# STOCKHOLM 1.0
#=GF ID 3.30.420.10/FF/000181
#=GF DE RNase H
#=GF AC 3.30.420.10/FF/000181
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 84.547
#=GS Q09633/322-461      AC Q09633
#=GS Q09633/322-461      OS Caenorhabditis elegans
#=GS Q09633/322-461      DE RNase H
#=GS Q09633/322-461      DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis elegans; 
#=GS Q09633/322-461      DR GO; GO:0004523; GO:0090502; 
#=GS F4PBT1/22-171       AC F4PBT1
#=GS F4PBT1/22-171       OS Batrachochytrium dendrobatidis JAM81
#=GS F4PBT1/22-171       DE Uncharacterized protein
#=GS F4PBT1/22-171       DR ORG; Eukaryota; Fungi; Chytridiomycota; Chytridiomycetes; Rhizophydiales; Batrachochytrium; Batrachochytrium dendrobatidis; 
#=GS H3EWA1/10-146       AC H3EWA1
#=GS H3EWA1/10-146       OS Pristionchus pacificus
#=GS H3EWA1/10-146       DE Uncharacterized protein
#=GS H3EWA1/10-146       DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Diplogasteromorpha; Diplogasteroidea; Neodiplogasteridae; Pristionchus; Pristionchus pacificus; 
#=GS A0A2G5V1B5/375-514  AC A0A2G5V1B5
#=GS A0A2G5V1B5/375-514  OS Caenorhabditis nigoni
#=GS A0A2G5V1B5/375-514  DE Uncharacterized protein
#=GS A0A2G5V1B5/375-514  DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis nigoni; 
#=GS A8XGY9/343-481      AC A8XGY9
#=GS A8XGY9/343-481      OS Caenorhabditis briggsae
#=GS A8XGY9/343-481      DE Protein CBR-RNH-1.1
#=GS A8XGY9/343-481      DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis briggsae; 
#=GS A0A2G5V0I8/388-527  AC A0A2G5V0I8
#=GS A0A2G5V0I8/388-527  OS Caenorhabditis nigoni
#=GS A0A2G5V0I8/388-527  DE Uncharacterized protein
#=GS A0A2G5V0I8/388-527  DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis nigoni; 
#=GS A0A2G5V0H7/215-354  AC A0A2G5V0H7
#=GS A0A2G5V0H7/215-354  OS Caenorhabditis nigoni
#=GS A0A2G5V0H7/215-354  DE Uncharacterized protein
#=GS A0A2G5V0H7/215-354  DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis nigoni; 
#=GS H3EKT0/51-186       AC H3EKT0
#=GS H3EKT0/51-186       OS Pristionchus pacificus
#=GS H3EKT0/51-186       DE Uncharacterized protein
#=GS H3EKT0/51-186       DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Diplogasteromorpha; Diplogasteroidea; Neodiplogasteridae; Pristionchus; Pristionchus pacificus; 
#=GS A0A2A6CSB5/149-284  AC A0A2A6CSB5
#=GS A0A2A6CSB5/149-284  OS Pristionchus pacificus
#=GS A0A2A6CSB5/149-284  DE Uncharacterized protein
#=GS A0A2A6CSB5/149-284  DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Diplogasteromorpha; Diplogasteroidea; Neodiplogasteridae; Pristionchus; Pristionchus pacificus; 
#=GF SQ 9
Q09633/322-461              FPKGTLVMYTDGSYLK---RPPTSGIGIFVGPGHELNRSQRIRGPIQDNNYAEFIAVRTALQNALKNEN------YRDQKVVIRTDCLNVIEALQGTRPTAFVDVKSQVEFLSKQFPKG---VHFQHVYAHAGDPGNEMADLFAGQASSKSQ--
F4PBT1/22-171               -TVAHRLVYTDGSCLNNGRPDATGGIGIWFGTESAYNGGMVYPFPSPTNNACELFAVCMALAVVQEQSQLGTMELFEKLYVFTGSQYVLMGARRSDRMHAYNTKLWDMFHILMDSFQDWGCLVTIAKVAAHQGIRGNDEADRIARTYSEYT---
H3EWA1/10-146               ---PPIICYTDGSCREVNGKGVASGIGIYFGPAHPLNTSKRLDGPRHESGVAEIIAVQIALTKIHKWSG------FNNQSVIIRTDYMGIIDAMVNRNYGRFAEMYDDLRKSAEKFPSG---VTFDHVVSHEGEEGNEEADRLARMAIN-----
A0A2G5V1B5/375-514          --KGSLIMYTDGSYLK---REHRSGIGIFVAPGHELNRSQRIHGNIQDNNFAEFLAVKTALQNALKNET------YRNQKIVIRTDCLNVIEALKGIRGTAYPGLKNEVESLAKYFPKG---VDFQHVYAHEGDPGNELADTFAGIATGKSQGY
A8XGY9/343-481              ---SPTNMYTDGSYLK---REHRSGIGIFVAPGHELNRSQRIHGNIQDNNFAEFLAVKTALQNALKNET------YRNQKIVIRTDCLNVIEALSGVRGTSYPGLKSEVESLAKYFPKG---VDFQHVYAHEGDPGNELADMFAGIATGKSQGY
A0A2G5V0I8/388-527          --KGSLIMYTDGSYLK---REHRSGIGIFVAPGHELNRSQRIHGNIQDNNFAEFLAVKTALQNALKNET------YRNQKIVIRTDCLNVIEALKGIRGTAYPGLKNEVESLAKYFPKG---VDFQHVYAHEGDPGNELADTFAGIATGKSQGY
A0A2G5V0H7/215-354          --KGSLIMYTDGSYLK---REHRSGIGIFVAPGHELNRSQRIHGNIQDNNFAEFLAVKTALQNALKNET------YRNQKIVIRTDCLNVIEALKGIRGTAYPGLKNEVESLAKYFPKG---VDFQHVYAHEGDPGNELADTFAGIATGKSQGY
H3EKT0/51-186               SSNAPIIAYTDASCVD----GRASGIGIFFGDNHPLNTSKALAGPELNSGIGEIIAAQTALTNILQWKE------FKGQPVIIRTDYMGVIDAMNNGNYGRFSGLYADLRRLAERFPS----VTFEHVYGHDGERGNEMADELARDAIRL----
A0A2A6CSB5/149-284          SSNAPIIAYTDASCVD----GRASGIGIFFGDNHPLNTSKALAGPELNSGIGEIIAAQTALTNILQWKE------FKGQPVIIRTDYMGVIDAMNNGNYGRFSGLYADLRRLAERFPS----VTFEHVYGHDGERGNEMADELARDAIRL----
#=GC scorecons              0124445499969654000243479999656446469474443553446535955964599455553430000007446375767665366564353435354573445437553964300094647945959449973993595364322100
#=GC scorecons_70           ________******_________*****_____*_**_*_____________*__**__**______________*__*_*_*****__**_*___________*______*___**_____*_*_**__*_*__***_**__*__*_______
#=GC scorecons_80           ________***_*___________****________*_______________*__*___**______________*_______________________________________*______*____*__*_*__***_**__*__________
#=GC scorecons_90           ________***_*___________****________*_______________*__*___**______________________________________________________*______*____*__*_*__**__**__*__________
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