# STOCKHOLM 1.0
#=GF ID 3.30.70.2610/FF/000003
#=GF DE RNA polymerase II transcription factor B subunit 2
#=GF AC 3.30.70.2610/FF/000003
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 91.196
#=GS Q54C29/408-482      AC Q54C29
#=GS Q54C29/408-482      OS Dictyostelium discoideum
#=GS Q54C29/408-482      DE General transcription factor IIH subunit 4
#=GS Q54C29/408-482      DR ORG; Eukaryota; Dictyosteliales; Dictyosteliaceae; Dictyostelium; Dictyostelium discoideum; 
#=GS Q54C29/408-482      DR GO; GO:0005675; GO:0006289; GO:0006366; 
#=GS A8J1L5/379-435      AC A8J1L5
#=GS A8J1L5/379-435      OS Chlamydomonas reinhardtii
#=GS A8J1L5/379-435      DE RNA polymerase II transcription factor B subunit 2
#=GS A8J1L5/379-435      DR ORG; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Chlamydomonadaceae; Chlamydomonas; Chlamydomonas reinhardtii; 
#=GS T1FZW1/388-447      AC T1FZW1
#=GS T1FZW1/388-447      OS Helobdella robusta
#=GS T1FZW1/388-447      DE General transcription factor IIH subunit 4
#=GS T1FZW1/388-447      DR ORG; Eukaryota; Metazoa; Annelida; Clitellata; Hirudinea; Hirudinida; Glossiphoniiformes; Glossiphoniidae; Helobdella; Helobdella robusta; 
#=GS A0A0D0Y421/400-476  AC A0A0D0Y421
#=GS A0A0D0Y421/400-476  OS Cryptococcus gattii EJB2
#=GS A0A0D0Y421/400-476  DE RNA polymerase II transcription factor B subunit 2
#=GS A0A0D0Y421/400-476  DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Tremellomycetes; Tremellales; Cryptococcaceae; Cryptococcus; Cryptococcus gattii species complex; Cryptococcus gattii VGI; 
#=GS F0ZGU8/396-470      AC F0ZGU8
#=GS F0ZGU8/396-470      OS Dictyostelium purpureum
#=GS F0ZGU8/396-470      DE General transcription factor IIH subunit 4
#=GS F0ZGU8/396-470      DR ORG; Eukaryota; Dictyosteliales; Dictyosteliaceae; Dictyostelium; Dictyostelium purpureum; 
#=GS Q5K741/400-476      AC Q5K741
#=GS Q5K741/400-476      OS Cryptococcus neoformans var. neoformans JEC21
#=GS Q5K741/400-476      DE RNA polymerase II transcription factor B subunit 2
#=GS Q5K741/400-476      DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Tremellomycetes; Tremellales; Cryptococcaceae; Cryptococcus; Cryptococcus neoformans species complex; Cryptococcus neoformans; Cryptococcus neoformans var. neoformans; 
#=GS A0A0D0TSB5/361-437  AC A0A0D0TSB5
#=GS A0A0D0TSB5/361-437  OS Cryptococcus gattii VGII Ram5
#=GS A0A0D0TSB5/361-437  DE RNA polymerase II transcription factor B subunit 2
#=GS A0A0D0TSB5/361-437  DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Tremellomycetes; Tremellales; Cryptococcaceae; Cryptococcus; Cryptococcus gattii species complex; Cryptococcus gattii VGII; 
#=GS A0A0D0VB21/400-476  AC A0A0D0VB21
#=GS A0A0D0VB21/400-476  OS Cryptococcus gattii CA1280
#=GS A0A0D0VB21/400-476  DE RNA polymerase II transcription factor B subunit 2
#=GS A0A0D0VB21/400-476  DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Tremellomycetes; Tremellales; Cryptococcaceae; Cryptococcus; Cryptococcus gattii species complex; Cryptococcus gattii VGIII; 
#=GS A0A0D0YM62/400-476  AC A0A0D0YM62
#=GS A0A0D0YM62/400-476  OS Cryptococcus gattii VGIV IND107
#=GS A0A0D0YM62/400-476  DE RNA polymerase II transcription factor B subunit 2
#=GS A0A0D0YM62/400-476  DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Tremellomycetes; Tremellales; Cryptococcaceae; Cryptococcus; Cryptococcus gattii species complex; Cryptococcus gattii VGIV; 
#=GS J9VYV3/410-486      AC J9VYV3
#=GS J9VYV3/410-486      OS Cryptococcus neoformans var. grubii H99
#=GS J9VYV3/410-486      DE RNA polymerase II transcription factor B subunit 2
#=GS J9VYV3/410-486      DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Tremellomycetes; Tremellales; Cryptococcaceae; Cryptococcus; Cryptococcus neoformans species complex; Cryptococcus neoformans; Cryptococcus neoformans var. grubii; 
#=GS E6RG20/400-476      AC E6RG20
#=GS E6RG20/400-476      OS Cryptococcus gattii WM276
#=GS E6RG20/400-476      DE RNA polymerase II transcription factor B subunit 2
#=GS E6RG20/400-476      DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Tremellomycetes; Tremellales; Cryptococcaceae; Cryptococcus; Cryptococcus gattii species complex; Cryptococcus gattii VGI; 
#=GS A0A095DEJ9/361-437  AC A0A095DEJ9
#=GS A0A095DEJ9/361-437  OS Cryptococcus gattii VGII R265
#=GS A0A095DEJ9/361-437  DE RNA polymerase II transcription factor B subunit 2
#=GS A0A095DEJ9/361-437  DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Tremellomycetes; Tremellales; Cryptococcaceae; Cryptococcus; Cryptococcus gattii species complex; Cryptococcus gattii VGII; 
#=GS A0A226B9S8/410-486  AC A0A226B9S8
#=GS A0A226B9S8/410-486  OS Cryptococcus neoformans var. grubii Bt85
#=GS A0A226B9S8/410-486  DE RNA polymerase II transcription factor B subunit 2
#=GS A0A226B9S8/410-486  DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Tremellomycetes; Tremellales; Cryptococcaceae; Cryptococcus; Cryptococcus neoformans species complex; Cryptococcus neoformans; Cryptococcus neoformans var. grubii; 
#=GS A0A225XD67/410-486  AC A0A225XD67
#=GS A0A225XD67/410-486  OS Cryptococcus neoformans var. grubii c45
#=GS A0A225XD67/410-486  DE RNA polymerase II transcription factor B subunit 2
#=GS A0A225XD67/410-486  DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Tremellomycetes; Tremellales; Cryptococcaceae; Cryptococcus; Cryptococcus neoformans species complex; Cryptococcus neoformans; Cryptococcus neoformans var. grubii; 
#=GS Q55HK2/400-476      AC Q55HK2
#=GS Q55HK2/400-476      OS Cryptococcus neoformans var. neoformans B-3501A
#=GS Q55HK2/400-476      DE RNA polymerase II transcription factor B subunit 2
#=GS Q55HK2/400-476      DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Tremellomycetes; Tremellales; Cryptococcaceae; Cryptococcus; Cryptococcus neoformans species complex; Cryptococcus neoformans; Cryptococcus neoformans var. neoformans; 
#=GF SQ 15
Q54C29/408-482              D-VVAEQILLWEAERNRITYTKSVLYNSFPTNDCYIATLKFAKEQDYYIWSHDPLKTLVVKEEGNDPIRNFIKK--NF
A8J1L5/379-435              --VVSDQIRLWEASMNRLQAHPAVLYENMESRQLYERAVAAARAAGTLQWEDGA-RMRFV------------------
T1FZW1/388-447              H-TVTDQIMLWELERDRFRYAEGVMYSQFNAQSDFDMLRDYAKQLDVLIWENAQTRMLMVT-----------------
A0A0D0Y421/400-476          HPTIVDQLHLWDRERNRLQTEETVMYEFF-SKELFDDTVNEAKANAALQHAATSQKLLFIEPHTKPAITEFVKQRQNV
F0ZGU8/396-470              D-VVAEQILLWEQERNRITYTKSVLYNSFPTTDCYHATLKFAKEQDYYIWSNDQLKTLVVNENGNDPIRNFIKK--NF
Q5K741/400-476              HPTIVDQLYLWDRERNRLQTEETVMYEFF-SKELFDDTVNEAKANAALQHAAISQKLLFIEPHTKPAITEFVKQRQNV
A0A0D0TSB5/361-437          HPTIVDQLHLWDRERNRLQTEETVMYEFF-SKELFDDTVNEAKANAALQHAATSQKLLFIEPHTKPAITEFVKQRQNV
A0A0D0VB21/400-476          HPTIVDQLHLWDRERNRLQTDETVMYEFF-SKELFDDTVNEAKANAALQHAATSQKLLFIEPHTKPAITEFVKQRQNV
A0A0D0YM62/400-476          HPTIVDQLHLWDRERNRLQTEETVMYEFF-SKELFDDTVNEAKANAALQHAATSQKLLFIEPHTKPSITEFVKQRQNV
J9VYV3/410-486              HPTIVDQLHLWDRERNRLQTEETVMYEFF-SKELFDDTVNEAKANAALQHAATSQKLLFIEPHTKPAITEFVKQRQNV
E6RG20/400-476              HPTIVDQLHLWDRERNRLQTEETVMYEFF-SKELFDDTVNEAKANAALQHAATSQKLLFIEPHTKPAITEFVKQRQNV
A0A095DEJ9/361-437          HPTIVDQLHLWDRERNRLQTEETVMYEFF-SKELFDDTVNEAKANAALQHAATSQKLLFIEPHTKPAITEFVKQRQNV
A0A226B9S8/410-486          HPTIVDQLHLWDRERNRLQTEETVMYEFF-SKELFDDTVNEAKANAALQHAATSQKLLFIEPHTKPAITEFVKQRQNV
A0A225XD67/410-486          HPTIVDQLHLWDRERNRLQTEETVMYEFF-SKELFDDTVNEAKANAALQHAATSQKLLFIEPHTKPAITEFVKQRQNV
Q55HK2/400-476              HPTIVDQLYLWDRERNRLQTEETVMYEFF-SKELFDDTVNEAKANAALQHAATSQKLLFIEPHTKPAITEFVKQRQNV
#=GC scorecons              415747963997477795544549695370545475365439854436444444375657322232242343431142
#=GC scorecons_70           ___*_***_***_****______***__*_____*______**____________*_*_*__________________
#=GC scorecons_80           _____**__**____**______*_*__*_____*______**____________*______________________
#=GC scorecons_90           ______*__**_____*______*_*_______________*____________________________________
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