# STOCKHOLM 1.0
#=GF ID 3.30.1480.10/FF/000006
#=GF DE Transcription termination/antitermination protein NusA
#=GF AC 3.30.1480.10/FF/000006
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 30.496
#=GS A0A0U1RJY2/6-137  AC A0A0U1RJY2
#=GS A0A0U1RJY2/6-137  OS Neisseria meningitidis Z2491
#=GS A0A0U1RJY2/6-137  DE Transcription termination/antitermination protein NusA
#=GS A0A0U1RJY2/6-137  DR ORG; Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Neisseriaceae; Neisseria; Neisseria meningitidis; 
#=GS A0A378UFK2/1-133  AC A0A378UFK2
#=GS A0A378UFK2/1-133  OS Bergeriella denitrificans
#=GS A0A378UFK2/1-133  DE Transcription termination/antitermination protein NusA
#=GS A0A378UFK2/1-133  DR ORG; Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Neisseriaceae; Bergeriella; Bergeriella denitrificans; 
#=GS C6M538/1-132      AC C6M538
#=GS C6M538/1-132      OS Neisseria sicca ATCC 29256
#=GS C6M538/1-132      DE Transcription termination/antitermination protein NusA
#=GS C6M538/1-132      DR ORG; Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Neisseriaceae; Neisseria; Neisseria sicca; 
#=GS A0A2J0Y8A1/1-133  AC A0A2J0Y8A1
#=GS A0A2J0Y8A1/1-133  OS Neisseria sp. N177_16
#=GS A0A2J0Y8A1/1-133  DE Transcription termination/antitermination protein NusA
#=GS A0A2J0Y8A1/1-133  DR ORG; Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Neisseriaceae; Neisseria; Neisseria sp. N177_16; 
#=GS A0A2H9WYL6/1-133  AC A0A2H9WYL6
#=GS A0A2H9WYL6/1-133  OS Neisseria sp. N95_16
#=GS A0A2H9WYL6/1-133  DE Transcription termination/antitermination protein NusA
#=GS A0A2H9WYL6/1-133  DR ORG; Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Neisseriaceae; Neisseria; Neisseria sp. N95_16; 
#=GS D2ZUW7/1-132      AC D2ZUW7
#=GS D2ZUW7/1-132      OS Neisseria mucosa ATCC 25996
#=GS D2ZUW7/1-132      DE Transcription termination/antitermination protein NusA
#=GS D2ZUW7/1-132      DR ORG; Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Neisseriaceae; Neisseria; Neisseria mucosa; 
#=GS A0A220RZG9/1-133  AC A0A220RZG9
#=GS A0A220RZG9/1-133  OS Neisseria sp. 10023
#=GS A0A220RZG9/1-133  DE Transcription termination/antitermination protein NusA
#=GS A0A220RZG9/1-133  DR ORG; Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Neisseriaceae; Neisseria; Neisseria sp. 10023; 
#=GS A0A0B5CNX5/1-133  AC A0A0B5CNX5
#=GS A0A0B5CNX5/1-133  OS Neisseria elongata subsp. glycolytica ATCC 29315
#=GS A0A0B5CNX5/1-133  DE Transcription termination/antitermination protein NusA
#=GS A0A0B5CNX5/1-133  DR ORG; Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Neisseriaceae; Neisseria; Neisseria elongata; Neisseria elongata subsp. glycolytica; 
#=GS A0A1X3CJI2/1-133  AC A0A1X3CJI2
#=GS A0A1X3CJI2/1-133  OS Neisseria animaloris
#=GS A0A1X3CJI2/1-133  DE Transcription termination/antitermination protein NusA
#=GS A0A1X3CJI2/1-133  DR ORG; Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Neisseriaceae; Neisseria; Neisseria animaloris; 
#=GS A0A3S5F9N4/1-133  AC A0A3S5F9N4
#=GS A0A3S5F9N4/1-133  OS Neisseria weaveri
#=GS A0A3S5F9N4/1-133  DE Transcription termination/antitermination protein NusA
#=GS A0A3S5F9N4/1-133  DR ORG; Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Neisseriaceae; Neisseria; Neisseria weaveri; 
#=GS Q5F798/1-132      AC Q5F798
#=GS Q5F798/1-132      OS Neisseria gonorrhoeae FA 1090
#=GS Q5F798/1-132      DE Transcription termination/antitermination protein NusA
#=GS Q5F798/1-132      DR ORG; Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Neisseriaceae; Neisseria; Neisseria gonorrhoeae; 
#=GS A0A0J0YUK9/1-133  AC A0A0J0YUK9
#=GS A0A0J0YUK9/1-133  OS Neisseria arctica
#=GS A0A0J0YUK9/1-133  DE Transcription termination/antitermination protein NusA
#=GS A0A0J0YUK9/1-133  DR ORG; Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Neisseriaceae; Neisseria; Neisseria arctica; 
#=GS D7N1M5/1-133      AC D7N1M5
#=GS D7N1M5/1-133      OS Neisseria sp. oral taxon 014 str. F0314
#=GS D7N1M5/1-133      DE Transcription termination/antitermination protein NusA
#=GS D7N1M5/1-133      DR ORG; Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Neisseriaceae; Neisseria; Neisseria sp. oral taxon 014; 
#=GS E4ZC01/1-131      AC E4ZC01
#=GS E4ZC01/1-131      OS Neisseria lactamica 020-06
#=GS E4ZC01/1-131      DE Transcription termination/antitermination protein NusA
#=GS E4ZC01/1-131      DR ORG; Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Neisseriaceae; Neisseria; Neisseria lactamica; 
#=GS E5UH95/1-127      AC E5UH95
#=GS E5UH95/1-127      OS Neisseria mucosa C102
#=GS E5UH95/1-127      DE Transcription termination/antitermination protein NusA
#=GS E5UH95/1-127      DR ORG; Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Neisseriaceae; Neisseria; Neisseria mucosa; 
#=GS Q9JYD3/1-132      AC Q9JYD3
#=GS Q9JYD3/1-132      OS Neisseria meningitidis MC58
#=GS Q9JYD3/1-132      DE Transcription termination/antitermination protein NusA
#=GS Q9JYD3/1-132      DR ORG; Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Neisseriaceae; Neisseria; Neisseria meningitidis; 
#=GS A0A0Q0WUG6/1-132  AC A0A0Q0WUG6
#=GS A0A0Q0WUG6/1-132  OS Neisseria meningitidis
#=GS A0A0Q0WUG6/1-132  DE Transcription termination/antitermination protein NusA
#=GS A0A0Q0WUG6/1-132  DR ORG; Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Neisseriaceae; Neisseria; Neisseria meningitidis; 
#=GS A0A125WBP5/1-132  AC A0A125WBP5
#=GS A0A125WBP5/1-132  OS Neisseria meningitidis NM2795
#=GS A0A125WBP5/1-132  DE Transcription termination/antitermination protein NusA
#=GS A0A125WBP5/1-132  DR ORG; Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Neisseriaceae; Neisseria; Neisseria meningitidis; 
#=GS A0A1D3G7A0/1-132  AC A0A1D3G7A0
#=GS A0A1D3G7A0/1-132  OS Neisseria gonorrhoeae
#=GS A0A1D3G7A0/1-132  DE Transcription termination/antitermination protein NusA
#=GS A0A1D3G7A0/1-132  DR ORG; Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Neisseriaceae; Neisseria; Neisseria gonorrhoeae; 
#=GF SQ 19
A0A0U1RJY2/6-137          MSREMLQLAEALASEKNVDAEVVFQALEFALSTAAKKKADREHMDVRVQINRDTGEYQTFRRWLIVADEDYTYPDVEKTIEEIQEEIPGTTIQIGEYYEEQLPNEGFGRQAAQTAKQIILQRIRDAEREQNL-
A0A378UFK2/1-133          MSREMLQLAEALASEKNVEAEVVFQALEFALSTAAKKKADREHMDVRVEIDRDTGEYRTFRRWLIVADEDYTYPDVEKTIEEIQEEIPGTTIQIGEYYEEQLENEGFGRQAAQTAKQIILQRIRDAEREQILS
C6M538/1-132              MSREMLQLAEALASEKNVEAEVVFQALEFALSTAAKKKADREHMDVRVEIDRDTGEYHTYRRWLIVADEDYTYPDLEKTIEEIQEEIPGTDIQIGDYYEETLPNEGFGRQAAQTAKQIILQRIRDAEREQNL-
A0A2J0Y8A1/1-133          MSREMLQLAEALASEKNVEAEVVFQALEFALSTAAKKKANREHMDVRVEIDRDTGEYRTFRRWLIVADEDYTYPDVEKTIEEIQEEIPGTDIQIGEYYEEQLENEGFGRQAAQTAKQIILQRIRDAEREQILN
A0A2H9WYL6/1-133          MSREMLQLAEALASEKNVEAEVVFQALEFALSTAAKKKANREHMDVRVEIDRDTGEYRTFRRWLIVADEDYTYPDVEKTIEEIQEEIPGTDIQIGEYYEEQLENEGFGRQAAQTAKQIILQRIRDAEREQILN
D2ZUW7/1-132              MSREMLQLAEALASEKNVEAEVVFQALEFALSTAAKKKADREHMDVRVEIDRDTGEYHTFRRWLIVADEDYTYPDLEKTIEEIQEEIPGTDIQIGDYYEETLPNEGFGRQAAQTAKQIILQRIRDAEREQNL-
A0A220RZG9/1-133          MSREMLQLAEALASEKNVEAGVVFDALEEALSIAARKKASREHMDVRVEIDRETGGYRTFRRWLIVADEDYTYPDVEKTIEEIQEEIPGTDIQIGEYYEEQLENEGFGRQAAQTAKQIILQRIRDAEREQILG
A0A0B5CNX5/1-133          MSREMLQLAEALASEKNVDTDVVFDALEFALSTAAKKKAGREHMDARVEIDRNTGEHRTFRRWLIVADEDYTYPDVEKTIEEIQEEIPGTTIQIGEYYEEQIENEGFGRQAAMTAKQIILQRIRDAEREKVLN
A0A1X3CJI2/1-133          MSREMLQLAEALASEKNVDPEVVFSALEFALSTAAKKKANREHMDVRVEIDRHTGEYKTFRRWLIVADEDYTYPDVEKTIEEIQEEIPDTTLQIGEYHEELLENEGFGRQAAQTAKQIILQRIRDAEREQILE
A0A3S5F9N4/1-133          MSREMLLLAEALASEKNVNTEVVFEALEFALSTAAKKKADREHMDVRVEIDRNTGEYRTFRRWLIVADEDYTYPDVEKTIEEIQEEIPGTTIQIGEYYEEQLENEGFGRQAAQTAKQIILQRIRDAEREQILG
Q5F798/1-132              MSREMLQLAEALASEKNVDAEVVFQALEFALSTAAKKKADREHMDVRVQINRDTGEYQTFRRWLIVADEDYTYPDVEKTIEEIQEEIPDTTIQIGEYYEEQLPNEGFGRQAAQTAKQIILQRIRDAEREQNL-
A0A0J0YUK9/1-133          MSREMLQLAEALASEKNVDTEVVFKALEFALSTAAKKKADREHMDVRVEINRDNGEYRTFRRWLIVADEDYTYPDVEKTIEEIQEEIPGTTIQIGEYYEEQLENEGFGRQAAQTAKQIILQRIRDAEREQILE
D7N1M5/1-133              MSREMLQLAEALASEKNVDTEVVFQALEFALSTAAKKKANREHMDVRVEIDRDTGEYRTFRRWLIVADEDYTYPDVEKTIEEIQEEIPGTEIQIGEYYEEQLENEGFGRQAAQTAKQIILQRIRDAEREQILN
E4ZC01/1-131              MSREMLQLAEALASEKNVDAEVVFQALEFALSTAAKKKAGREHMDVRVQIDRDTGEYQTFRRWLIVADEDYTYPDVEKTIEEIQEEIPGTAIQIGEYYEEQLPNEGFGRQAAQTAKQIILQRIRDAEREQN--
E5UH95/1-127              ----MLQLAEALASEKNVETEVVFKALEFALSTAAKKKADREHMDVRVEIDRDTGEYQTFRRWLIVADEDYTYPDVEKTIEEIQEEIPGTTIQIGEYYEEQLPNEGFGRQAAQTAKQIILQRIRDAEREQN--
Q9JYD3/1-132              MSREMLQLAEALASEKNVDAEVVFQALEFALSTAAKKKADREHMDVRVQINRDTGEYQTFRRWLIVADEDYTYPDVEKTIEEIQEEIPGTTIQIGEYYEEQLPNEGFGRQAAQTAKQIILQRIRDAEREQNL-
A0A0Q0WUG6/1-132          MSREMLQLAEALASEKNVDAEVVFQALEFALSTAAKKKADREHMDVRVQINRDTGEYQTFRRWLIVADEDYTYPDVEKTIEEIQEEIPGTTIQIGEYYEEQLPNEGFGRQAAQTAKQIILQRIRDAEREQNL-
A0A125WBP5/1-132          MSREMLQLAEALASEKNVDAEVVFQALEFALSTAAKKKADREHMDVRVQINRDTGEYQTFRRWLIVADEDYTYPDVEKTIEEIQEEIPGTTIQIGEYYEEQLPNEGFGRQAAQTAKQIILQRIRDAEREQNL-
A0A1D3G7A0/1-132          MSREMLQLAEALASEKNVDAEVVFQALEFALSTAAKKKADREHMDVRVQINRDTGEYQTFRRWLIVADEDYTYPDVEKTIEEIQEEIPDTTIQIGEYYEEQLPNEGFGRQAAQTAKQIILQRIRDAEREQNL-
#=GC scorecons            7777998999999999996679995999799989989995999998996969689885989999999999999998999999999999795899989899685999999999799999999999999998461
#=GC scorecons_70         *******************_****_**************_*****************_********************************_***********_***************************_*_
#=GC scorecons_80         ******************__****_**************_********_*_*_****_********************************_*********_*_***************************___
#=GC scorecons_90         ____**************___***_***_**********_********_*_*_****_*****************_************_*_*********_*_*********_*****************___
//