# STOCKHOLM 1.0
#=GF ID 3.30.70.330/FF/000559
#=GF DE U11/U12 small nuclear ribonucleoprotein 65 kDa protein
#=GF AC 3.30.70.330/FF/000559
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 73.032
#=GS Q8RWV8/25-120       AC Q8RWV8
#=GS Q8RWV8/25-120       OS Arabidopsis thaliana
#=GS Q8RWV8/25-120       DE U11/U12 small nuclear ribonucleoprotein 65 kDa protein
#=GS Q8RWV8/25-120       DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana; 
#=GS Q8RWV8/25-120       DR GO; GO:0000398; GO:0005634; GO:0005689; GO:0010229; GO:0030626; GO:0097157; 
#=GS A0A1P8AMD5/25-120   AC A0A1P8AMD5
#=GS A0A1P8AMD5/25-120   OS Arabidopsis thaliana
#=GS A0A1P8AMD5/25-120   DE RNA-binding (RRM/RBD/RNP motifs) family protein
#=GS A0A1P8AMD5/25-120   DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana; 
#=GS A0A178W5L3/25-120   AC A0A178W5L3
#=GS A0A178W5L3/25-120   OS Arabidopsis thaliana
#=GS A0A178W5L3/25-120   DE Uncharacterized protein
#=GS A0A178W5L3/25-120   DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana; 
#=GS F6HYT0/14-112       AC F6HYT0
#=GS F6HYT0/14-112       OS Vitis vinifera
#=GS F6HYT0/14-112       DE Uncharacterized protein
#=GS F6HYT0/14-112       DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Vitales; Vitaceae; Viteae; Vitis; Vitis vinifera; 
#=GS D7SNK2/14-112       AC D7SNK2
#=GS D7SNK2/14-112       OS Vitis vinifera
#=GS D7SNK2/14-112       DE Uncharacterized protein
#=GS D7SNK2/14-112       DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Vitales; Vitaceae; Viteae; Vitis; Vitis vinifera; 
#=GS Q10M15/27-134       AC Q10M15
#=GS Q10M15/27-134       OS Oryza sativa Japonica Group
#=GS Q10M15/27-134       DE Os03g0326600 protein
#=GS Q10M15/27-134       DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa; 
#=GS A0A445GE95/17-112   AC A0A445GE95
#=GS A0A445GE95/17-112   OS Glycine soja
#=GS A0A445GE95/17-112   DE U11/U12 small nuclear ribonucleoprotein 65 kDa protein
#=GS A0A445GE95/17-112   DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja; Glycine soja; 
#=GS B9I5U9/32-130       AC B9I5U9
#=GS B9I5U9/32-130       OS Populus trichocarpa
#=GS B9I5U9/32-130       DE Uncharacterized protein
#=GS B9I5U9/32-130       DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Malpighiales; Salicaceae; Saliceae; Populus; Populus trichocarpa; 
#=GS A0A087HM67/28-121   AC A0A087HM67
#=GS A0A087HM67/28-121   OS Arabis alpina
#=GS A0A087HM67/28-121   DE Uncharacterized protein
#=GS A0A087HM67/28-121   DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Arabideae; Arabis; Arabis alpina; 
#=GS A0A1D6K1A4/3-115    AC A0A1D6K1A4
#=GS A0A1D6K1A4/3-115    OS Zea mays
#=GS A0A1D6K1A4/3-115    DE U11/U12 small nuclear ribonucleoprotein 65 kDa protein
#=GS A0A1D6K1A4/3-115    DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Tripsacinae; Zea; Zea mays; 
#=GS I1HH19/27-125       AC I1HH19
#=GS I1HH19/27-125       OS Brachypodium distachyon
#=GS I1HH19/27-125       DE Uncharacterized protein
#=GS I1HH19/27-125       DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Pooideae; Brachypodieae; Brachypodium; Brachypodium distachyon; 
#=GS I1ML41/17-112       AC I1ML41
#=GS I1ML41/17-112       OS Glycine max
#=GS I1ML41/17-112       DE Uncharacterized protein
#=GS I1ML41/17-112       DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja; Glycine max; 
#=GS A0A0E0CZW6/24-133   AC A0A0E0CZW6
#=GS A0A0E0CZW6/24-133   OS Oryza meridionalis
#=GS A0A0E0CZW6/24-133   DE Uncharacterized protein
#=GS A0A0E0CZW6/24-133   DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza meridionalis; 
#=GS I1PAX7/21-131       AC I1PAX7
#=GS I1PAX7/21-131       OS Oryza glaberrima
#=GS I1PAX7/21-131       DE Uncharacterized protein
#=GS I1PAX7/21-131       DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza glaberrima; 
#=GS A0A0E0NUH1/27-134   AC A0A0E0NUH1
#=GS A0A0E0NUH1/27-134   OS Oryza rufipogon
#=GS A0A0E0NUH1/27-134   DE Uncharacterized protein
#=GS A0A0E0NUH1/27-134   DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza rufipogon; 
#=GS A0A0D3FI00/21-131   AC A0A0D3FI00
#=GS A0A0D3FI00/21-131   OS Oryza barthii
#=GS A0A0D3FI00/21-131   DE Uncharacterized protein
#=GS A0A0D3FI00/21-131   DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza barthii; 
#=GS A0A0D9Z6N9/106-213  AC A0A0D9Z6N9
#=GS A0A0D9Z6N9/106-213  OS Oryza glumipatula
#=GS A0A0D9Z6N9/106-213  DE Uncharacterized protein
#=GS A0A0D9Z6N9/106-213  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza glumipatula; 
#=GS B4FG83/5-117        AC B4FG83
#=GS B4FG83/5-117        OS Zea mays
#=GS B4FG83/5-117        DE U11/U12 small nuclear ribonucleoprotein 65 kDa protein
#=GS B4FG83/5-117        DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Tripsacinae; Zea; Zea mays; 
#=GS A0A1D6K1A6/3-115    AC A0A1D6K1A6
#=GS A0A1D6K1A6/3-115    OS Zea mays
#=GS A0A1D6K1A6/3-115    DE U11/U12 small nuclear ribonucleoprotein 65 kDa protein
#=GS A0A1D6K1A6/3-115    DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Tripsacinae; Zea; Zea mays; 
#=GS A0A1D6K1A3/3-112    AC A0A1D6K1A3
#=GS A0A1D6K1A3/3-112    OS Zea mays
#=GS A0A1D6K1A3/3-112    DE U11/U12 small nuclear ribonucleoprotein 65 kDa protein
#=GS A0A1D6K1A3/3-112    DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Tripsacinae; Zea; Zea mays; 
#=GS B8ANG6/27-134       AC B8ANG6
#=GS B8ANG6/27-134       OS Oryza sativa Indica Group
#=GS B8ANG6/27-134       DE Uncharacterized protein
#=GS B8ANG6/27-134       DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa; 
#=GS A0A0E0CZW7/9-117    AC A0A0E0CZW7
#=GS A0A0E0CZW7/9-117    OS Oryza meridionalis
#=GS A0A0E0CZW7/9-117    DE Uncharacterized protein
#=GS A0A0E0CZW7/9-117    DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza meridionalis; 
#=GS A0A0Q3G0V6/27-125   AC A0A0Q3G0V6
#=GS A0A0Q3G0V6/27-125   OS Brachypodium distachyon
#=GS A0A0Q3G0V6/27-125   DE Uncharacterized protein
#=GS A0A0Q3G0V6/27-125   DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Pooideae; Brachypodieae; Brachypodium; Brachypodium distachyon; 
#=GF SQ 23
Q8RWV8/25-120               ---------------------------PF-GVTLLVRHLPDGIPHDIVSRLFSQYGASAVRPCSGGKLRNAAFVDFKNEAFASQAHRQLNG---LRFLGKVLQVQRANKPNDNKKSRQIEESVTKGN--
A0A1P8AMD5/25-120           ---------------------------PF-GVTLLVRHLPDGIPHDIVSRLFSQYGASAVRPCSGGKLRNAAFVDFKNEAFASQAHRQLNG---LRFLGKVLQVQRANKPNDNKKSRQIEESVTKGN--
A0A178W5L3/25-120           ---------------------------PF-GVTLLVRHLPDGIPHDIVSRLFSQYGASAVRPCSGGKLRNAAFVDFKNEAFASQAHRQLNG---LRFLGKVLQVQRANKPNDNKKSRQIEESVTKGN--
F6HYT0/14-112               -----------------------FEAEKS-AATLLIRHLPEAIPQDTLSRLFSSYGASSVRPSTSGRLRNCAFVDFKSEMLASQALRQLNG---LRFLGKVLLVERANKPTEDDKQKS-EALFGKDL--
D7SNK2/14-112               -----------------------FEAEKS-AATLLIRHLPEAIPQDTLSRLFSSYGASSVRPCTSGRLRNCAFVDFKSEMLASQALRQLNG---LRFLGKVLLVERANKPTEDDKQKS-EALFGKDL--
Q10M15/27-134               --------------PPQQQQQQPPGSAPP-AATLLVRHLPEAIPQEMLSRLFSHYGATSVRPCAGGKLRNCAFVDFRDEVVASQAQSLLNR---LRFLGKVLIVERANQPNSKNANEKQQEHEAQG---
A0A445GE95/17-112           ------------------------DAESAVPVTLLIKHLPEAIPHDTLSRIFANFGASFVRPCSSARLRNCAFADFKNEIVASQAQRQLNG---LRFLGKVLSAERASNPTENGEKSS-GDQLG-----
B9I5U9/32-130               --------------------------SQV-IVTLLIKHLPEDIPFDTLSRLFSHYGAFSVRPCNSGRLRNCAFVDFQSEGLAYQAHRQLNG---LRFLGKVLSVERASKLNEDSKFKQSEAQQGKDSVL
A0A087HM67/28-121           -------------------------------ITLLVRHLPDGIPHDIVSRLFSQYGASSVRPCSGGKLRNAAFVDFKNEAFASQAHRQLNG---LRFLGKVLQVQRANKPNENKKSRQVEESMAKGNA-
A0A1D6K1A4/3-115            ----PARARHIDRSASDQQQ----GPAPAGAATLLVRHLPEAITQEMLSRLFSHYGATSVRPCSGGKLRNCAFVDFRDEAAANHAHSLLNRFASLRFLGKVLTVERANCPNANESHLKHQD--------
I1HH19/27-125               ------------------------GSAPA-PATLLVRHLPEAITQDMLSRLFSHYGATAVRPGGGGKLRNCAFVDFKDEMAANQAQSLLNR---LRFLGKVLIVERANQPNAKNASEKHQEQLAHGM--
I1ML41/17-112               ------------------------DAESAVPVTLLIKHLPEAIPHDTLSRIFANFGASFVRPCSSARLRNCAFADFKNEIVASQAQRQLNG---LRFLGKVLSAERASNPTENGEKSS-GDQLG-----
A0A0E0CZW6/24-133           ----P--------PPQQQQQQPPPGSAPP-AATLLVRHLPEAIPQEMLSRLFSHYGATSVRPCAGGKLRNCAFVDFRDEVVASQAQSLLNR---LRFLGKVLIVERANQQNSKNANEKQQEQESQG---
I1PAX7/21-131               SLAPP--------PPPPQQQQPPPGSAPP-AATLLVRHLPEAIPQEMLSRLFSHYGATSVRPCAGGKLRNCAFVDFRDEVVASQAQSLLNR---LRFLGKVLIVERANQPNSKNANEKQQEHE------
A0A0E0NUH1/27-134           --------------PPQQQQQQPPGSAPP-AATLLVRHLPEAIPQEMLSRLFSHYGATSVRPCAGGKLRNCAFVDFRDEVVASQAQSLLNR---LRFLGKVLIVERANQPNSKNANEKQQEHEAQG---
A0A0D3FI00/21-131           SLAPP--------PPPPQQQQPPPGSAPP-AATLLVRHLPEAIPQEMLSRLFSHYGATSVRPCAGGKLRNCAFVDFRDEVVASQAQSLLNR---LRFLGKVLIVERANQPNSKNANEKQQEHE------
A0A0D9Z6N9/106-213          --------------PPPQQQQQPPGSAPP-AATLLVRHLPEAIPQEMLSRLFSHYGATSVRPCAGGKLRNCAFVDFRDEVVASQAQSLLNR---LRFLGKVLIVERANQPNSKNANEKQQEHEAQG---
B4FG83/5-117                ------RARHIDRSASDQQQ----GPAPAGAATLLVRHLPEAITQEMLSRLFSHYGATSVRPCSGGKLRNCAFVDFRDEAAANHAHSLLNR---LRFLGKVLTVERANCPNANESHLKHQDQLGHG---
A0A1D6K1A6/3-115            ----PARARHIDRSASDQQQ----GPAPAGAATLLVRHLPEAITQEMLSRLFSHYGATSVRPCSGGKLRNCAFVDFRDEAAANHAHSLLNRFASLRFLGKVLTVERANCPNANESHLKHQD--------
A0A1D6K1A3/3-112            ----PARARHIDRSASDQQQ----GPAPAGAATLLVRHLPEAITQEMLSRLFSHYGATSVRPCSGGKLRNCAFVDFRDEAAANHAHSLLNR---LRFLGKVLTVERANCPNANESHLKHQD--------
B8ANG6/27-134               --------------PPQQQQQQPPGSAPP-AATLLVRHLPEAIPQEMLSRLFSHYGATSVRPCAGGKLRNCAFVDFRDEVVASQAQSLLNR---LRFLGKVLIVERANQPNSKNANEKQQEHEAQG---
A0A0E0CZW7/9-117            -------------PPHQQQQQPPPGSAPP-AATLLVRHLPEAIPQEMLSRLFSHYGATSVRPCAGGKLRNCAFVDFRDEVVASQAQSLLNR---LRFLGKVLIVERANQQNSKNANEKQQEQESQG---
A0A0Q3G0V6/27-125           ------------------------GSAPA-PATLLVRHLPEAITQDMLSRLFSHYGATAVRPGGGGKLRNCAFVDFKDEMAANQAQSLLNR---LRFLGKVLIVERANQPNAKNASEKHQEQLAHGM--
#=GC scorecons              000000000000001101110000333530569997799976966757998975899559997567799969979965944967955599500099999999377997477454443525632223000
#=GC scorecons_70           ________________________________**************_******_***__****_*************_*__*_**___**____********_*****_**__________________
#=GC scorecons_80           ________________________________*********_*____******_***__****__*****_*****__*__*_**___**____********_*****_*___________________
#=GC scorecons_90           ________________________________***__***__*_____**_*__***__***_____***_**_**__*__*__*___**____********___**______________________
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