# STOCKHOLM 1.0
#=GF ID 3.30.1360.10/FF/000014
#=GF DE DNA-directed RNA polymerase II subunit RPB3
#=GF AC 3.30.1360.10/FF/000014
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 9.772
#=GS Q8I2S6/13-47_176-298      AC Q8I2S6
#=GS Q8I2S6/13-47_176-298      OS Plasmodium falciparum 3D7
#=GS Q8I2S6/13-47_176-298      DE DNA-directed RNA polymerase II subunit RPB3,putative
#=GS Q8I2S6/13-47_176-298      DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS A0A2P9BEJ1/13-47_176-298  AC A0A2P9BEJ1
#=GS A0A2P9BEJ1/13-47_176-298  OS Plasmodium sp. gorilla clade G1
#=GS A0A2P9BEJ1/13-47_176-298  DE DNA-directed RNA polymerase II subunit RPB3, putative
#=GS A0A2P9BEJ1/13-47_176-298  DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium sp. gorilla clade G1; 
#=GS A0A151LLY2/13-47_176-295  AC A0A151LLY2
#=GS A0A151LLY2/13-47_176-295  OS Plasmodium gaboni
#=GS A0A151LLY2/13-47_176-295  DE Putative DNA-directed RNA polymerase II
#=GS A0A151LLY2/13-47_176-295  DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium gaboni; 
#=GS A0A151LI36/13-47_176-298  AC A0A151LI36
#=GS A0A151LI36/13-47_176-298  OS Plasmodium reichenowi
#=GS A0A151LI36/13-47_176-298  DE DNA-directed RNA polymerase II, putative
#=GS A0A151LI36/13-47_176-298  DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium reichenowi; 
#=GS W7JXY0/13-47_176-298      AC W7JXY0
#=GS W7JXY0/13-47_176-298      OS Plasmodium falciparum NF54
#=GS W7JXY0/13-47_176-298      DE DNA-directed RNA polymerase II subunit RPB3
#=GS W7JXY0/13-47_176-298      DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS A0A024W747/13-47_176-298  AC A0A024W747
#=GS A0A024W747/13-47_176-298  OS Plasmodium falciparum Tanzania (2000708)
#=GS A0A024W747/13-47_176-298  DE Uncharacterized protein
#=GS A0A024W747/13-47_176-298  DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS A0A024V6J5/13-47_176-298  AC A0A024V6J5
#=GS A0A024V6J5/13-47_176-298  OS Plasmodium falciparum Vietnam Oak-Knoll (FVO)
#=GS A0A024V6J5/13-47_176-298  DE Uncharacterized protein
#=GS A0A024V6J5/13-47_176-298  DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS A0A0L7M1I4/13-47_176-298  AC A0A0L7M1I4
#=GS A0A0L7M1I4/13-47_176-298  OS Plasmodium falciparum Dd2
#=GS A0A0L7M1I4/13-47_176-298  DE Uncharacterized protein
#=GS A0A0L7M1I4/13-47_176-298  DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS A0A024X8Z1/13-47_176-298  AC A0A024X8Z1
#=GS A0A024X8Z1/13-47_176-298  OS Plasmodium falciparum CAMP/Malaysia
#=GS A0A024X8Z1/13-47_176-298  DE Uncharacterized protein
#=GS A0A024X8Z1/13-47_176-298  DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS A0A0L0CYB1/13-47_176-298  AC A0A0L0CYB1
#=GS A0A0L0CYB1/13-47_176-298  OS Plasmodium falciparum RAJ116
#=GS A0A0L0CYB1/13-47_176-298  DE DNA-directed RNA polymerase II
#=GS A0A0L0CYB1/13-47_176-298  DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS W4J0L4/13-47_176-298      AC W4J0L4
#=GS W4J0L4/13-47_176-298      OS Plasmodium falciparum Palo Alto/Uganda
#=GS W4J0L4/13-47_176-298      DE Uncharacterized protein
#=GS W4J0L4/13-47_176-298      DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS W7JP21/13-47_176-298      AC W7JP21
#=GS W7JP21/13-47_176-298      OS Plasmodium falciparum UGT5.1
#=GS W7JP21/13-47_176-298      DE Uncharacterized protein
#=GS W7JP21/13-47_176-298      DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS A0A024WSG7/13-47_176-298  AC A0A024WSG7
#=GS A0A024WSG7/13-47_176-298  OS Plasmodium falciparum MaliPS096_E11
#=GS A0A024WSG7/13-47_176-298  DE Uncharacterized protein
#=GS A0A024WSG7/13-47_176-298  DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS W7F2H9/13-47_176-298      AC W7F2H9
#=GS W7F2H9/13-47_176-298      OS Plasmodium falciparum 7G8
#=GS W7F2H9/13-47_176-298      DE Uncharacterized protein
#=GS W7F2H9/13-47_176-298      DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS A0A0L7K924/13-47_176-298  AC A0A0L7K924
#=GS A0A0L7K924/13-47_176-298  OS Plasmodium falciparum HB3
#=GS A0A0L7K924/13-47_176-298  DE Uncharacterized protein
#=GS A0A0L7K924/13-47_176-298  DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS A0A0L1I4H3/13-47_176-298  AC A0A0L1I4H3
#=GS A0A0L1I4H3/13-47_176-298  OS Plasmodium falciparum IGH-CR14
#=GS A0A0L1I4H3/13-47_176-298  DE DNA-directed RNA polymerase II
#=GS A0A0L1I4H3/13-47_176-298  DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS W4IHL1/13-47_176-298      AC W4IHL1
#=GS W4IHL1/13-47_176-298      OS Plasmodium falciparum NF135/5.C10
#=GS W4IHL1/13-47_176-298      DE Uncharacterized protein
#=GS W4IHL1/13-47_176-298      DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS A0A024VG55/13-47_176-298  AC A0A024VG55
#=GS A0A024VG55/13-47_176-298  OS Plasmodium falciparum FCH/4
#=GS A0A024VG55/13-47_176-298  DE Uncharacterized protein
#=GS A0A024VG55/13-47_176-298  DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS W7FZK9/13-47_176-298      AC W7FZK9
#=GS W7FZK9/13-47_176-298      OS Plasmodium falciparum Santa Lucia
#=GS W7FZK9/13-47_176-298      DE Uncharacterized protein
#=GS W7FZK9/13-47_176-298      DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS A0A060RXG7/13-47_176-297  AC A0A060RXG7
#=GS A0A060RXG7/13-47_176-297  OS Plasmodium reichenowi
#=GS A0A060RXG7/13-47_176-297  DE DNA-directed RNA polymerase II, putative
#=GS A0A060RXG7/13-47_176-297  DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium reichenowi; 
#=GF SQ 20
Q8I2S6/13-47_176-298              INITKLTKDELYFTLYNSNSGIANALRRIMLSEIPKWIPANVSYRIDHKVLIKHNLIDKLSNEHKLLLANNLNKDCYILNKDTHDDDNNNNNNIQLKLKENMSVVMAESSIDLLSELGYKDIIKIVYDETMFHFHVESVGSIPPEQIVQMAIDILENK
A0A2P9BEJ1/13-47_176-298          INITKLTKDELDFTLYNSNSGIANALRRIMLSEIPKWIPANVSYRIDHKVLIKHNLIDKLSNEHKLLLANNLNKDCYILNKDTHDDDNNNNNNIQLKLKENMSVVMAESSIDLLSELGYKDIIKIVYDETMFHFHVESVGSIPPEQIVQMAIDILENK
A0A151LLY2/13-47_176-295          INITKLTKDELIFTLYNSNSGIANALRRIMLSEIPKWVPANVSYRIDHKVLIKHNLIDKLSNEHKLLLANNLNKDCYTLNKNTHD---NNNNNIQLKLKEDMSVVMAESAIDLLSELGFKDIIKIVYDESIFHFHVESVGSIPPEQIVQMAIDILENK
A0A151LI36/13-47_176-298          INITKLTKDELDFTLYNSNSGIANALRRIMLSEIPKWIPANVSYRIDHKVLIKHNLIDKLSNEHKLLLANNLNTDCYILNKDTHDDDNNNNNNIQLKLKENMSVVMAESSIDLLSELGYKDIIKIVYDETMFHFHVESVGSIPPEQIVQMAIDILENK
W7JXY0/13-47_176-298              INITKLTKDELYFTLYNSNSGIANALRRIMLSEIPKWIPANVSYRIDHKVLIKHNLIDKLSNEHKLLLANNLNKDCYILNKDTHDDDNNNNNNIQLKLKENMSVVMAESSIDLLSELGYKDIIKIVYDETMFHFHVESVGSIPPEQIVQMAIDILENK
A0A024W747/13-47_176-298          INITKLTKDELDFTLYNSNSGIANALRRIMLSEIPKWIPANVSYRIDHKVLIKHNLIDKLSNEHKLLLANNLNKDCYILNKDTHDDDNNNNNNIQLKLKENMSVVMAESSIDLLSELGYKDIIKIVYDETMFHFHVESVGSIPPEQIVQMAIDILENK
A0A024V6J5/13-47_176-298          INITKLTKDELDFTLYNSNSGIANALRRIMLSEIPKWIPANVSYRIDHKVLIKHNLIDKLSNEHKLLLANNLNKDCYILNKDTHDDDNNNNNNIQLKLKENMSVVMAESSIDLLSELGYKDIIKIVYDETMFHFHVESVGSIPPEQIVQMAIDILENK
A0A0L7M1I4/13-47_176-298          INITKLTKDELDFTLYNSNSGIANALRRIMLSEIPKWIPANVSYRIDHKVLIKHNLIDKLSNEHKLLLANNLNKDCYILNKDTHDDDNNNNNNIQLKLKENMSVVMAESSIDLLSELGYKDIIKIVYDETMFHFHVESVGSIPPEQIVQMAIDILENK
A0A024X8Z1/13-47_176-298          INITKLTKDELDFTLYNSNSGIANALRRIMLSEIPKWIPANVSYRIDHKVLIKHNLIDKLSNEHKLLLANNLNKDCYILNKDTHDDDNNNNNNIQLKLKENMSVVMAESSIDLLSELGYKDIIKIVYDETMFHFHVESVGSIPPEQIVQMAIDILENK
A0A0L0CYB1/13-47_176-298          INITKLTKDELDFTLYNSNSGIANALRRIMLSEIPKWIPANVSYRIDHKVLIKHNLIDKLSNEHKLLLANNLNKDCYILNKDTHDDDNNNNNNIQLKLKENMSVVMAESSIDLLSELGYKDIIKIVYDETMFHFHVESVGSIPPEQIVQMAIDILENK
W4J0L4/13-47_176-298              INITKLTKDELDFTLYNSNSGIANALRRIMLSEIPKWIPANVSYRIDHKVLIKHNLIDKLSNEHKLLLANNLNKDCYILNKDTHDDDNNNNNNIQLKLKENMSVVMAESSIDLLSELGYKDIIKIVYDETMFHFHVESVGSIPPEQIVQMAIDILENK
W7JP21/13-47_176-298              INITKLTKDELDFTLYNSNSGIANALRRIMLSEIPKWIPANVSYRIDHKVLIKHNLIDKLSNEHKLLLANNLNKDCYILNKDTHDDDNNNNNNIQLKLKENMSVVMAESSIDLLSELGYKDIIKIVYDETMFHFHVESVGSIPPEQIVQMAIDILENK
A0A024WSG7/13-47_176-298          INITKLTKDELDFTLYNSNSGIANALRRIMLSEIPKWIPANVSYRIDHKVLIKHNLIDKLSNEHKLLLANNLNKDCYILNKDTHDDDNNNNNNIQLKLKENMSVVMAESSIDLLSELGYKDIIKIVYDETMFHFHVESVGSIPPEQIVQMAIDILENK
W7F2H9/13-47_176-298              INITKLTKDELDFTLYNSNSGIANALRRIMLSEIPKWIPANVSYRIDHKVLIKHNLIDKLSNEHKLLLANNLNKDCYILNKDTHDDDNNNNNNIQLKLKENMSVVMAESSIDLLSELGYKDIIKIVYDETMFHFHVESVGSIPPEQIVQMAIDILENK
A0A0L7K924/13-47_176-298          INITKLTKDELDFTLYNSNSGIANALRRIMLSEIPKWIPANVSYRIDHKVLIKHNLIDKLSNEHKLLLANNLNKDCYILNKDTHDDDNNNNNNIQLKLKENMSVVMAESSIDLLSELGYKDIIKIVYDETMFHFHVESVGSIPPEQIVQMAIDILENK
A0A0L1I4H3/13-47_176-298          INITKLTKDELDFTLYNSNSGIANALRRIMLSEIPKWIPANVSYRIDHKVLIKHNLIDKLSNEHKLLLANNLNKDCYILNKDTHDDDNNNNNNIQLKLKENMSVVMAESSIDLLSELGYKDIIKIVYDETMFHFHVESVGSIPPEQIVQMAIDILENK
W4IHL1/13-47_176-298              INITKLTKDELDFTLYNSNSGIANALRRIMLSEIPKWIPANVSYRIDHKVLIKHNLIDKLSNEHKLLLANNLNKDCYILNKDTHDDDNNNNNNIQLKLKENMSVVMAESSIDLLSELGYKDIIKIVYDETMFHFHVESVGSIPPEQIVQMAIDILENK
A0A024VG55/13-47_176-298          INITKLTKDELDFTLYNSNSGIANALRRIMLSEIPKWIPANVSYRIDHKVLIKHNLIDKLSNEHKLLLANNLNKDCYILNKDTHDDDNNNNNNIQLKLKENMSVVMAESSIDLLSELGYKDIIKIVYDETMFHFHVESVGSIPPEQIVQMAIDILENK
W7FZK9/13-47_176-298              INITKLTKDELDFTLYNSNSGIANALRRIMLSEIPKWIPANVSYRIDHKVLIKHNLIDKLSNEHKLLLANNLNKDCYILNKDTHDDDNNNNNNIQLKLKENMSVVMAESSIDLLSELGYKDIIKIVYDETMFHFHVESVGSIPPEQIVQMAIDILENK
A0A060RXG7/13-47_176-297          INITKLTKDELDFTLYNSNSGIANALRRIMLSEIPKWIPANVSYRIDHKVLIKHNLIDKLSNEHKLLLANNLNNDCYILNKDTHDDD-NHNNNIQLKLKENMSVVMAESSIDLLSELGYKDIIKIVYDETMFHFHVESVGSIPPEQIVQMAIDILENK
#=GC scorecons                    99999999999499999999999999999999999997999999999999999999999999999999999997999699969994439799999999996999999996999999997999999999966999999999999999999999999999
#=GC scorecons_70                 ***********_*****************************************************************_*******___*********************_*******************_****************************
#=GC scorecons_80                 ***********_*************************_***********************************_***_***_***___************_********_*******************__***************************
#=GC scorecons_90                 ***********_*************************_***********************************_***_***_***___*_**********_********_********_**********__***************************
//