# STOCKHOLM 1.0
#=GF ID 3.30.2350.20/FF/000030
#=GF DE tRNA pseudouridine synthase D
#=GF AC 3.30.2350.20/FF/000030
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 75.951
#=GS O67616/192-382          AC O67616
#=GS O67616/192-382          OS Aquifex aeolicus VF5
#=GS O67616/192-382          DE tRNA pseudouridine synthase D
#=GS O67616/192-382          DR ORG; Bacteria; Aquificae; Aquificae; Aquificales; Aquificaceae; Aquifex; Aquifex aeolicus; 
#=GS O67616/192-382          DR EC; 5.4.99.27; 
#=GS Q17426/334-534          AC Q17426
#=GS Q17426/334-534          OS Caenorhabditis elegans
#=GS Q17426/334-534          DE Putative pseudouridine synthase B0024.11
#=GS Q17426/334-534          DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis elegans; 
#=GS H3DVP4/374-535_577-607  AC H3DVP4
#=GS H3DVP4/374-535_577-607  OS Pristionchus pacificus
#=GS H3DVP4/374-535_577-607  DE Uncharacterized protein
#=GS H3DVP4/374-535_577-607  DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Diplogasteromorpha; Diplogasteroidea; Neodiplogasteridae; Pristionchus; Pristionchus pacificus; 
#=GS A0A2G5TIT9/333-532      AC A0A2G5TIT9
#=GS A0A2G5TIT9/333-532      OS Caenorhabditis nigoni
#=GS A0A2G5TIT9/333-532      DE Uncharacterized protein
#=GS A0A2G5TIT9/333-532      DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis nigoni; 
#=GS B6IHF5/333-532          AC B6IHF5
#=GS B6IHF5/333-532          OS Caenorhabditis briggsae
#=GS B6IHF5/333-532          DE Protein CBG27079
#=GS B6IHF5/333-532          DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis briggsae; 
#=GF SQ 5
O67616/192-382                  LRKAWRDWDRFLSLMPKGAKPELEVVKALRRGESFKN----AFMVLPKNIRLMFVFAYQSYLWNRYLYTFVVRYLKYCKTPFLKWELAFFNDMSEVIWEEIK--DLEIPYLGVEYKPRNKKAEIVMKEVLQDEGITPKMLMAERIGIKLFSDGV----RKAFFKPQGLK--------------------VIEERK-----NSLKLSFTLPPGSYATILLRKLFCSD-
Q17426/334-534                  ---KLKG-----AQAFATV--EGNILKCLSKGGTWQNCITEAI---PIQSRSLYVHAYQSLIWNKVASRRVKEY------GTRVHESDVGANGFSLG-EHATHYDIHIPLPGENLPFEGSYGAKWISELLEEDGLTQSSFTALKDRFSL-GESS----RCLFVEAKELKWKFIRYGNARDLLQDGLQTRAIPEAEQKGPLLALQIQFSLISGSYATVALREVTGSD-
H3DVP4/374-535_577-607          -RLALRD-----NRAPIGA--RCNRPAAAAAAAADEACGWEAVLWLPPNIRSLYVHAYQSLLWNKLASERVVAT------GVAVLEGDVDTDANVLPKADSSPFQVCVPLPNSACAEREGWVFDEYKKVLETDGISWDSFRTLEKNFSL-GDSSKLILRPLFLRPGNVEWKFVRGRG--------------PEAK-----LALWMRFDLPSGCYATVALREITACDM
A0A2G5TIT9/333-532              ----LKG-----AQAFATV--EGQILKCLTRGGTWQKCITEAV---PIQSRSLYVHAYQSLLWNKVASRRVKEY------GTRVHESDVGADGNPLG-EHSTHYDIHIALPGENSAFENSYGAKWISELLKEDGLTPASFTSLQDKFSL-GESS----RPLFVEAKELKWKFIHYEQPRALLQDGLQTRAIPESEQKGPLLALQIQLSLSSGSYATVALREVTGYD-
B6IHF5/333-532                  ----LKG-----AQAFATV--EGQILKCLTRGGTWQKCITEAI---PIQSRSLYVHAYQSLLWNKVASRRVKEY------GTRVHESDVGADGKPLG-EHSTHYDIHIALPGENSAFENSYGAKWISELLKEDGLTPASFTSLRDKFSL-GESS----RPLFVEAKELKWKFIHYEQPRAFLQDGLQTRAIPESEQKGPLLALQIQFSLSSGSYATVALREVTGYD-
#=GC scorecons                  01025650000043543550062444545346442444114940019254956795999957997355349435000000533429355247332630544323653765563434254334232346594479563356344433559066650000935944544664443211101011111111124593511111469354749469699975996553490
#=GC scorecons_70               _____*_________________________*_________*____*___*_***_****_****_____*______________*_____*___*___________*___________________*_*__**_*___*________*__*______*__*_____**_______________________*_________*___*_*__******_**_____*_
#=GC scorecons_80               _________________________________________*____*___*__**_****_***______*______________*_____*_______________*_____________________*___*______________*_________*__*______________________________*_________*___*_*__*_***__**_____*_
#=GC scorecons_90               _________________________________________*____*___*___*_****__**______*______________*___________________________________________*___*______________*_________*__*______________________________*_________*_____*__*_***__**_____*_
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