# STOCKHOLM 1.0 #=GF ID 3.30.70.330/FF/000627 #=GF DE RNA-binding (RRM/RBD/RNP motifs) family protein #=GF AC 3.30.70.330/FF/000627 #=GF TP FunFam #=GF DR CATH: v4.3 #=GF DR DOPS: 57.393 #=GS Q2QY16/6-189 AC Q2QY16 #=GS Q2QY16/6-189 OS Oryza sativa Japonica Group #=GS Q2QY16/6-189 DE Os12g0136200 protein #=GS Q2QY16/6-189 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa; #=GS B9GBS7/9-189 AC B9GBS7 #=GS B9GBS7/9-189 OS Oryza sativa Japonica Group #=GS B9GBS7/9-189 DE Uncharacterized protein #=GS B9GBS7/9-189 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa; #=GS A0A0P0XYR2/48-212 AC A0A0P0XYR2 #=GS A0A0P0XYR2/48-212 OS Oryza sativa Japonica Group #=GS A0A0P0XYR2/48-212 DE Os11g0139500 protein #=GS A0A0P0XYR2/48-212 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa; #=GS B9G9B7/399-567 AC B9G9B7 #=GS B9G9B7/399-567 OS Oryza sativa Japonica Group #=GS B9G9B7/399-567 DE Uncharacterized protein #=GS B9G9B7/399-567 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa; #=GS A0A1D6IR03/18-172 AC A0A1D6IR03 #=GS A0A1D6IR03/18-172 OS Zea mays #=GS A0A1D6IR03/18-172 DE RNA-binding (RRM/RBD/RNP motifs) family protein #=GS A0A1D6IR03/18-172 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Tripsacinae; Zea; Zea mays; #=GS A0A0E0BF24/90-268 AC A0A0E0BF24 #=GS A0A0E0BF24/90-268 OS Oryza glumipatula #=GS A0A0E0BF24/90-268 DE Uncharacterized protein #=GS A0A0E0BF24/90-268 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza glumipatula; #=GS I1R3U5/10-193 AC I1R3U5 #=GS I1R3U5/10-193 OS Oryza glaberrima #=GS I1R3U5/10-193 DE Uncharacterized protein #=GS I1R3U5/10-193 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza glaberrima; #=GS A0A0D3HHZ3/46-224 AC A0A0D3HHZ3 #=GS A0A0D3HHZ3/46-224 OS Oryza barthii #=GS A0A0D3HHZ3/46-224 DE Uncharacterized protein #=GS A0A0D3HHZ3/46-224 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza barthii; #=GS A0A0E0MJE6/20-185 AC A0A0E0MJE6 #=GS A0A0E0MJE6/20-185 OS Oryza punctata #=GS A0A0E0MJE6/20-185 DE Uncharacterized protein #=GS A0A0E0MJE6/20-185 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza punctata; #=GS A0A0E0R3Y0/100-268 AC A0A0E0R3Y0 #=GS A0A0E0R3Y0/100-268 OS Oryza rufipogon #=GS A0A0E0R3Y0/100-268 DE Uncharacterized protein #=GS A0A0E0R3Y0/100-268 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza rufipogon; #=GS A0A0D3HHZ2/117-289 AC A0A0D3HHZ2 #=GS A0A0D3HHZ2/117-289 OS Oryza barthii #=GS A0A0D3HHZ2/117-289 DE Uncharacterized protein #=GS A0A0D3HHZ2/117-289 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza barthii; #=GS I1QXH5/22-189 AC I1QXH5 #=GS I1QXH5/22-189 OS Oryza glaberrima #=GS I1QXH5/22-189 DE Uncharacterized protein #=GS I1QXH5/22-189 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza glaberrima; #=GS A0A1D6IR02/18-172 AC A0A1D6IR02 #=GS A0A1D6IR02/18-172 OS Zea mays #=GS A0A1D6IR02/18-172 DE RNA-binding (RRM/RBD/RNP motifs) family protein #=GS A0A1D6IR02/18-172 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Tripsacinae; Zea; Zea mays; #=GS A0A3L6G4L9/18-172 AC A0A3L6G4L9 #=GS A0A3L6G4L9/18-172 OS Zea mays #=GS A0A3L6G4L9/18-172 DE Uncharacterized protein #=GS A0A3L6G4L9/18-172 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Tripsacinae; Zea; Zea mays; #=GS K7UB59/17-172 AC K7UB59 #=GS K7UB59/17-172 OS Zea mays #=GS K7UB59/17-172 DE RNA-binding (RRM/RBD/RNP motifs) family protein #=GS K7UB59/17-172 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Tripsacinae; Zea; Zea mays; #=GS A0A1D6EIH7/21-181 AC A0A1D6EIH7 #=GS A0A1D6EIH7/21-181 OS Zea mays #=GS A0A1D6EIH7/21-181 DE RNA-binding (RRM/RBD/RNP motifs) family protein #=GS A0A1D6EIH7/21-181 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Tripsacinae; Zea; Zea mays; #=GS A0A1D6EIH9/22-181 AC A0A1D6EIH9 #=GS A0A1D6EIH9/22-181 OS Zea mays #=GS A0A1D6EIH9/22-181 DE RNA-binding (RRM/RBD/RNP motifs) family protein #=GS A0A1D6EIH9/22-181 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Tripsacinae; Zea; Zea mays; #=GS A0A1D6QHC5/22-180 AC A0A1D6QHC5 #=GS A0A1D6QHC5/22-180 OS Zea mays #=GS A0A1D6QHC5/22-180 DE RNA-binding (RRM/RBD/RNP motifs) family protein #=GS A0A1D6QHC5/22-180 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Tripsacinae; Zea; Zea mays; #=GS A0A1D6QHD1/22-180 AC A0A1D6QHD1 #=GS A0A1D6QHD1/22-180 OS Zea mays #=GS A0A1D6QHD1/22-180 DE RNA-binding (RRM/RBD/RNP motifs) family protein #=GS A0A1D6QHD1/22-180 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Tripsacinae; Zea; Zea mays; #=GS C4IYY4/22-180 AC C4IYY4 #=GS C4IYY4/22-180 OS Zea mays #=GS C4IYY4/22-180 DE RNA-binding (RRM/RBD/RNP motifs) family protein #=GS C4IYY4/22-180 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Tripsacinae; Zea; Zea mays; #=GF SQ 20 Q2QY16/6-189 DNAASANSVEPEKSEECLEFDDDEEEEVEEEEIEYEEIEEEI-----EEEEV-------EEDED-VVEEVEEV----DEEEDEEEEEESDETEGVSKTKGVHQKDVTEKGKHAELLALPPHGSEVYVGGISSDVSSEDLKRLCEPVGEVVEVRMMRGKDDSRGYAFVNFRTKGLALKAVKELNNAKLKGKRIRVSSSQAKN B9GBS7/9-189 ---ASANSVEPEKSEECLEFDDDEEEEVEEEEIEYEEIEEEI-----EEEEV-------EEDED-VVEEVEEV----DEEEDEEEEEESDETEGVSKTKGVHQKDVTEKGKHAELLALPPHGSEVYVGGISSDVSSEDLKRLCEPVGEVVEVRMMRGKDDSRGYAFVNFRTKGLALKAVKELNNAKLKGKRIRVSSSQAKN A0A0P0XYR2/48-212 -------------------F-DDEEEEVEEEEIEYEEIEEEI----EEEEEV-------EEDED-VVEEVEEV----DEEEDEEEDEESDETEGVSKTKGVHQKDVTEKGKHAELLALPPHGSEVYVGGISSDVSSEDLKRLCEPVGEVVEVRMMRGKDDSRGYAFVNFRTKGLALKVVKELNNAKLKGKRIRVSSSQAKN B9G9B7/399-567 ---------------ECLEF-DDEEEEVEEEEIEYEEIEEEI----EEEEEV-------EEDED-VVEEVEEV----DEEEDEEEDEESDETEGVSKTKGVHQKDVTEKGKHAELLALPPHGSEVYVGGISSDVSSEDLKRLCEPVGEVVEVRMMRGKDDSRGYAFVNFRTKGLALKVVKELNNAKLKGKRIRVSSSQAKN A0A1D6IR03/18-172 ------------KQQDRLEF-DDPDEVDEEEEVEYEEVEEEV-----EYEET-------EDEYG-QTEAVRQV----DAKHD-------------SKMVDADT-DEGGKGSHDELLALPPHGSEVYVGGIASDVSSDDLKKLCESVGEVVEVR-MPGK-SGRLYAFVNFRTKELASKAIQKLNNKDLKGKKIRVSSSQAKN A0A0E0BF24/90-268 -----ANSVEPDKSEECLEF-DDEEEEVEEEEIEYEEIEEEI----EEEEEV-------EEDED-VVEEVEEV----DEEEDEEEEEESDETEGVSKTKGVHQKDVTEKGKHAELLALPPHGSEVYVGGISSDVSSEDLKRLCEPVGEVVEVRMMRGKDDSRGYAFVNFRTKGLALKVVKELNNAKLKGKRIRVSSSQAKN I1R3U5/10-193 DNAASANSVEPEKSEECLEFDDDDEEEVEEEEIEYEEIEEEI-----EEEEV-------EEDED-VVEEVEEV----DEEEDEEEEEESDETEGVSKTKGVHQKDVTEKGKHAELLALPPHGSEVYVGGISSDVSSEDLKRLCEPVGEVVEVRMMRGKDDSRGYAFVNFRTKGLALKAVKELNNAKLKGKRIRVSSSQAKN A0A0D3HHZ3/46-224 ---------EPDKSEECLEF-DDEEEEVEEEEIEYEEIEEEI----EEEEEV-------EEDED-VVEEVEEVDEEEDEEEDEEEEEESDETEGVSKTKGVHQKDVTEKGKHAELLALPPHGSEVYVGGISSDVSSEDLKRLCEPVGEVVEVRMMRGKDDSRGYAFVNFRTKGLALKVVKELNNAKLKGKRIRVSSSQAKN A0A0E0MJE6/20-185 --------------EECLEF-DDDEEEVEEEEIEYEEIEEEIEEEEEEEEEV-------EEDED-VVEEVEEV----D--------EESDETEGVSKTKGVHQKDVTEKGKHAELLALPPHGSEVYVGGISSDVSSEDLKKLCEPVGEVVEVRMMRGKDDSRGYAFVNFRTKGLALKAVKELNNAKLKGKRIRVSSSQAKN A0A0E0R3Y0/100-268 ---------------ECLEF-DDEEEEVEEEEIEYEEIEEEI----EEEEEV-------EEDED-VVEEVEEV----DEEEDEEEDEESDETEGVSKTKGVHQKDVTEKGKHAELLALPPHGSEVYVGGISSDVSSEDLKRLCEPVGEVVEVRMMRGKDDSRGYAFVNFRTKGLALKVVKELNNAKLKGKRIRVSSSQAKN A0A0D3HHZ2/117-289 ---------------ECLEF-DDEEEEVEEEEIEYEEIEEEI----EEEEEV-------EEDED-VVEEVEEVDEEEDEEEDEEEEEESDETEGVSKTKGVHQKDVTEKGKHAELLALPPHGSEVYVGGISSDVSSEDLKRLCEPVGEVVEVRMMRGKDDSRGYAFVNFRTKGLALKVVKELNNAKLKGKRIRVSSSQAKN I1QXH5/22-189 ----------------CLEF-DDEEEEVEEEEIEYEEIEEEI----EEEEEV-------EEDED-VVEEVEEV----DEEEDEEEEEESDETEGVSKTKGVHQKDVTGKGKHAELLALPPHGSEVYVGGISSDVSSEDLKRLCEPVGEVVEVRMMRGKDDSRGYAFVNFRTKGLALKVVKELNNAKLKGKRIRVSSSQAKN A0A1D6IR02/18-172 ------------KQQDRLEF-DDPDEVDEEEEVEYEEVEEEV-----EYEET-------EDEYG-QTEAVRQV----DAKHD-------------SKMVDADT-DEGGKGSHDELLALPPHGSEVYVGGIASDVSSDDLKKLCESVGEVVEVR-MPGK-SGRLYAFVNFRTKELASKAIQKLNNKDLKGKKIRVSSSQAKN A0A3L6G4L9/18-172 ------------KQQDRLEF-DDPDEVDEEEEVEYEEVEEEV-----EYEET-------EDEYG-QTEAVRQV----DAKHD-------------SKMVDADT-DEGGKGSHDELLALPPHGSEVYVGGIASDVSSDDLKKLCESVGEVVEVR-MPGK-SGRLYAFVNFRTKELASKAIQKLNNKDLKGKKIRVSSSQAKN K7UB59/17-172 -----------VKQQDRLEF-DDPDEVDEEEEVEYEEVEEEV-----EYEET-------EDEYG-QTEAVRQV----DAKHD-------------SKMVDADT-DEGGKGSHDELLALPPHGSEVYVGGIASDVSSDDLKKLCESVGEVVEVR-MPGK-SGRLYAFVNFRTKELASKAIQKLNNKDLKGKKIRVSSSQAKN A0A1D6EIH7/21-181 ----------------QLEF-DDPDEVDDEEEVEYEEIEEEV-----EYEEVEEEEEEDEDEEDEEMEGVHEI----DANDE-------------SKMVDADGKVENEKEKHAELLALPPHGAEVYVGGISSDVSSEDLKQLFESVGEVVEVR-MRGKGDNRTYAFINFRTKAMALKAIQNLSNKDLKGKKIKVSPSQAKN A0A1D6EIH9/22-181 -----------------LEF-DDPDEVDDEEEVEYEEIEEEV-----EYEEVEEEEEEDEDEEDEEMEGVHEI----DANDE-------------SKMVDADGKVENEKEKHAELLALPPHGAEVYVGGISSDVSSEDLKQLFESVGEVVEVR-MRGKGDNRTYAFINFRTKAMALKAIQNLSNKDLKGKKIKVSPSQAKN A0A1D6QHC5/22-180 -----------------MEF-DHPDEVDEEEEVEYEEIEEEV-----EYEEVEVEEEEEEEEED-EIEGVREV----DANHD-------------SKIVDDDPKDGNEKEKHAELLALPPHGAEVYVGGLSSDVSSEDLKQLFESVGEVAEVR-MRGKGDNKTYAFINFRTKEMALKAIQKLSNKDLKGKKIKVSSSQAKN A0A1D6QHD1/22-180 -----------------MEF-DHPDEVDEEEEVEYEEIEEEV-----EYEEVEVEEEEEEEEED-EIEGVREV----DANHD-------------SKIVDDDPKDGNEKEKHAELLALPPHGAEVYVGGLSSDVSSEDLKQLFESVGEVAEVR-MRGKGDNKTYAFINFRTKEMALKAIQKLSNKDLKGKKIKVSSSQAKN C4IYY4/22-180 -----------------MEF-DHPDEVDEEEEVEYEEIEEEV-----EYEEVEVEEEEEEEEED-EIEGVREV----DANHD-------------SKIVDDDPKDGNEKEKHAELLALPPHGAEVYVGGLSSDVSSEDLKQLFESVGEVAEVR-MRGKGDNKTYAFINFRTKEMALKAIQKLSNKDLKGKKIKVSSSQAKN #=GC scorecons 000000000000111227890974795489997999979997000009499600000009775704595957800009444711112222222229954645457456966969999999996999999779999979996969699997999296993657499979999957969676596955999979799799999 #=GC scorecons_70 _________________***_**_**__**************_____*_***_______***_*___*_*_**____*___*_____________**_______*__*********************************_***_********_****_*_*_*********_*******_***__*************** #=GC scorecons_80 __________________**_**__*__****_********______*_**________**______*_*_**____*___*_____________**_______*___*__*_*********_*******_*********_*_*_********_*_**___*_*********__*_*____*_*__****_********** #=GC scorecons_90 __________________**_*___*__****_****_***______*_**________*_______*_*__*____*_________________**___________*__*_*********_******__*****_***_*_*_****_***_*_**_____***_*****__*_*____*_*__****_*_**_***** //