# STOCKHOLM 1.0 #=GF ID 3.30.70.330/FF/000640 #=GF DE UBP1-associated protein 2C #=GF AC 3.30.70.330/FF/000640 #=GF TP FunFam #=GF DR CATH: v4.3 #=GF DR DOPS: 61.158 #=GS Q9LKA4/161-271 AC Q9LKA4 #=GS Q9LKA4/161-271 OS Arabidopsis thaliana #=GS Q9LKA4/161-271 DE UBP1-associated protein 2C #=GS Q9LKA4/161-271 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana; #=GS Q9LKA4/161-271 DR GO; GO:0003729; GO:0005634; GO:0005730; GO:0006952; GO:0008219; GO:0009693; GO:0010150; #=GS A0A178V7K4/161-271 AC A0A178V7K4 #=GS A0A178V7K4/161-271 OS Arabidopsis thaliana #=GS A0A178V7K4/161-271 DE Uncharacterized protein #=GS A0A178V7K4/161-271 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana; #=GS Q5ZDX8/170-282 AC Q5ZDX8 #=GS Q5ZDX8/170-282 OS Oryza sativa Japonica Group #=GS Q5ZDX8/170-282 DE Heterogeneous nuclear ribonucleoprotein A2/B1-like #=GS Q5ZDX8/170-282 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa; #=GS A5ADJ5/151-275 AC A5ADJ5 #=GS A5ADJ5/151-275 OS Vitis vinifera #=GS A5ADJ5/151-275 DE Uncharacterized protein #=GS A5ADJ5/151-275 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Vitales; Vitaceae; Viteae; Vitis; Vitis vinifera; #=GS I1HPD5/169-302 AC I1HPD5 #=GS I1HPD5/169-302 OS Brachypodium distachyon #=GS I1HPD5/169-302 DE Uncharacterized protein #=GS I1HPD5/169-302 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Pooideae; Brachypodieae; Brachypodium; Brachypodium distachyon; #=GS A0A3L6SUW7/171-289 AC A0A3L6SUW7 #=GS A0A3L6SUW7/171-289 OS Panicum miliaceum #=GS A0A3L6SUW7/171-289 DE UBP1-associated protein 2C #=GS A0A3L6SUW7/171-289 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Paniceae; Panicinae; Panicum; Panicum miliaceum; #=GS D7L3Y0/162-270 AC D7L3Y0 #=GS D7L3Y0/162-270 OS Arabidopsis lyrata subsp. lyrata #=GS D7L3Y0/162-270 DE Uncharacterized protein #=GS D7L3Y0/162-270 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis lyrata; Arabidopsis lyrata subsp. lyrata; #=GS C0P558/169-288 AC C0P558 #=GS C0P558/169-288 OS Zea mays #=GS C0P558/169-288 DE UBP1-associated protein 2C #=GS C0P558/169-288 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Tripsacinae; Zea; Zea mays; #=GS A0A0D9V2W2/171-284 AC A0A0D9V2W2 #=GS A0A0D9V2W2/171-284 OS Leersia perrieri #=GS A0A0D9V2W2/171-284 DE Uncharacterized protein #=GS A0A0D9V2W2/171-284 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Leersia; Leersia perrieri; #=GS A0A2S3HU06/219-338 AC A0A2S3HU06 #=GS A0A2S3HU06/219-338 OS Panicum hallii #=GS A0A2S3HU06/219-338 DE Uncharacterized protein #=GS A0A2S3HU06/219-338 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Paniceae; Panicinae; Panicum; Panicum sect. Panicum; Panicum hallii; #=GS A0A0E0E0C0/169-281 AC A0A0E0E0C0 #=GS A0A0E0E0C0/169-281 OS Oryza meridionalis #=GS A0A0E0E0C0/169-281 DE Uncharacterized protein #=GS A0A0E0E0C0/169-281 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza meridionalis; #=GS A0A0E0MZ87/170-282 AC A0A0E0MZ87 #=GS A0A0E0MZ87/170-282 OS Oryza rufipogon #=GS A0A0E0MZ87/170-282 DE Uncharacterized protein #=GS A0A0E0MZ87/170-282 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza rufipogon; #=GS A0A0E0JL57/169-282 AC A0A0E0JL57 #=GS A0A0E0JL57/169-282 OS Oryza punctata #=GS A0A0E0JL57/169-282 DE Uncharacterized protein #=GS A0A0E0JL57/169-282 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza punctata; #=GS A0A0D9YBP0/216-329 AC A0A0D9YBP0 #=GS A0A0D9YBP0/216-329 OS Oryza glumipatula #=GS A0A0D9YBP0/216-329 DE Uncharacterized protein #=GS A0A0D9YBP0/216-329 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza glumipatula; #=GS A0A0E0FPJ0/170-282 AC A0A0E0FPJ0 #=GS A0A0E0FPJ0/170-282 OS Oryza sativa f. spontanea #=GS A0A0E0FPJ0/170-282 DE Uncharacterized protein #=GS A0A0E0FPJ0/170-282 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa; Oryza sativa f. spontanea; #=GS A0A3L6QY99/170-289 AC A0A3L6QY99 #=GS A0A3L6QY99/170-289 OS Panicum miliaceum #=GS A0A3L6QY99/170-289 DE UBP1-associated protein 2C #=GS A0A3L6QY99/170-289 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Paniceae; Panicinae; Panicum; Panicum miliaceum; #=GS A0A3L6DMC9/169-288 AC A0A3L6DMC9 #=GS A0A3L6DMC9/169-288 OS Zea mays #=GS A0A3L6DMC9/169-288 DE UBP1-associated protein 2C #=GS A0A3L6DMC9/169-288 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Tripsacinae; Zea; Zea mays; #=GS A0A1D6FZ20/144-264 AC A0A1D6FZ20 #=GS A0A1D6FZ20/144-264 OS Zea mays #=GS A0A1D6FZ20/144-264 DE UBP1-associated protein 2C #=GS A0A1D6FZ20/144-264 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Tripsacinae; Zea; Zea mays; #=GS A0A096QLU9/172-288 AC A0A096QLU9 #=GS A0A096QLU9/172-288 OS Zea mays #=GS A0A096QLU9/172-288 DE Heterogeneous nuclear ribonucleoprotein A3-like protein 2 #=GS A0A096QLU9/172-288 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Tripsacinae; Zea; Zea mays; #=GF SQ 19 Q9LKA4/161-271 --------IADISMRKIYVANVPFDMPADRLLNHFMAYGDVEEGPLGFDKVTGKSRGFALFVYKTAEGAQAALADPVKVIDGKHLNCKLAVDGKK-GGKPGMPQAQDGGSGH---GHVHGEGM--------------------------- A0A178V7K4/161-271 --------IADISMRKIYVANVPFDMPADRLLNHFMAYGDVEEGPLGFDKVTGKSRGFALFVYKTAEGAQAALADPVKVIDGKHLNCKLAVDGKK-GGKPGMPQAQDGGSGH---GHVHGEGM--------------------------- Q5ZDX8/170-282 -------PAADVSLRKIFVGNVPADMPSERLLAHFAAYGEIEEGPLGFDKQTGKFRGFALFVYKTPEGAQASLVDSVKVIDGHQLVCKLAIEGKK-GKQS-QQQQQQSGPGG---AQ-PPQMLQGG------------------------ A5ADJ5/151-275 SGPASNASAVDVSMRKIYVANVPVDMPADRLLAHFSSYGEIEEGPLGFDKQTGKSRGFALFVYKTAEAAQAALVDPTKMIDGRQLVCKLAIEGKK-GKTGGPAQAPTGVPGE---AG-HGDGLGVPPQ--------------GS------ I1HPD5/169-302 -------PAADVSLRKIFVGNVPADMSSERLLAHFASYGEIEEGPLGFDKQTGKFRGFALFVYKTPDGAQASLVDSIKTIEGHQLVCKLAIEGKK-GKQ----QPQQSGPAG---QQ-QPQMLQGGPQEMPGSGLGLGGPQLGGYGGGPG A0A3L6SUW7/171-289 ---------ADVSLRKIFVGNVPADMSSERLLAHFASYGEIEEGPLGFDKQTGKFRGFALFVYKTPEGAQASLVDSVKVIEGHQLVCKLAIEGKK-GKQG---QSQQSGAAN--QQQ-QQQMMQGGPQEMQG-GLG-------------- D7L3Y0/162-270 ---------ADISMRKIYVANVPFDMPADRLLNHFMAYGDVEEGPLGFDKVTGKSRGFALFVYKTAEGAQTALADPVKVIDGKHLNCKLAVDGKKGGGKPGMPQAQDGGSGH---GHVHGD----------------------------- C0P558/169-288 -------PVADVSLRKIFVGNVPADMSSERLLAHFASYGEIEEGPLGFDKQTGKFRGFALFVYKTPEGAQASLVDSVKVIDSHQLVCKLAIDGKK-GKQG---QSQQSGPGNQQQQQ-QQQMLPGGPQEIQG------------------ A0A0D9V2W2/171-284 -------PVADVSLRKIFVGNVPADMPSERLLAHFASYGEIEEGPLGFDKQTGKFRGFALFVYKTPEGAQASLVDSVKVIDGHQLVCKLAIEGKK-GKQS--QQQQQSGPGG---AQ-PPQMLQGGPP---------------------- A0A2S3HU06/219-338 --------VADVSLRKIFVGNVPADMSSERLLAHFASYGEIEEGPLGFDKQTGKFRGFALFVYKTPEGAQASLVDSVKVIEGHQLVCKLAIEGKK-GKQG---QSQQSGAAN--QQQ-QQQMMQGGPQEMQG-GLG-------------- A0A0E0E0C0/169-281 -------PAADVSLRKIFVGNVPADMPSERLLAHFAAYGEIEEGPLGFDKQTGKFRGFALFVYKTPEGAQASLVDSVKVIDGHQLVCKLAIEGKK-GKQS-QQQQQQSGPGG---AQ-PPQMLQGG------------------------ A0A0E0MZ87/170-282 -------PAADVSLRKIFVGNVPADMPSERLLAHFAAYGEIEEGPLGFDKQTGKFRGFALFVYKTPEGAQASLVDSVKVIDGHQLVCKLAIEGKK-GKQS-QQQQQQSGPGG---AQ-PPQMLQGG------------------------ A0A0E0JL57/169-282 -------PVADVSLRKIFVGNVPADMPSERLLAHFAAYGEIEEGPLGFDKQTGKFRGFALFVYKTPEGAQASLVDSVKVIDGHQLVCKLAIEGKK-GKQS-QQQQQQSGPGG---AQ-PPQMLQGGP----------------------- A0A0D9YBP0/216-329 -------PAADVSLRKIFVGNVPADMPSERLLAHFAAYGEIEEGPLGFDKQTGKFRGFALFVYKTPEGAQASLVDSVKVIDGHQLVCKLAIEGKK-GKQSQQQQQQQSGPGG---AQ-PPQMLQGG------------------------ A0A0E0FPJ0/170-282 -------PAADVSLRKIFVGNVPADMPSERLLAHFAAYGEIEEGPLGFDKQTGKFRGFALFVYKTPEGAQASLVDSVKVIDGHQLVCKLAIEGKK-GKQS-QQQQQQSGPGG---AQ-PPQMLQGG------------------------ A0A3L6QY99/170-289 --------VADVSLRKIFVGNVPADMSSERLLAHFASYGEIEEGPLGFDKQTGKFRGFALFVYKTPEGAQASLVDSVKVIEGHQLVCKLAIEGKK-GKQG---QSQQSGAANQQQQQ-QQQMMQGGPQEMQG-G---------------- A0A3L6DMC9/169-288 -------PVADVSLRKIFVGNVPADMSSERLLAHFASYGEIEEGPLGFDKQTGKFRGFALFVYKTPEGAQASLVDSVKVIDSHQLVCKLAIDGKK-GKQG---QSQQSGPGNQQQQQ-QQQMLPGGPQEIQG------------------ A0A1D6FZ20/144-264 ------APVADVSLRKIFVGNVPADMSSERLLAHFASYGEIEEGPLGFDKQTGKFRGFALFVYKTPEGAQASLVDSVKVIDSHQLVCKLAIDGKK-GKQG---QSQQSGPGNQQQQQ-QQQMLPGGPQEIQG------------------ A0A096QLU9/172-288 ----------DVSLRKIFVGNVPADMASERLLAHFASYGEIEEGPLGFDKQTGKFRGFALFVYKTPEGAQASLVDTVKVIDGHQLVCKLALDGKK-EKQG---QSQQPGPGN---HQ-QQQILPGGPQDIQG-GLG-------------- #=GC scorecons 000000023797979997969995996679996995699779999999996999599999999996889986969679797767969999779990866401194856757400046054645344221111000000000000000000 #=GC scorecons_70 _________**************_**_********__*************_***_********************_*********_*********_**_____*_*__*_*_____*___*_____________________________ #=GC scorecons_80 __________***_*****_***_**__****_**__*************_***_**********_*****_*_*_******_**_*****_***_*______*_*__*_________________________________________ #=GC scorecons_90 __________*_*_***_*_***_**___***_**__**__*********_***_**********_*****_*_*__*_*____*_****__***_*______*______________________________________________ //