# STOCKHOLM 1.0
#=GF ID 3.30.2350.20/FF/000024
#=GF DE tRNA pseudouridine synthase D, putative
#=GF AC 3.30.2350.20/FF/000024
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 76.458
#=GS D0MSB3/315-505        AC D0MSB3
#=GS D0MSB3/315-505        OS Phytophthora infestans T30-4
#=GS D0MSB3/315-505        DE tRNA pseudouridine synthase D (TruD), putative
#=GS D0MSB3/315-505        DR ORG; Eukaryota; Oomycetes; Peronosporales; Peronosporaceae; Phytophthora; Phytophthora infestans; 
#=GS T1FXC4/42-66_108-268  AC T1FXC4
#=GS T1FXC4/42-66_108-268  OS Helobdella robusta
#=GS T1FXC4/42-66_108-268  DE Uncharacterized protein
#=GS T1FXC4/42-66_108-268  DR ORG; Eukaryota; Metazoa; Annelida; Clitellata; Hirudinea; Hirudinida; Glossiphoniiformes; Glossiphoniidae; Helobdella; Helobdella robusta; 
#=GS F6PJM3/111-310        AC F6PJM3
#=GS F6PJM3/111-310        OS Ciona intestinalis
#=GS F6PJM3/111-310        DE Uncharacterized protein
#=GS F6PJM3/111-310        DR ORG; Eukaryota; Metazoa; Chordata; Tunicata; Ascidiacea; Enterogona; Phlebobranchia; Cionidae; Ciona; Ciona intestinalis; 
#=GS B7QGJ0/60-288         AC B7QGJ0
#=GS B7QGJ0/60-288         OS Ixodes scapularis
#=GS B7QGJ0/60-288         DE tRNA pseudouridine synthase D, putative
#=GS B7QGJ0/60-288         DR ORG; Eukaryota; Metazoa; Arthropoda; Chelicerata; Arachnida; Acari; Parasitiformes; Ixodida; Ixodoidea; Ixodidae; Ixodinae; Ixodes; Ixodes scapularis; 
#=GS H3GXW5/207-398        AC H3GXW5
#=GS H3GXW5/207-398        OS Phytophthora ramorum
#=GS H3GXW5/207-398        DE Uncharacterized protein
#=GS H3GXW5/207-398        DR ORG; Eukaryota; Oomycetes; Peronosporales; Peronosporaceae; Phytophthora; Phytophthora ramorum; 
#=GS A0A1W2WB46/111-310    AC A0A1W2WB46
#=GS A0A1W2WB46/111-310    OS Ciona intestinalis
#=GS A0A1W2WB46/111-310    DE pseudouridylate synthase 7 homolog
#=GS A0A1W2WB46/111-310    DR ORG; Eukaryota; Metazoa; Chordata; Tunicata; Ascidiacea; Enterogona; Phlebobranchia; Cionidae; Ciona; Ciona intestinalis; 
#=GF SQ 6
D0MSB3/315-505                -----------------------------------------VRRVMVGGK----KRKDMDG----------RERNNGRAQWPKNRPDYLQFVLYKRNMETNSVMMQLAKAMNSNVS-AFTYAGTKDKRGITTQLCTVYRGSKERLETLNRAGRELDSFNFLVGNAEYVPERLNLGDLRGNRFSLAIRDLPDDETISDQQIHDAVRSWREHGFINYFGLQRFGTKAIATHEIGRAILQRDHKRVVDLL--
T1FXC4/42-66_108-268          -------------------------------------------QLDVLK-----RLSGSPKESTEKFIVQVKDDNSKNHFRD-----YCKFVLYKENKSTMEAIQYISTILRVNHS-LFSFAGTKDKRAITTQEVTAYGVHPRKLAGLNKCLK-----NVTLGDFRTSKTPLKLGDLKGNHFEIIIRNLDG----ANVCIENSLSMLKRNGFINYFGMQRFGATEVCNSRVGKCLIQSDWITAIELILK
F6PJM3/111-310                --------------------KTVSQLFPKLETKTVKNETTDEQEIKVMK-----FFSDSNK----------RKRSNKDRGFP-----YCKFVLYKENIATMDAVNLILKKLNLRHARCFQYAGNKDKRGVTVQEVTT-SISPERLVPVNQILS-----NIRVGNLVSCKTAKRLGDLNGNQFSIVIRNTLD---IEESDLKAAIKSFSQTGFINYFGMQRFGTNNVPTYEIGKSIISSRWEETVDLILS
B7QGJ0/60-288                 TEKVTIDVTSMSKEERRQVHGLVRKSFPDLDSVTKDQEEGAKKLILVEKKAGRATGADGLP----------VRKPRKRRYWPFGRGNYTTFALYKENADTMEAVNMIASVLRFKPS-CFAYAGTKDKRGKTCQLVSVYRVPARNLLGLNKRNW-----ALVIGNVSYEEKAIKLGDLLGNRFAIILRDVVG----SRSDIEEAVQSLSEKGFINYYGTQRFGTTSVSTQEIGRELLKGNYEAAVHLVLK
H3GXW5/207-398                ----------------------------------------RVRRVMVGGK----KRKDMDQ----------RGRNNARAPWPKNRPDYLQFVLHKRNMETNSIMMQLAKAMNTNVS-TFTYAGTKDKRGITTQLCTVYRGSKERLETLNRAGRELDSFNFLVGNATYVSERLNLGDLRGNRFSLAIRDLPGDATISDDQIHEAVRSWSEHGFINYFGLQRFGTKSVATHEIGRAILQRDHKRVVDLL--
A0A1W2WB46/111-310            --------------------KTVSQLFPKLETKTVKNETTDEQEIKVMK-----FFSDSNK----------RKRSNKDRGFP-----YCKFVLYKENIATMDAVNLILKKLNLRHARCFQYAGNKDKRGVTVQEVTT-SISPERLVPVNQILS-----NIRVGNLVSCKTAKRLGDLNGNQFSIVIRNTLD---IEESDLKAAIKSFSQTGFINYFGMQRFGTNNVPTYEIGKSIISSRWEETVDLILS
#=GC scorecons                000000000000000000000010101101100100010012335292510000224643300000000005354554424600101934969795933954553364436535360393799699996494935644445455934695333000006436973242344359999399595657964350003443364465464553999997959999743736467963664444434759531
#=GC scorecons_70             ______________________________________________*__________*_______________________*_____*__*****_*__*______*___*_______*_***_*****_*_*__*________*__**_________*___**_________****_**_*_*_**____________*__*__*____*******_*****__*_*_****__________*_*___
#=GC scorecons_80             ______________________________________________*________________________________________*__*_***_*__*__________________*_***_****__*_*___________*___*_____________**_________****_**_*___**_______________________*******_*****__*____**___________*_*___
#=GC scorecons_90             ______________________________________________*________________________________________*__*_*_*_*__*__________________*__**_****__*_*___________*___*_____________*__________****_**_*____*_______________________*****_*_****_________*_____________*___
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