Entamoebidae; Entamoeba; Entamoeba histolytica; 
#=GS A0A2G5V4G9/259-350  AC A0A2G5V4G9
#=GS A0A2G5V4G9/259-350  OS Caenorhabditis nigoni
#=GS A0A2G5V4G9/259-350  DE Uncharacterized protein
#=GS A0A2G5V4G9/259-350  DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis nigoni; 
#=GS A8WU77/217-308      AC A8WU77
#=GS A8WU77/217-308      OS Caenorhabditis briggsae
#=GS A8WU77/217-308      DE Protein CBR-TIAR-1
#=GS A8WU77/217-308      DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis briggsae; 
#=GS A0A261CGC8/220-311  AC A0A261CGC8
#=GS A0A261CGC8/220-311  OS Caenorhabditis latens
#=GS A0A261CGC8/220-311  DE Uncharacterized protein
#=GS A0A261CGC8/220-311  DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis latens; 
#=GS A0A1I7TSJ7/218-308  AC A0A1I7TSJ7
#=GS A0A1I7TSJ7/218-308  OS Caenorhabditis tropicalis
#=GS A0A1I7TSJ7/218-308  DE Uncharacterized protein
#=GS A0A1I7TSJ7/218-308  DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis tropicalis; 
#=GS E3M4U4/219-310      AC E3M4U4
#=GS E3M4U4/219-310      OS Caenorhabditis remanei
#=GS E3M4U4/219-310      DE Uncharacterized protein
#=GS E3M4U4/219-310      DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis remanei; 
#=GS C4M9T1/212-306      AC C4M9T1
#=GS C4M9T1/212-306      OS Entamoeba histolytica
#=GS C4M9T1/212-306      DE RNA-binding protein TIA-1, putative
#=GS C4M9T1/212-306      DR ORG; Eukaryota; Entamoebidae; Entamoeba; Entamoeba histolytica; 
#=GS M2R8E4/212-306      AC M2R8E4
#=GS M2R8E4/212-306      OS Entamoeba histolytica KU27
#=GS M2R8E4/212-306      DE RNA-binding protein TIA-1, putative
#=GS M2R8E4/212-306      DR ORG; Eukaryota; Entamoebidae; Entamoeba; Entamoeba histolytica; 
#=GS N9UVC8/212-306      AC N9UVC8
#=GS N9UVC8/212-306      OS Entamoeba histolytica HM-1:IMSS-A
#=GS N9UVC8/212-306      DE RNA-binding protein TIA-1, putative
#=GS N9UVC8/212-306      DR ORG; Eukaryota; Entamoebidae; Entamoeba; Entamoeba histolytica; 
#=GS M7W7S8/212-306      AC M7W7S8
#=GS M7W7S8/212-306      OS Entamoeba histolytica HM-3:IMSS
#=GS M7W7S8/212-306      DE RNA-binding protein TIA-1, putative
#=GS M7W7S8/212-306      DR ORG; Eukaryota; Entamoebidae; Entamoeba; Entamoeba histolytica; 
#=GF SQ 15
Q95QV8/221-312              -PSHYNEKSYDEIYNQTSGDNTSVYVGNI-ASLTEDEIRQGFASFGRITEVRIFKMQGYAFVKFDNKDAAAKAIVQMNNQDVGGQLVRCSWGKT-----------------------------------
Q9U2F5/235-362              RYHNQSEKTYDEIFNQAAADNTSVYVGNI-ANLGEDEIRRAFDRFGPINEVRTFKIQGYAFVKFETKESAARAIVQMNNADIGGQIVRCSWGKSGDSGKPSERGSGGGGGSGNYGYGYGNSGGGGGSGG
Q95QV7/189-280              -PSHYNEKSYDEIYNQTSGDNTSVYVGNI-ASLTEDEIRQGFASFGRITEVRIFKMQGYAFVKFDNKDAAAKAIVQMNNQDVGGQLVRCSWGKT-----------------------------------
K2G9K7/212-306              -KTEQPKRSYDEINNETSSQNCTVYIGNIPKNVESDDLKQLLAEYGSIEEVRLNKDKGYAFIKFSKHESATSAILMCNGKIINGSTLRCSWGRESH---------------------------------
B0EPA4/211-306              SKTEQPKRSYDEINNETSIQNCTVYIGNIPKNVESDDLKQLLAEYGSIEEVRLNKDKGYAFIKFSKHESATSAILMCNGKIINGSTLRCSWGRESH---------------------------------
M3UTM3/212-306              -KTEQPKRSYDEINNETSSQNCTVYIGNIPKNVESDDLKQLLAEYGSIEEVRLNKDKGYAFIKFSKHESATSAILMCNGKIINGSTLRCSWGRESH---------------------------------
A0A2G5V4G9/259-350          -PSHYNEKSYDEVYNQTSGDNTSVYVGNI-ANLTEDEIRQAFASYGRISEVRIFKMQGYAFVKFENKNAAAKAITEMNNQDVGGQMVRCSWGKT-----------------------------------
A8WU77/217-308              -PSNYNEKSYDEVYNQTSGDNTSVYVGNI-ANLTEDEIRQAFASYGRISEVRIFKMQGYAFVKFENKNAAAKAITEMNNQDVGGQMVRCSWGKT-----------------------------------
A0A261CGC8/220-311          -PTHYNEKSYDEIYNQTSGDNTSVYVGNI-ANLSEDEIRQAFASYGRISEVRIFKMQGYAFVKFDNKDAAAKAIVQMNNQEVGGQLVRCSWGKT-----------------------------------
A0A1I7TSJ7/218-308          --VHYNEKSYDEIYNQTSGDNTSVYVGNI-ANLTEEEIRSAFASYGRISEVRIFKMQGYAFVKFDNKDAAAKAIVQMNNQEVGGQVVRCSWGKT-----------------------------------
E3M4U4/219-310              -PTHYNEKSFDEIYNQTSGDNTSVYVGNI-ANLSEDEIRQAFASYGRISEVRIFKMQGYAFVKFDNKDAAAKAIVQMNNQEVGGQLVRCSWGKT-----------------------------------
C4M9T1/212-306              -KTEQPKRSYDEINNETSSQNCTVYIGNIPKNVESDDLKQLLAEYGSIEEVRLNKDKGYAFIKFSKHESATSAILMCNGKIINGSTLRCSWGRESH---------------------------------
M2R8E4/212-306              -KTEQPKRSYDEINNETSSQNCTVYIGNIPKNVESDDLKQLLAEYGSIEEVRLNKDKGYAFIKFSKHESATSAILMCNGKIINGSTLRCSWGRESH---------------------------------
N9UVC8/212-306              -KTEQPKRSYDEINNETSSQNCTVYIGNIPKNVESDDLKQLLAEYGSIEEVRLNKDKGYAFIKFSKHESATSAILMCNGKIINGSTLRCSWGRESH---------------------------------
M7W7S8/212-306              -KTEQPKRSYDEINNETSSQNCTVYIGNIPKNVESDDLKQLLAEYGSIEEVRLNKDKGYAFIKFSKHESATSAILMCNGKIINGSTLRCSWGRESH---------------------------------
#=GC scorecons              035555677899859677559569979991576458767746747949499954946999979955666965995459554759546999997411000000000000000000000000000000000
#=GC scorecons_70           _______******_****__*__******__**__*****_**_**_*_***__*_********___*_**_**___*___*_*__*******____________________________________
#=GC scorecons_80           ________*****_*_**__*__**_***__*___*______*_**_*_***__*__****_**_____*__**___*_____*___*****_____________________________________
#=GC scorecons_90           _________****_*_____*__**_***______*_________*_*_***__*__****_**_____*__**___*_____*___*****_____________________________________
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