# STOCKHOLM 1.0 #=GF ID 3.30.420.10/FF/000142 #=GF DE Ribonuclease HII #=GF AC 3.30.420.10/FF/000142 #=GF TP FunFam #=GF DR CATH: v4.3 #=GF DR DOPS: 77.736 #=GS 4hhtA00/1-237 AC Q9X017 #=GS 4hhtA00/1-237 OS Thermotoga maritima MSB8 #=GS 4hhtA00/1-237 DE Ribonuclease HII #=GS 4hhtA00/1-237 DR CATH; 4hht; A:2-230; #=GS 4hhtA00/1-237 DR ORG; Bacteria; Thermotogae; Thermotogae; Thermotogales; Thermotogaceae; Thermotoga; Thermotoga maritima; #=GS 4hhtA00/1-237 DR EC; 3.1.26.4; #=GS 3o3hA00/1-222 AC Q9X017 #=GS 3o3hA00/1-222 OS Thermotoga maritima MSB8 #=GS 3o3hA00/1-222 DE Ribonuclease HII #=GS 3o3hA00/1-222 DR CATH; 3o3h; A:2-223; #=GS 3o3hA00/1-222 DR ORG; Bacteria; Thermotogae; Thermotogae; Thermotogales; Thermotogaceae; Thermotoga; Thermotoga maritima; #=GS 3o3hA00/1-222 DR EC; 3.1.26.4; #=GS 3o3gA00/1-222 AC Q9X017 #=GS 3o3gA00/1-222 OS Thermotoga maritima MSB8 #=GS 3o3gA00/1-222 DE Ribonuclease HII #=GS 3o3gA00/1-222 DR CATH; 3o3g; A:2-223; #=GS 3o3gA00/1-222 DR ORG; Bacteria; Thermotogae; Thermotogae; Thermotogales; Thermotogaceae; Thermotoga; Thermotoga maritima; #=GS 3o3gA00/1-222 DR EC; 3.1.26.4; #=GS 3o3fA00/1-222 AC Q9X017 #=GS 3o3fA00/1-222 OS Thermotoga maritima MSB8 #=GS 3o3fA00/1-222 DE Ribonuclease HII #=GS 3o3fA00/1-222 DR CATH; 3o3f; A:2-223; #=GS 3o3fA00/1-222 DR ORG; Bacteria; Thermotogae; Thermotogae; Thermotogales; Thermotogaceae; Thermotoga; Thermotoga maritima; #=GS 3o3fA00/1-222 DR EC; 3.1.26.4; #=GS 2etjA00/1-233 AC Q9X017 #=GS 2etjA00/1-233 OS Thermotoga maritima MSB8 #=GS 2etjA00/1-233 DE Ribonuclease HII #=GS 2etjA00/1-233 DR CATH; 2etj; A:2-221; #=GS 2etjA00/1-233 DR ORG; Bacteria; Thermotogae; Thermotogae; Thermotogales; Thermotogaceae; Thermotoga; Thermotoga maritima; #=GS 2etjA00/1-233 DR EC; 3.1.26.4; #=GS Q9X017/1-221 AC Q9X017 #=GS Q9X017/1-221 OS Thermotoga maritima MSB8 #=GS Q9X017/1-221 DE Ribonuclease HII #=GS Q9X017/1-221 DR ORG; Bacteria; Thermotogae; Thermotogae; Thermotogales; Thermotogaceae; Thermotoga; Thermotoga maritima; #=GS Q9X017/1-221 DR EC; 3.1.26.4; #=GS G4FCR1/1-221 AC G4FCR1 #=GS G4FCR1/1-221 OS Thermotoga maritima MSB8 #=GS G4FCR1/1-221 DE Ribonuclease HII #=GS G4FCR1/1-221 DR ORG; Bacteria; Thermotogae; Thermotogae; Thermotogales; Thermotogaceae; Thermotoga; Thermotoga maritima; #=GS G4FCR1/1-221 DR EC; 3.1.26.4; #=GS Q8PAW7/16-231 AC Q8PAW7 #=GS Q8PAW7/16-231 OS Xanthomonas campestris pv. campestris str. ATCC 33913 #=GS Q8PAW7/16-231 DE Ribonuclease HII #=GS Q8PAW7/16-231 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas; Xanthomonas campestris; #=GS Q8PAW7/16-231 DR EC; 3.1.26.4; #=GS B8E2G1/8-203 AC B8E2G1 #=GS B8E2G1/8-203 OS Dictyoglomus turgidum DSM 6724 #=GS B8E2G1/8-203 DE Ribonuclease HII #=GS B8E2G1/8-203 DR ORG; Bacteria; Dictyoglomi; Dictyoglomia; Dictyoglomales; Dictyoglomaceae; Dictyoglomus; Dictyoglomus turgidum; #=GS B5YK98/3-200 AC B5YK98 #=GS B5YK98/3-200 OS Thermodesulfovibrio yellowstonii DSM 11347 #=GS B5YK98/3-200 DE Ribonuclease HII #=GS B5YK98/3-200 DR ORG; Bacteria; Nitrospirae; Nitrospira; Nitrospirales; Nitrospiraceae; Thermodesulfovibrio; Thermodesulfovibrio yellowstonii; #=GS A8HV47/1-196 AC A8HV47 #=GS A8HV47/1-196 OS Chlamydomonas reinhardtii #=GS A8HV47/1-196 DE Ribonuclease #=GS A8HV47/1-196 DR ORG; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Chlamydomonadaceae; Chlamydomonas; Chlamydomonas reinhardtii; #=GS A5IIL8/1-221 AC A5IIL8 #=GS A5IIL8/1-221 OS Thermotoga petrophila RKU-1 #=GS A5IIL8/1-221 DE Ribonuclease HII #=GS A5IIL8/1-221 DR ORG; Bacteria; Thermotogae; Thermotogae; Thermotogales; Thermotogaceae; Thermotoga; Thermotoga petrophila; #=GS A5IIL8/1-221 DR EC; 3.1.26.4; #=GS B1LC19/1-221 AC B1LC19 #=GS B1LC19/1-221 OS Thermotoga sp. RQ2 #=GS B1LC19/1-221 DE Ribonuclease HII #=GS B1LC19/1-221 DR ORG; Bacteria; Thermotogae; Thermotogae; Thermotogales; Thermotogaceae; Thermotoga; Thermotoga sp. RQ2; #=GS B1LC19/1-221 DR EC; 3.1.26.4; #=GS A0A101ERA8/1-221 AC A0A101ERA8 #=GS A0A101ERA8/1-221 OS Thermotoga naphthophila #=GS A0A101ERA8/1-221 DE Ribonuclease HII #=GS A0A101ERA8/1-221 DR ORG; Bacteria; Thermotogae; Thermotogae; Thermotogales; Thermotogaceae; Thermotoga; Thermotoga naphthophila; #=GS A0A101ERA8/1-221 DR EC; 3.1.26.4; #=GS A0A101FBT2/1-221 AC A0A101FBT2 #=GS A0A101FBT2/1-221 OS Thermotoga sp. 47_83 #=GS A0A101FBT2/1-221 DE Ribonuclease HII #=GS A0A101FBT2/1-221 DR ORG; Bacteria; Thermotogae; Thermotogae; Thermotogales; Thermotogaceae; Thermotoga; Thermotoga sp. 47_83; #=GS A0A101FBT2/1-221 DR EC; 3.1.26.4; #=GS D2C584/1-221 AC D2C584 #=GS D2C584/1-221 OS Thermotoga naphthophila RKU-10 #=GS D2C584/1-221 DE Ribonuclease HII #=GS D2C584/1-221 DR ORG; Bacteria; Thermotogae; Thermotogae; Thermotogales; Thermotogaceae; Thermotoga; Thermotoga naphthophila; #=GS D2C584/1-221 DR EC; 3.1.26.4; #=GS Q4USP6/16-231 AC Q4USP6 #=GS Q4USP6/16-231 OS Xanthomonas campestris pv. campestris str. 8004 #=GS Q4USP6/16-231 DE Ribonuclease HII #=GS Q4USP6/16-231 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas; Xanthomonas campestris; #=GS Q4USP6/16-231 DR EC; 3.1.26.4; #=GS B0RW80/17-231 AC B0RW80 #=GS B0RW80/17-231 OS Xanthomonas campestris pv. campestris str. B100 #=GS B0RW80/17-231 DE Ribonuclease HII #=GS B0RW80/17-231 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas; Xanthomonas campestris; #=GS B0RW80/17-231 DR EC; 3.1.26.4; #=GF SQ 18 4hhtA00/1-237 -------------GIDELYK-KEFGIVAGVDEASRGCLAGPVVAAAVVLEKE-------IEGINDSKQLSPAKRERLLDEIMEKAAV--GIGIASPEEIDLYNIFNATKLAMNRALENLSVKP---SFVLVDGKGI--ELSVPGTCLVKGDQKSKLIGAASIVAKVFRDRLMSEFHRMYPQFSFHKHKGYATKEHLNEIRKNGVLPIHRLSFEPVLELLTDDLLREFFEKGLISENRFERILNLLGARKSVVFRKERTNHNLPLF 3o3hA00/1-222 -------------GIDELYK-KEFGIVAGVDEAGRGCLAGPVVAAAVVLEKE-------IEGINDSKQLSPAKRERLLDEIMEKAAV--GIGIASPEEIDLYNIFNATKLAMNRALENLSVKP---SFVLVNGKGI--ELSVPGTCLVKGDQKSKLIGAASIVAKVFRDRLMSEFHRMYPQFSFHKHKGYATKEHLNEIRKNGVLPIHRLSFEPVLELLTDDLLREFFEKGLISENRFERILNLLGARKS--------------- 3o3gA00/1-222 -------------GIDELYK-KEFGIVAGVDEAGRGCLAGPVVAAAVVLEKE-------IEGINDSKQLSPAKRERLLDEIMEKAAV--GIGIASPEEIDLYNIFNATKLAMNRALENLSVKP---SFVLVDGKGI--ELSVPGTCLVKGDQKSKLIGAASIVAKVFRDRLMSEFHRMYPQFSFHKHKGYATKEHLNEIRKNGVLPIHRLSFEPVLELLTDDLLREFFEKGLISENRFERILNLLGARKS--------------- 3o3fA00/1-222 -------------GIDELYK-KEFGIVAGVDEAGRGCLAGPVVAAAVVLEKE-------IEGINDSKQLSPAKRERLLDEIMEKAAV--GIGIASPEEIDLYNIFNATKLAMNRALENLSVKP---SFVLVNGKGI--ELSVPGTCLVKGDQKSKLIGAASIVAKVFRDRLMSEFHRMYPQFSFHKHKGYATKEHLNEIRKNGVLPIHRLSFEPVLELLTDDLLREFFEKGLISENRFERILNLLGARKS--------------- 2etjA00/1-233 XGSDKIHHHHHHXGIDELYK-KEFGIVAGVDEAGRGCLAGPVVAAAVVLEKE-------IEGINDSKQLSPAKRERLLDEIXEKAAV--GIGIASPEEIDLYNIFNATKLAXNRALENLSVKP---SFVLVDGKGI--ELSVPGTCLVKGDQKSKLIGAASIVAKVFRDRLXSEFHRXYPQFSFHKHKGYATKEHLNEIRKNGVLPIHRLSFEPVLELLTDDLLREFFEKGLISENRFERILNLLGAR----------------- Q9X017/1-221 ------------MGIDELYK-KEFGIVAGVDEAGRGCLAGPVVAAAVVLEKE-------IEGINDSKQLSPAKRERLLDEIMEKAAV--GIGIASPEEIDLYNIFNATKLAMNRALENLSVKP---SFVLVDGKGI--ELSVPGTCLVKGDQKSKLIGAASIVAKVFRDRLMSEFHRMYPQFSFHKHKGYATKEHLNEIRKNGVLPIHRLSFEPVLELLTDDLLREFFEKGLISENRFERILNLLGAR----------------- G4FCR1/1-221 ------------MGIDELYK-KEFGIVAGVDEAGRGCLAGPVVAAAVVLEKE-------IEGINDSKQLSPAKRERLLDEIMEKAAV--GIGIASPEEIDLYNIFNATKLAMNRALENLSVKP---SFVLVDGKGI--ELSVPGTCLVKGDQKSKLIGAASIVAKVFRDRLMSEFHRMYPQFSFHKHKGYATKEHLNEIRKNGVLPIHRLSFEPVLELLTDDLLREFFEKGLISENRFERILNLLGAR----------------- Q8PAW7/16-231 ---------QNALFTDSPFPTPESRLIAGVDEAGRGPLAGPVAVAAVVFDPAK----PRINGLDDSKQLSAERREQLYARIVDRALA-WSVVLIDSEEIDRINIYQATMLGMRRAVEGVAHVA---GFARIDGNRVPKGLPCPAEALIGGDALDRAIMAASIVAKVTRDRLMRELHAQHPQYRFDLHKGYSTPAHLAALQTHGPCPQHRRSFAPVRRALG-----------------------LETAQTA---------WDVPCA B8E2G1/8-203 ---------PRTLGERERELWYYFRYIAGVDEAGRGALAGPVYAGAVILPPLS----SI--PVNDSKLLSPKEREELFEIIKKEALC-WSFGYATVEEIEELGILKATLLAMRRAIEKLEIKP---EYLLVDGNIPIPNMDIPQETIVKGDRKCLSIASASIVAKVLRDRYMKELDKEYPGYGFSRHKGYATKEHREKIKSLGSLLIHRKGFKLL-------------------------------------------------- B5YK98/3-200 -----------LFAFDESFRLQGYNLIAGIDEAGRGCLAGPVVAACVSFRDSV-----FIEGIKDSKELSHEQRESLFQEIIKHAFV--GIGIVDVDLIDRVNILEATRLAMMEAFENLGREI---ELLLIDAVELP-ALKVDQKALIKGDRKSASIASASIVAKVTRDRIMRQYHEAYPMYGFDKHKGYGTKEHLNALKKFGPCPIHRKSFSPVRELML--------------------------------------------- A8HV47/1-196 --------------------------VGGADEAGRGPLAGPVVAAVCVLPHQSDTSWQMPAGLNDSKAITEDEREAIFEALTTDSRVRWAVSIIDHETIDRINILQAALSAMRNSALDVHGQAPGLDYLLVDGNKLPKDLPCPARAVVKGDATVACIAAASIIAKVTRDRLMLELDKQYPQYGFAQHKGYGVPQHMAAIHTHGPSAVHRRSFEPVKSMTG-------------------------------------------AL A5IIL8/1-221 ------------MGIDELYK-KEFGIVAGVDEAGRGCLAGPVVAAAVVLEKE-------IEGINDSKQLSPAKRERLFDEIMGKAAV--GIGIASPEEIDLHNIFNATKLAMNRALENLSVGP---SFVLVDGKGI--ELRVPGTCLVKGDQKSKLIGAASIVAKVFRDRLMSEFHKMYPQFSFHKHKGYATKEHLNEIRKNGVLPIHRMSFEPVLELLTDDLLREFFEKGLISENRFEHIKNLLEAK----------------- B1LC19/1-221 ------------MGIDELYK-KEFGIVAGVDEAGRGCLAGPVVAAAVVLEKE-------IEGINDSKQLSPAKRERLFDEIMGKAAV--GIGIASPEEIDLHNIFNATKLAMNRALENLSVGP---SFVLVDGKGI--ELRVPGTCLVKGDQKSKLIGAASIVAKVFRDRLMSEFHKMYPQFSFHKHKGYATKEHLNEIRKNGVLPIHRMSFEPVLELLTDDLLREFFEKGLISENRFEHIKNLLEAK----------------- A0A101ERA8/1-221 ------------MGIDELYK-KEFGIVAGVDEAGRGCLAGPVVAAAVVLEKE-------IEGINDSKQLSPAKRERLFDEIMGKAAV--GIGIASPEEIDLHNIFNATKLAMNRALENLSVGP---SFVLVDGKGI--ELRVPGTCLVKGDQKSKLIGAASIVAKVFRDRLMSEFHKMYPQFSFHKHKGYATKEHLNEIRKNGVLPIHRMSFEPVLELLTDDLLREFFEKGLISENRFEHIKNLLEAK----------------- A0A101FBT2/1-221 ------------MGIDELYK-KEFGIVAGVDEAGRGCLAGPVVAAAVVLEKE-------IEGINDSKQLSPAKRERLFDEIMGKAAV--GIGIASPEEIDLHNIFNATKLAMNRALENLSVGP---SFVLVDGKGI--ELRVPGTCLVKGDQKSKLIGAASIVAKVFRDRLMSEFHKMYPQFSFHKHKGYATKEHLNEIRKNGVLPIHRMSFEPVLELLTDDLLREFFEKGLISENRFEHIKNLLEAK----------------- D2C584/1-221 ------------MGIDELYK-KEFGIVAGVDEAGRGCLAGPVVAAAVVLEKE-------IEGINDSKQLSPAKRERLFDEIMGKAAV--GIGIASPEEIDLHNIFNATKLAMNRALENLSVGP---SFVLVDGKGI--ELRVPGTCLVKGDQKSKLIGAASIVAKVFRDRLMSEFHKMYPQFSFHKHKGYATKEHLNEIRKNGVLPIHRMSFEPVLELLTDDLLREFFEKGLISENRFEHIKNLLEAK----------------- Q4USP6/16-231 ---------QNALFTDSPFPTPESRLIAGVDEAGRGPLAGPVAVAAVVFDPAK----PRINGLDDSKQLSAERREQLYARIVDRALA-WSVVLIDSEEIDRINIYQATMLGMRRAVEGVAHVA---GFARIDGNRVPKGLPCPAEALIGGDALDRAIMAASIVAKVTRDRLMRELHAQHPQYRFDLHKGYSTPAHLAALQTHGPCPQHRRSFAPVRRALG-----------------------LETAQTA---------WDVPCA B0RW80/17-231 ----------NALFTDSPFPTPDSRLIAGVDEAGRGPLAGPVAVAAVVFDPAK----PRINGLDDSKQLSAERREQLYARIVDRALA-WSVVLIDSEEIDRINIYQATMLGMRRAVEGVAHVA---GFARIDGNRVPKGLPFPAEALIGGDALDRAIMAASIVAKVTRDRLMRELHAQHPEYRFDLHKGYSTPAHLAALQTHGPCPQHRRSFAPVRRALG-----------------------LETAQTA---------WDVPCA #=GC scorecons 0000000000002336434303444477979998994999995686776444000000064766999587545994854484457450156565548698437955984768567575643350004755788545115844754577699454449479998999499978486643796749449999575596556554954659948957834454111111111111111111111114224200000000000000000 #=GC scorecons_70 __________________________**********_*****_******____________*_****_**___**_*___*___*_____*_____****__**__**_***_**_*_*________*__***______*__*___*****_____*_********_*****_*_*__**_*_*__****_*__**__*___*__*_**_**_**__________________________________________________ #=GC scorecons_80 ___________________________*********_*****__*_**_____________*__***_**___**_*___*___*___________*_**__**__**_*_*__*_*__________*__***______*__*___**_**_____*_********_***_*_*____**_*_*__****_*__*_______*____**_**_**__________________________________________________ #=GC scorecons_90 ____________________________*_******_*****______________________***______**_____________________*_**___*__*____*___________________**______*_________**_____*__*******_***_*_*_____*___*__****____*_______*____**__*__*__________________________________________________ //