# STOCKHOLM 1.0
#=GF ID 3.30.450.20/FF/000116
#=GF DE period circadian protein homolog 3 isoform X2
#=GF AC 3.30.450.20/FF/000116
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 45.782
#=GS Q8TAR6/259-378      AC Q8TAR6
#=GS Q8TAR6/259-378      OS Homo sapiens
#=GS Q8TAR6/259-378      DE PER3 protein
#=GS Q8TAR6/259-378      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Homo; Homo sapiens; 
#=GS F7B4P6/301-433      AC F7B4P6
#=GS F7B4P6/301-433      OS Xenopus tropicalis
#=GS F7B4P6/301-433      DE Period circadian regulator 1
#=GS F7B4P6/301-433      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana; Xenopus tropicalis; 
#=GS M3W223/265-423      AC M3W223
#=GS M3W223/265-423      OS Felis catus
#=GS M3W223/265-423      DE Period circadian regulator 3
#=GS M3W223/265-423      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Laurasiatheria; Carnivora; Feliformia; Felidae; Felinae; Felis; Felis catus; 
#=GS A0A2U4AZU9/275-397  AC A0A2U4AZU9
#=GS A0A2U4AZU9/275-397  OS Tursiops truncatus
#=GS A0A2U4AZU9/275-397  DE period circadian protein homolog 3 isoform X3
#=GS A0A2U4AZU9/275-397  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Laurasiatheria; Cetacea; Odontoceti; Delphinidae; Tursiops; Tursiops truncatus; 
#=GS A0A287DCP7/240-359  AC A0A287DCP7
#=GS A0A287DCP7/240-359  OS Ictidomys tridecemlineatus
#=GS A0A287DCP7/240-359  DE Uncharacterized protein
#=GS A0A287DCP7/240-359  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Rodentia; Sciuromorpha; Sciuridae; Xerinae; Marmotini; Ictidomys; Ictidomys tridecemlineatus; 
#=GS A0A2K6EHP8/257-376  AC A0A2K6EHP8
#=GS A0A2K6EHP8/257-376  OS Propithecus coquereli
#=GS A0A2K6EHP8/257-376  DE Uncharacterized protein
#=GS A0A2K6EHP8/257-376  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Strepsirrhini; Lemuriformes; Indriidae; Propithecus; Propithecus coquereli; 
#=GS G7MGR3/267-386      AC G7MGR3
#=GS G7MGR3/267-386      OS Macaca mulatta
#=GS G7MGR3/267-386      DE Uncharacterized protein
#=GS G7MGR3/267-386      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Cercopithecoidea; Cercopithecidae; Cercopithecinae; Macaca; Macaca mulatta; 
#=GS G3QE83/240-359      AC G3QE83
#=GS G3QE83/240-359      OS Gorilla gorilla gorilla
#=GS G3QE83/240-359      DE Period circadian regulator 3
#=GS G3QE83/240-359      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Gorilla; Gorilla gorilla; Gorilla gorilla gorilla; 
#=GS G7NTC5/267-386      AC G7NTC5
#=GS G7NTC5/267-386      OS Macaca fascicularis
#=GS G7NTC5/267-386      DE Uncharacterized protein
#=GS G7NTC5/267-386      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Cercopithecoidea; Cercopithecidae; Cercopithecinae; Macaca; Macaca fascicularis; 
#=GS A0A2U4AZU7/275-397  AC A0A2U4AZU7
#=GS A0A2U4AZU7/275-397  OS Tursiops truncatus
#=GS A0A2U4AZU7/275-397  DE period circadian protein homolog 3 isoform X4
#=GS A0A2U4AZU7/275-397  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Laurasiatheria; Cetacea; Odontoceti; Delphinidae; Tursiops; Tursiops truncatus; 
#=GS G3SK97/257-376      AC G3SK97
#=GS G3SK97/257-376      OS Gorilla gorilla gorilla
#=GS G3SK97/257-376      DE Period circadian regulator 3
#=GS G3SK97/257-376      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Gorilla; Gorilla gorilla; Gorilla gorilla gorilla; 
#=GS A0A2U4AZX5/274-396  AC A0A2U4AZX5
#=GS A0A2U4AZX5/274-396  OS Tursiops truncatus
#=GS A0A2U4AZX5/274-396  DE period circadian protein homolog 3 isoform X2
#=GS A0A2U4AZX5/274-396  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Laurasiatheria; Cetacea; Odontoceti; Delphinidae; Tursiops; Tursiops truncatus; 
#=GS A0A2U4AZU5/275-397  AC A0A2U4AZU5
#=GS A0A2U4AZU5/275-397  OS Tursiops truncatus
#=GS A0A2U4AZU5/275-397  DE period circadian protein homolog 3 isoform X1
#=GS A0A2U4AZU5/275-397  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Laurasiatheria; Cetacea; Odontoceti; Delphinidae; Tursiops; Tursiops truncatus; 
#=GS A0A2U4AZV4/142-264  AC A0A2U4AZV4
#=GS A0A2U4AZV4/142-264  OS Tursiops truncatus
#=GS A0A2U4AZV4/142-264  DE period circadian protein homolog 3 isoform X8
#=GS A0A2U4AZV4/142-264  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Laurasiatheria; Cetacea; Odontoceti; Delphinidae; Tursiops; Tursiops truncatus; 
#=GS A0A2U4AZY0/197-319  AC A0A2U4AZY0
#=GS A0A2U4AZY0/197-319  OS Tursiops truncatus
#=GS A0A2U4AZY0/197-319  DE period circadian protein homolog 3 isoform X7
#=GS A0A2U4AZY0/197-319  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Laurasiatheria; Cetacea; Odontoceti; Delphinidae; Tursiops; Tursiops truncatus; 
#=GS A0A2K5WGU8/260-379  AC A0A2K5WGU8
#=GS A0A2K5WGU8/260-379  OS Macaca fascicularis
#=GS A0A2K5WGU8/260-379  DE Uncharacterized protein
#=GS A0A2K5WGU8/260-379  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Cercopithecoidea; Cercopithecidae; Cercopithecinae; Macaca; Macaca fascicularis; 
#=GS F6YMC9/260-379      AC F6YMC9
#=GS F6YMC9/260-379      OS Macaca mulatta
#=GS F6YMC9/260-379      DE Uncharacterized protein
#=GS F6YMC9/260-379      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Cercopithecoidea; Cercopithecidae; Cercopithecinae; Macaca; Macaca mulatta; 
#=GF SQ 17
Q8TAR6/259-378              HSGYEAPRIPVNKRIFTTTHTPGCVFLEVDEKAVPLLGYLPQDLIGTSILSYLHPEDRSLMVAIHQKVLKYAGHPPFEHSPIRFCTQNGDYIILDSSWSSFVNPWSRKISFIIGRHKVRT--------------------------------------------
F7B4P6/301-433              HSGYEAPRIPPDKRIFTTRHTPSCVFQEVDERAVPLLGYLPQDLIGMPVLLFIHPEDRPLMLAIHKKVLQQAGQ-PFDHSPIRLCARSGEYVTIDTSWSSFVNPWSRKVSFILGRHKVRTAPLSHSQATPLS------------------------------AG
M3W223/265-423              F--FITPRIPMDKRIFTTTHTPGCVFLEIDERAVSLPGYLPQDLLGTSILAYMHPEDRSLMVAIHQKVLKYAGHPPFEHSPIRFRTQNGDYVISDSSWSSFVNPWSQKVSFIIGRHKTNG--VSHT-VSPLNEDVFATRIKKTNHNDKDVTELQEQIHKLLLQT
A0A2U4AZU9/275-397          HSGYEAPRIPVDKRIFTTTHTPGCVFLEIDERAVPLLGYLPQDLIGTSILTYLHPEDRSLMVAIHQKVLKYAGHLPFEHSPIRFCSQNGDYIVLDSSWSSFVNPWSRKVSFIIGRHKVRT--VTF---------------------------------------
A0A287DCP7/240-359          HSGYEAPRIPVDKRIFTTTHTPGCVFLEIDERAVPLLGYLPQDLTGTSVLACLHPEDRPLMVTMHQKVLKYAGHPPFEHSPIRFCTQNGDYIILDSSWSSFVNPWSRKVSFIIGRHKVRT--------------------------------------------
A0A2K6EHP8/257-376          HSGYEAPRIPVDKRIFTTTHTPGCVFLEVDERAVPLLGYLPQDLIGTSILTYLHPEDRSLMVAIHQKVLKYAGHPPFEHSPIRFCTQNGDYIILDSSWSSFVNPWSRKVSFIIGRHKVQT--------------------------------------------
G7MGR3/267-386              HSGYEAPRIPVNKRIFTTTHTPGCVFLEVDERAVPLLGYLPQDLIGTSILSYLHPEDRSLMVAIHQKVLKYAGHPPFEHSPIRFCTQNGDYIILDSSWSSFVNPWSRKVSFIIGRHKVRT--------------------------------------------
G3QE83/240-359              HSGYEAPRIPVNKRIFTTTHTPGCVFLEVDEKAVPLLGYLPQDLIGTSILSYLHPEDRSLMVAIHQKVLKYAGHPPFEHSPIRFCTQNGDYIILDSSWSSFVNPWSRKVSFIIGRHKLVC--------------------------------------------
G7NTC5/267-386              HSGYEAPRIPVNKRIFTTTHTPGCVFLEVDERAVPLLGYLPQDLIGTSILSYLHPEDRSLMVAIHQKVLKYAGHPPFEHSPIRFCTQNGDYIILDSSWSSFVNPWSRKVSFIIGRHKVRT--------------------------------------------
A0A2U4AZU7/275-397          HSGYEAPRIPVDKRIFTTTHTPGCVFLEIDERAVPLLGYLPQDLIGTSILTYLHPEDRSLMVAIHQKVLKYAGHLPFEHSPIRFCSQNGDYIVLDSSWSSFVNPWSRKVSFIIGRHKVRT--VTF---------------------------------------
G3SK97/257-376              HSGYEAPRIPVNKRIFTTTHTPGCVFLEVDEKAVPLLGYLPQDLIGTSILSYLHPEDRSLMVAIHQKVLKYAGHPPFEHSPIRFCTQNGDYIILDSSWSSFVNPWSRKVSFIIGRHKVRT--------------------------------------------
A0A2U4AZX5/274-396          HSGYEAPRIPVDKRIFTTTHTPGCVFLEIDERAVPLLGYLPQDLIGTSILTYLHPEDRSLMVAIHQKVLKYAGHLPFEHSPIRFCSQNGDYIVLDSSWSSFVNPWSRKVSFIIGRHKVRT--VTF---------------------------------------
A0A2U4AZU5/275-397          HSGYEAPRIPVDKRIFTTTHTPGCVFLEIDERAVPLLGYLPQDLIGTSILTYLHPEDRSLMVAIHQKVLKYAGHLPFEHSPIRFCSQNGDYIVLDSSWSSFVNPWSRKVSFIIGRHKVRT--VTF---------------------------------------
A0A2U4AZV4/142-264          HSGYEAPRIPVDKRIFTTTHTPGCVFLEIDERAVPLLGYLPQDLIGTSILTYLHPEDRSLMVAIHQKVLKYAGHLPFEHSPIRFCSQNGDYIVLDSSWSSFVNPWSRKVSFIIGRHKVRT--VTF---------------------------------------
A0A2U4AZY0/197-319          HSGYEAPRIPVDKRIFTTTHTPGCVFLEIDERAVPLLGYLPQDLIGTSILTYLHPEDRSLMVAIHQKVLKYAGHLPFEHSPIRFCSQNGDYIVLDSSWSSFVNPWSRKVSFIIGRHKVRT--VTF---------------------------------------
A0A2K5WGU8/260-379          HSGYEAPRIPVNKRIFTTTHTPGCVFLEVDERAVPLLGYLPQDLIGTSILSYLHPEDRSLMVAIHQKVLKYAGHPPFEHSPIRFCTQNGDYIILDSSWSSFVNPWSRKVSFIIGRHKVRT--------------------------------------------
F6YMC9/260-379              HSGYEAPRIPVNKRIFTTTHTPGCVFLEVDERAVPLLGYLPQDLIGTSILSYLHPEDRSLMVAIHQKVLKYAGHPPFEHSPIRFCTQNGDYIILDSSWSSFVNPWSRKVSFIIGRHKVRT--------------------------------------------
#=GC scorecons              65576799995699999979997999697998996969999999697779476999997997889799977997499799999765779797659799999999997989997999965600211000000000000000000000000000000000000000
#=GC scorecons_70           *__*_*****_***************************************_***********************_**********_******__************************______________________________________________
#=GC scorecons_80           ___*__****__******_*******_*_*****_*_*******_*****_*_*****_***********_***_*********__*****___************_**********_______________________________________________
#=GC scorecons_90           ______****__******_***_***_*_**_**_*_*******_*___*___*****_**_***_***__**__**_*****_____*_*___*_**********_*****_****_______________________________________________
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