# STOCKHOLM 1.0
#=GF ID 3.30.70.330/FF/000568
#=GF DE U2 snRNP auxiliary factor large subunit
#=GF AC 3.30.70.330/FF/000568
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 84.569
#=GS Q8IKE9/571-680      AC Q8IKE9
#=GS Q8IKE9/571-680      OS Plasmodium falciparum 3D7
#=GS Q8IKE9/571-680      DE Splicing factor U2AF large subunit, putative
#=GS Q8IKE9/571-680      DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS Q8IKE9/571-680      DR GO; GO:0000398; GO:0003723; 
#=GS A8J055/107-219      AC A8J055
#=GS A8J055/107-219      OS Chlamydomonas reinhardtii
#=GS A8J055/107-219      DE U2 snRNP auxiliary factor large subunit
#=GS A8J055/107-219      DR ORG; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Chlamydomonadaceae; Chlamydomonas; Chlamydomonas reinhardtii; 
#=GS A9SNH7/279-371      AC A9SNH7
#=GS A9SNH7/279-371      OS Physcomitrella patens
#=GS A9SNH7/279-371      DE U2 snRNP auxiliary factor large subunit
#=GS A9SNH7/279-371      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Bryopsida; Funariidae; Funariales; Funariaceae; Physcomitrella; Physcomitrella patens; 
#=GS B8C4E7/128-226      AC B8C4E7
#=GS B8C4E7/128-226      OS Thalassiosira pseudonana
#=GS B8C4E7/128-226      DE U2 snRNP auxillary splicing factor, U2AF subunit
#=GS B8C4E7/128-226      DR ORG; Eukaryota; Bacillariophyta; Coscinodiscophyceae; Thalassiosirophycidae; Thalassiosirales; Thalassiosiraceae; Thalassiosira; Thalassiosira pseudonana; 
#=GS A0A1D6F7N0/360-475  AC A0A1D6F7N0
#=GS A0A1D6F7N0/360-475  OS Zea mays
#=GS A0A1D6F7N0/360-475  DE Splicing factor U2af large subunit A
#=GS A0A1D6F7N0/360-475  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Tripsacinae; Zea; Zea mays; 
#=GS A0A151L5U6/564-673  AC A0A151L5U6
#=GS A0A151L5U6/564-673  OS Plasmodium reichenowi
#=GS A0A151L5U6/564-673  DE Splicing factor U2AF large subunit, putative
#=GS A0A151L5U6/564-673  DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium reichenowi; 
#=GS A0A0L7M3I3/571-680  AC A0A0L7M3I3
#=GS A0A0L7M3I3/571-680  OS Plasmodium falciparum Dd2
#=GS A0A0L7M3I3/571-680  DE Uncharacterized protein
#=GS A0A0L7M3I3/571-680  DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS W4I761/424-533      AC W4I761
#=GS W4I761/424-533      OS Plasmodium falciparum NF135/5.C10
#=GS W4I761/424-533      DE Uncharacterized protein
#=GS W4I761/424-533      DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS W7FI96/571-680      AC W7FI96
#=GS W7FI96/571-680      OS Plasmodium falciparum Santa Lucia
#=GS W7FI96/571-680      DE Uncharacterized protein
#=GS W7FI96/571-680      DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS W4IWI2/571-680      AC W4IWI2
#=GS W4IWI2/571-680      OS Plasmodium falciparum Palo Alto/Uganda
#=GS W4IWI2/571-680      DE Uncharacterized protein
#=GS W4IWI2/571-680      DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS A0A0L7K5E1/571-680  AC A0A0L7K5E1
#=GS A0A0L7K5E1/571-680  OS Plasmodium falciparum HB3
#=GS A0A0L7K5E1/571-680  DE Uncharacterized protein
#=GS A0A0L7K5E1/571-680  DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS A0A024WZJ2/571-680  AC A0A024WZJ2
#=GS A0A024WZJ2/571-680  OS Plasmodium falciparum CAMP/Malaysia
#=GS A0A024WZJ2/571-680  DE Uncharacterized protein
#=GS A0A024WZJ2/571-680  DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS A0A024UZT8/571-680  AC A0A024UZT8
#=GS A0A024UZT8/571-680  OS Plasmodium falciparum Vietnam Oak-Knoll (FVO)
#=GS A0A024UZT8/571-680  DE Uncharacterized protein
#=GS A0A024UZT8/571-680  DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS A0A024WGI8/571-680  AC A0A024WGI8
#=GS A0A024WGI8/571-680  OS Plasmodium falciparum MaliPS096_E11
#=GS A0A024WGI8/571-680  DE Uncharacterized protein
#=GS A0A024WGI8/571-680  DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS A0A024VL26/571-680  AC A0A024VL26
#=GS A0A024VL26/571-680  OS Plasmodium falciparum FCH/4
#=GS A0A024VL26/571-680  DE Uncharacterized protein
#=GS A0A024VL26/571-680  DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS W7ETE1/571-680      AC W7ETE1
#=GS W7ETE1/571-680      OS Plasmodium falciparum 7G8
#=GS W7ETE1/571-680      DE Uncharacterized protein
#=GS W7ETE1/571-680      DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS W7JKE6/571-680      AC W7JKE6
#=GS W7JKE6/571-680      OS Plasmodium falciparum NF54
#=GS W7JKE6/571-680      DE Splicing factor U2AF large subunit
#=GS W7JKE6/571-680      DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS W7J3P8/571-680      AC W7J3P8
#=GS W7J3P8/571-680      OS Plasmodium falciparum UGT5.1
#=GS W7J3P8/571-680      DE Uncharacterized protein
#=GS W7J3P8/571-680      DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS A0A0L1ID10/571-680  AC A0A0L1ID10
#=GS A0A0L1ID10/571-680  OS Plasmodium falciparum IGH-CR14
#=GS A0A0L1ID10/571-680  DE U2 snRNP auxiliary factor
#=GS A0A0L1ID10/571-680  DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS A0A060S5V6/564-673  AC A0A060S5V6
#=GS A0A060S5V6/564-673  OS Plasmodium reichenowi
#=GS A0A060S5V6/564-673  DE U2 snRNP auxiliary factor, putative
#=GS A0A060S5V6/564-673  DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium reichenowi; 
#=GS A0A0L0CVW1/559-668  AC A0A0L0CVW1
#=GS A0A0L0CVW1/559-668  OS Plasmodium falciparum RAJ116
#=GS A0A0L0CVW1/559-668  DE U2 snRNP auxiliary factor
#=GS A0A0L0CVW1/559-668  DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS A0A024VXY5/523-632  AC A0A024VXY5
#=GS A0A024VXY5/523-632  OS Plasmodium falciparum Tanzania (2000708)
#=GS A0A024VXY5/523-632  DE Uncharacterized protein
#=GS A0A024VXY5/523-632  DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS A0A1D6F7N1/344-459  AC A0A1D6F7N1
#=GS A0A1D6F7N1/344-459  OS Zea mays
#=GS A0A1D6F7N1/344-459  DE Splicing factor U2af large subunit A
#=GS A0A1D6F7N1/344-459  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Tripsacinae; Zea; Zea mays; 
#=GF SQ 23
Q8IKE9/571-680              EKLRPSKPVNVK---------TSSDEENRLYIQNLPHDLKDEQIKDLLEQFGDLKAFNIIK-DLNTGLNKGYGFFEYEDSSCTQLAIHALNGFVCGQNILNVKKATFNK---QPTTITTNN-NM
A8J055/107-219              P-STPNPALNLAAIGL-----NPNDNPDRIFVGGLPYYLTEDQCRELLGSFGAIKSFDLVK-DRDTGNSKGYGFVVYQDTSVTDIACAGLNGLKMGDRTLTVRRATEGA----PGGGAAPAMGP
A9SNH7/279-371              ---------------L-----GGADGPDRIFVGGLPYYLSEEQIMDLLSSFGHLRAFDLVK-DRDTGNSKGYGFCVYQDPSVMDIACAALNGLKMGDRTLTVRRASARLRFGQP----------
B8C4E7/128-226              ---------------------TVHDGPNKIFVGGLPYHLVDSQVLELLSAFGAVKAFNLVKNDPMSDTSKGYCFVEYCDPNVTQIAAMGLNGMDMGGGKQPYQQPIVVK---DPMAVANAA-AS
A0A1D6F7N0/360-475          --SQPNPNLNLSAVGLTPGSAGGLEGPDRIFVGGLQYYFTEAQVRELLESFGPLRGFDLVK-DRETGNSKGYAFCVYQDLNVTDIACAALNGIKMGDKTLTVRRANQGASQPRPEQESI-----
A0A151L5U6/564-673          EKLRPSKPVNVK---------TSSDEENRLYIQNLPHDLKDEQIKDLLEQFGNLKAFNIIK-DLNTGLNKGYGFFEYEDSSCTQLAIHALNGFVCGQNILNVKKATFNK---QPTTITTNN-NM
A0A0L7M3I3/571-680          EKLRPSKPVNVK---------TSSDEENRLYIQNLPHDLKDEQIKDLLEQFGDLKAFNIIK-DLNTGLNKGYGFFEYEDSSCTQLAIHALNGFVCGQNILNVKKATFNK---QPTTITTNN-NM
W4I761/424-533              EKLRPSKPVNVK---------TSSDEENRLYIQNLPHDLKDEQIKDLLEQFGDLKAFNIIK-DLNTGLNKGYGFFEYEDSSCTQLAIHALNGFVCGQNILNVKKATFNK---QPTTITTNN-NM
W7FI96/571-680              EKLRPSKPVNVK---------TSSDEENRLYIQNLPHDLKDEQIKDLLEQFGDLKAFNIIK-DLNTGLNKGYGFFEYEDSSCTQLAIHALNGFVCGQNILNVKKATFNK---QPTTITTNN-NM
W4IWI2/571-680              EKLRPSKPVNVK---------TSSDEENRLYIQNLPHDLKDEQIKDLLEQFGDLKAFNIIK-DLNTGLNKGYGFFEYEDSSCTQLAIHALNGFVCGQNILNVKKATFNK---QPTTITTNN-NM
A0A0L7K5E1/571-680          EKLRPSKPVNVK---------TSSDEENRLYIQNLPHDLKDEQIKDLLEQFGDLKAFNIIK-DLNTGLNKGYGFFEYEDSSCTQLAIHALNGFVCGQNILNVKKATFNK---QPTTITTNN-NM
A0A024WZJ2/571-680          EKLRPSKPVNVK---------TSSDEENRLYIQNLPHDLKDEQIKDLLEQFGDLKAFNIIK-DLNTGLNKGYGFFEYEDSSCTQLAIHALNGFVCGQNILNVKKATFNK---QPTTITTNN-NM
A0A024UZT8/571-680          EKLRPSKPVNVK---------TSSDEENRLYIQNLPHDLKDEQIKDLLEQFGDLKAFNIIK-DLNTGLNKGYGFFEYEDSSCTQLAIHALNGFVCGQNILNVKKATFNK---QPTTITTNN-NM
A0A024WGI8/571-680          EKLRPSKPVNVK---------TSSDEENRLYIQNLPHDLKDEQIKDLLEQFGDLKAFNIIK-DLNTGLNKGYGFFEYEDSSCTQLAIHALNGFVCGQNILNVKKATFNK---QPTTITTNN-NM
A0A024VL26/571-680          EKLRPSKPVNVK---------TSSDEENRLYIQNLPHDLKDEQIKDLLEQFGDLKAFNIIK-DLNTGLNKGYGFFEYEDSSCTQLAIHALNGFVCGQNILNVKKATFNK---QPTTITTNN-NM
W7ETE1/571-680              EKLRPSKPVNVK---------TSSDEENRLYIQNLPHDLKDEQIKDLLEQFGDLKAFNIIK-DLNTGLNKGYGFFEYEDSSCTQLAIHALNGFVCGQNILNVKKATFNK---QPTTITTNN-NM
W7JKE6/571-680              EKLRPSKPVNVK---------TSSDEENRLYIQNLPHDLKDEQIKDLLEQFGDLKAFNIIK-DLNTGLNKGYGFFEYEDSSCTQLAIHALNGFVCGQNILNVKKATFNK---QPTTITTNN-NM
W7J3P8/571-680              EKLRPSKPVNVK---------TSSDEENRLYIQNIPHDLKDEQIKDLLEQFGDLKAFNIIK-DLNTGLNKGYGFFEYEDSSCTQLAIHALNGFVCGQNILNVKKATFNK---QPTTITTNN-NM
A0A0L1ID10/571-680          EKLRPSKPVNVK---------TSSDEENRLYIQNLPHDLKDEQIKDLLEQFGDLKAFNIIK-DLNTGLNKGYGFFEYEDSSCTQLAIHALNGFVCGQNILNVKKATFNK---QPTTITTNN-NM
A0A060S5V6/564-673          EKLRPSKPVNVK---------TSSDEENRLYIQNLPHDLKDEQIKDLLEQFGNLKAFNIIK-DLNTGLNKGYGFFEYEDSSCTQLAIHALNGFVCGQNILNVKKATFNK---QPTTITTNN-NM
A0A0L0CVW1/559-668          EKLRPSKPVNVK---------TSSDEENRLYIQNLPHDLKDEQIKDLLEQFGDLKAFNIIK-DLNTGLNKGYGFFEYEDSSCTQLAIHALNGFVCGQNILNVKKATFNK---QPTTITTNN-NM
A0A024VXY5/523-632          EKLRPSKPVNVK---------TSSDEENRLYIQNLPHDLKDEQIKDLLEQFGDLKAFNIIK-DLNTGLNKGYGFFEYEDSSCTQLAIHALNGFVCGQNILNVKKATFNK---QPTTITTNN-NM
A0A1D6F7N1/344-459          --SQPNPNLNLSAVGLTPGSAGGLEGPDRIFVGGLQYYFTEAQVRELLESFGPLRGFDLVK-DRETGNSKGYAFCVYQDLNVTDIACAALNGIKMGDKTLTVRRANQGASQPRPEQESI-----
#=GC scorecons              2133533335330001000005447556867755867474759647995499477696679094477469995945959465756944799954595457576675344000493334422022
#=GC scorecons_70           ________________________*__*****__***_*_*_*__***__**_**_*****_*__**__***_*__*_*_*_*_**__****___*___*_****________*__________
#=GC scorecons_80           ________________________*___*_*___*___*___*___**__**_**_*___*_*__**__***_*__*_*___*__*___***___*___*_*__*________*__________
#=GC scorecons_90           ____________________________*_____*_______*___**__**____*___*_*______***_*__*_*______*___***___*_________________*__________
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