# STOCKHOLM 1.0
#=GF ID 3.30.2350.10/FF/000026
#=GF DE RNA-binding protein S4
#=GF AC 3.30.2350.10/FF/000026
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 31.904
#=GS Q8P6L6/62-235      AC Q8P6L6
#=GS Q8P6L6/62-235      OS Xanthomonas campestris pv. campestris str. ATCC 33913
#=GS Q8P6L6/62-235      DE Pseudouridylate synthase
#=GS Q8P6L6/62-235      DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas; Xanthomonas campestris; 
#=GS Q9I4M5/62-235      AC Q9I4M5
#=GS Q9I4M5/62-235      OS Pseudomonas aeruginosa PAO1
#=GS Q9I4M5/62-235      DE Uncharacterized protein
#=GS Q9I4M5/62-235      DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas aeruginosa group; Pseudomonas aeruginosa; 
#=GS A0A1G5CW65/62-235  AC A0A1G5CW65
#=GS A0A1G5CW65/62-235  OS Acinetobacter baumannii
#=GS A0A1G5CW65/62-235  DE 16S rRNA pseudouridylate 516 synthase
#=GS A0A1G5CW65/62-235  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter; Acinetobacter calcoaceticus/baumannii complex; Acinetobacter baumannii; 
#=GS A0A1S1C4J6/62-235  AC A0A1S1C4J6
#=GS A0A1S1C4J6/62-235  OS Pseudomonas sp. HMSC059F05
#=GS A0A1S1C4J6/62-235  DE RNA-binding protein
#=GS A0A1S1C4J6/62-235  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas sp. HMSC059F05; 
#=GS A0A3S5E4Z1/62-235  AC A0A3S5E4Z1
#=GS A0A3S5E4Z1/62-235  OS Pseudomonas fluorescens
#=GS A0A3S5E4Z1/62-235  DE RNA-binding protein S4
#=GS A0A3S5E4Z1/62-235  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas fluorescens group; Pseudomonas fluorescens; 
#=GS A0A1F0IZ85/62-235  AC A0A1F0IZ85
#=GS A0A1F0IZ85/62-235  OS Pseudomonas sp. HMSC065H01
#=GS A0A1F0IZ85/62-235  DE RNA-binding protein
#=GS A0A1F0IZ85/62-235  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas sp. HMSC065H01; 
#=GS A0A2V2TDY1/62-235  AC A0A2V2TDY1
#=GS A0A2V2TDY1/62-235  OS Pseudomonas sp. RW410
#=GS A0A2V2TDY1/62-235  DE RNA-binding protein
#=GS A0A2V2TDY1/62-235  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas sp. RW410; 
#=GS A0A3M8R8B7/62-235  AC A0A3M8R8B7
#=GS A0A3M8R8B7/62-235  OS Pseudomonas aeruginosa
#=GS A0A3M8R8B7/62-235  DE RNA-binding protein
#=GS A0A3M8R8B7/62-235  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas aeruginosa group; Pseudomonas aeruginosa; 
#=GS W1MPQ0/62-235      AC W1MPQ0
#=GS W1MPQ0/62-235      OS Pseudomonas aeruginosa VRFPA03
#=GS W1MPQ0/62-235      DE RNA-binding protein S4
#=GS W1MPQ0/62-235      DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas aeruginosa group; Pseudomonas aeruginosa; 
#=GS V6AIV1/62-235      AC V6AIV1
#=GS V6AIV1/62-235      OS Pseudomonas aeruginosa MH27
#=GS V6AIV1/62-235      DE Uncharacterized protein
#=GS V6AIV1/62-235      DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas aeruginosa group; Pseudomonas aeruginosa; 
#=GS A0A069Q4Q2/62-235  AC A0A069Q4Q2
#=GS A0A069Q4Q2/62-235  OS Pseudomonas aeruginosa
#=GS A0A069Q4Q2/62-235  DE RNA-binding protein
#=GS A0A069Q4Q2/62-235  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas aeruginosa group; Pseudomonas aeruginosa; 
#=GS A0A0H2X5E9/62-235  AC A0A0H2X5E9
#=GS A0A0H2X5E9/62-235  OS Xanthomonas campestris pv. campestris str. 8004
#=GS A0A0H2X5E9/62-235  DE Pseudouridylate synthase
#=GS A0A0H2X5E9/62-235  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas; Xanthomonas campestris; 
#=GS B0RQ12/62-235      AC B0RQ12
#=GS B0RQ12/62-235      OS Xanthomonas campestris pv. campestris str. B100
#=GS B0RQ12/62-235      DE Ribosomal small subunit pseudouridylate synthase
#=GS B0RQ12/62-235      DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas; Xanthomonas campestris; 
#=GF SQ 13
Q8P6L6/62-235              EPATLLLNKPAGMSCEAAVALATPQSRSSLDQTEIRVLKRHFLRLSAPMPLDDEASGLLVLSQDGRILRRLTADAATIEQEYLVEVRGELRPYGMARLASGLVYQQRSLPACKVSWQNEERLRFAIKHVQPGQLRYMCNEVGLDVVTIRRLRVGRISLGKLALGEWRYLPTGER
Q9I4M5/62-235              EPATLLLHKPAGWRHDDFEGLLAAGRRWSDDPSPLRALKKHFARQRPTLALDSEASGLVVFSQQHGVLRKLVDDGARLEQEYLVEVAGDLAAGGLERLRHGLAYQGRRLSPCKVSWQNESHLRFALKDVLPGQLRFMCEREGLEVRSIRRLRIGALSLARLPLGEWRYLGLHER
A0A1G5CW65/62-235          EPATLLLHKPAGWRHDDFEGLLAAGRRWSDDPSPLRALKKHFARQRPTLALDSEASGLVVFSQQHGVLRKLVDDGARLEQEYLVEVAGDLAAGGLERLRHGLAYQGRRLSPCKVSWQNESHLRFALKDVLPGQLRFMCESEGLEVRSIRRLRIGALSLARLPLGEWRYLGLHER
A0A1S1C4J6/62-235          EPATLLLHKPAGWRHDDFEGLLAAGRRWSDDPSPLRALKKHFARQRPTLALDSEASGLVVFSQQHGVLRKLVDDGARLEQEYLVEVAGDLAAGGLERLRHGLAYQGRRLSPCKVSWQNESHLRFALKDVLPGQLRFMCESEGLEVRSIRRLRIGALSLARLPLGEWRYLGLHER
A0A3S5E4Z1/62-235          EPATLLLHKPAGWRHDDFEGLLAAGRRWSDDPSPLRALKKHFARQRPTLALDSEASGLVVFSQQHGVLRKLVDDGARLEQEYLVEVAGDLAAGGLERLRHGLAYQGRRLSPCKVSWQNESHLRFALKDVLPGQLRFMCESEGLEVRSIRRLRIGALSLARLPLGEWRYLGLHER
A0A1F0IZ85/62-235          EPATLLLHKPAGWRHDDFEGLLAAGRRWSDDPSPLRALKKHFARQRPTLALDSEASGLVVFSQQHGVLRKLVDDGARLEQEYLVEVAGDLAAGGLERLRHGLAYQGRRLSPCKVSWQNESHLRFALKDVLPGQLRFMCESEGLEVRSIRRLRIGALSLARLPLGEWRYLGLHER
A0A2V2TDY1/62-235          EPATLLLHKPAGWRHDDFEGLLAAGRRWSDDPSPLRALKKHFARQRPTLALDSEASGLVVFSQQHGVLRKLVDDGARLEQEYLVEVAGDLAAGGLERLRHGLAYQGRRLSPCKVSWQNESHLRFALKDVLPGQLRFMCESEGLEVRSIRRLRIGALSLARLPLGEWRYLGLHER
A0A3M8R8B7/62-235          EPATLLLHKPAGWRHDDFEGLLAAGRRWSDDPSPLRALKKHFARQRPTLALDSEASGLVVFSQQHGVLRKLVDDGARLEQEYLVEVAGDLAAGGLERLRHGLAYQGRRLSPCKVSWQNESHLRFALKDVLPGQLRFMCEREGLEVRSIRRLRIGALSLARLPLGEWRYLGLHER
W1MPQ0/62-235              EPATLLLHKPAGWRHDDFEGLLAAGRRWSDDPSPLRALKKHFARQRPTLALDSEASGLVVFSQQHGVLRKLVDDGARLEQEYLVEVAGDLAAGGLERLRHGLAYQGRRLSPCKVSWQNESHLRFALKDVLPGQLRFMCESEGLEVRSIRRLRIGALSLARLPLGEWRYLGLHER
V6AIV1/62-235              EPATLLLHKPAGWRHDDFEGLLAAGRRWSDDPSPLRALKKHFARQRPTLALDSEASGLVVFSQQHGVLRKLVDDGARLEQEYLVEVAGDLAAGGLERLRHGLAYQGRRLSPCKVSWQNESHLRFALKDVLPGQLRFMCESEGLEVRSIRRLRIGALSLARLPLGEWRYLGLHER
A0A069Q4Q2/62-235          EPATLLLHKPAGWRHDDFEGLLAAGRRWSDDPSPLRALKKHFARQRPTLALDSEASGLVVFSQQHGVLRKLVDDGARLEQEYLVEVAGDLAAGGLERLRHGLAYQGRRLSPCKVSWQNESHLRFALKDVLPGQLRFMCESEGLEVRSIRRLRIGALSLARLPLGEWRYLGLHER
A0A0H2X5E9/62-235          EPATLLLNKPAGMSCEAAVALATPQSRSSLDQTEIRVLKRHFLRLSAPMPLDDEASGLLVLSQDGRILRRLTADAATIEQEYLVEVRGELRPYGMARLASGLVYQQRSLPACKVSWQNEERLRFAIKHVQPGQLRYMCNEVGLDVVTIRRLRVGRISLGKLALGEWRYLPTGER
B0RQ12/62-235              KPATLLLNKPAGMSCEAAVALATPQSRSSLDQTEIRVLKRHFLRLSAPMPLDDEASGLLVLSQDGRILRRLTADAATIEQEYLVEVRGELRPYGMARLASGLLYQQRSLPACKVSWQNEERLRFAIKHVQPGQLRYMCNEVGLDVVTIRRLRVGRISLGKLALGEWRYLPTGER
#=GC scorecons             799999959999455654459565559494955469599699594555659959999969699545699695595956999999995969554965995599599595955999999995699996959499999799544996945999996956995695999999955499
#=GC scorecons_70          *******_****___*____*_*___*_*_*___**_*****_*____*_**_**********___*****__*_*_*********_***___**_**__**_**_*_*__********_*******_*_********___****__*******_***_**_*******___**
#=GC scorecons_80          *******_****________*_____*_*_*____*_**_**_*______**_*****_*_**____**_*__*_*__********_*_*___*__**__**_**_*_*__********__****_*_*_********___**_*__*****_*__**__*_*******___**
#=GC scorecons_90          _******_****________*_____*_*_*____*_**_**_*______**_*****_*_**____**_*__*_*__********_*_*___*__**__**_**_*_*__********__****_*_*_*****_**___**_*__*****_*__**__*_*******___**
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