# STOCKHOLM 1.0
#=GF ID 3.10.20.90/FF/000296
#=GF DE Ubiquitin-like protein-NEDD8-like protein RUB3
#=GF AC 3.10.20.90/FF/000296
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 56.794
#=GS A0A0D0VEX6/1-78  AC A0A0D0VEX6
#=GS A0A0D0VEX6/1-78  OS Cryptococcus gattii VGII Ram5
#=GS A0A0D0VEX6/1-78  DE Unplaced genomic scaffold supercont1.1, whole genome shotgun sequence
#=GS A0A0D0VEX6/1-78  DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Tremellomycetes; Tremellales; Cryptococcaceae; Cryptococcus; Cryptococcus gattii species complex; Cryptococcus gattii VGII; 
#=GS B5RSL8/1-77      AC B5RSL8
#=GS B5RSL8/1-77      OS Yarrowia lipolytica CLIB122
#=GS B5RSL8/1-77      DE YALI0F18403p
#=GS B5RSL8/1-77      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Dipodascaceae; Yarrowia; Yarrowia lipolytica; 
#=GS A7EX06/58-143    AC A7EX06
#=GS A7EX06/58-143    OS Sclerotinia sclerotiorum 1980 UF-70
#=GS A7EX06/58-143    DE Uncharacterized protein
#=GS A7EX06/58-143    DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Leotiomycetes; Helotiales; Sclerotiniaceae; Sclerotinia; Sclerotinia sclerotiorum; 
#=GS A0A1B9IDF2/1-77  AC A0A1B9IDF2
#=GS A0A1B9IDF2/1-77  OS Kwoniella pini CBS 10737
#=GS A0A1B9IDF2/1-77  DE Ubiquitin-like protein-NEDD8-like protein RUB3
#=GS A0A1B9IDF2/1-77  DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Tremellomycetes; Tremellales; Cryptococcaceae; Kwoniella; Kwoniella pini; 
#=GS A0A1E3K2E5/1-78  AC A0A1E3K2E5
#=GS A0A1E3K2E5/1-78  OS Tsuchiyaea wingfieldii CBS 7118
#=GS A0A1E3K2E5/1-78  DE Ubiquitin-like protein Nedd8
#=GS A0A1E3K2E5/1-78  DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Tremellomycetes; Tremellales; Cryptococcaceae; Tsuchiyaea; Tsuchiyaea wingfieldii; 
#=GS A0A1A6AGN6/1-78  AC A0A1A6AGN6
#=GS A0A1A6AGN6/1-78  OS Kwoniella dejecticola CBS 10117
#=GS A0A1A6AGN6/1-78  DE Ubiquitin-like protein-NEDD8-like protein RUB3
#=GS A0A1A6AGN6/1-78  DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Tremellomycetes; Tremellales; Cryptococcaceae; Kwoniella; Kwoniella dejecticola; 
#=GS A0A225ZKN2/1-78  AC A0A225ZKN2
#=GS A0A225ZKN2/1-78  OS Cryptococcus neoformans var. grubii c45
#=GS A0A225ZKN2/1-78  DE Ubiquitin-like protein Nedd8
#=GS A0A225ZKN2/1-78  DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Tremellomycetes; Tremellales; Cryptococcaceae; Cryptococcus; Cryptococcus neoformans species complex; Cryptococcus neoformans; Cryptococcus neoformans var. grubii; 
#=GS A0A1B9IIT2/1-77  AC A0A1B9IIT2
#=GS A0A1B9IIT2/1-77  OS Kwoniella mangroviensis CBS 10435
#=GS A0A1B9IIT2/1-77  DE Ubiquitin-like protein-NEDD8-like protein RUB3
#=GS A0A1B9IIT2/1-77  DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Tremellomycetes; Tremellales; Cryptococcaceae; Kwoniella; Kwoniella mangrovensis; 
#=GS A0A1E3KFH1/1-78  AC A0A1E3KFH1
#=GS A0A1E3KFH1/1-78  OS Cryptococcus amylolentus CBS 6273
#=GS A0A1E3KFH1/1-78  DE Uncharacterized protein
#=GS A0A1E3KFH1/1-78  DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Tremellomycetes; Tremellales; Cryptococcaceae; Cryptococcus; Cryptococcus amylolentus; 
#=GS A0A1B9GQF9/1-80  AC A0A1B9GQF9
#=GS A0A1B9GQF9/1-80  OS Kwoniella heveanensis BCC8398
#=GS A0A1B9GQF9/1-80  DE Ubiquitin-like protein Nedd8
#=GS A0A1B9GQF9/1-80  DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Tremellomycetes; Tremellales; Cryptococcaceae; Kwoniella; Kwoniella heveanensis; 
#=GS A0A1B9GAI6/1-77  AC A0A1B9GAI6
#=GS A0A1B9GAI6/1-77  OS Kwoniella bestiolae CBS 10118
#=GS A0A1B9GAI6/1-77  DE Ubiquitin-like protein-NEDD8-like protein RUB3
#=GS A0A1B9GAI6/1-77  DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Tremellomycetes; Tremellales; Cryptococcaceae; Kwoniella; Kwoniella bestiolae; 
#=GS Q5KK31/1-81      AC Q5KK31
#=GS Q5KK31/1-81      OS Cryptococcus neoformans var. neoformans JEC21
#=GS Q5KK31/1-81      DE Ribosomal chaperone, putative
#=GS Q5KK31/1-81      DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Tremellomycetes; Tremellales; Cryptococcaceae; Cryptococcus; Cryptococcus neoformans species complex; Cryptococcus neoformans; Cryptococcus neoformans var. neoformans; 
#=GS A0A095CBA7/1-78  AC A0A095CBA7
#=GS A0A095CBA7/1-78  OS Cryptococcus gattii VGII R265
#=GS A0A095CBA7/1-78  DE Ubiquitin-like protein Nedd8
#=GS A0A095CBA7/1-78  DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Tremellomycetes; Tremellales; Cryptococcaceae; Cryptococcus; Cryptococcus gattii species complex; Cryptococcus gattii VGII; 
#=GS A0A1E3I922/1-78  AC A0A1E3I922
#=GS A0A1E3I922/1-78  OS Cryptococcus amylolentus CBS 6039
#=GS A0A1E3I922/1-78  DE Uncharacterized protein
#=GS A0A1E3I922/1-78  DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Tremellomycetes; Tremellales; Cryptococcaceae; Cryptococcus; Cryptococcus amylolentus; 
#=GS J9VQ81/1-78      AC J9VQ81
#=GS J9VQ81/1-78      OS Cryptococcus neoformans var. grubii H99
#=GS J9VQ81/1-78      DE Ubiquitin-like protein Nedd8
#=GS J9VQ81/1-78      DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Tremellomycetes; Tremellales; Cryptococcaceae; Cryptococcus; Cryptococcus neoformans species complex; Cryptococcus neoformans; Cryptococcus neoformans var. grubii; 
#=GS A0A226BL06/1-78  AC A0A226BL06
#=GS A0A226BL06/1-78  OS Cryptococcus neoformans var. grubii Bt85
#=GS A0A226BL06/1-78  DE Ubiquitin-like protein Nedd8
#=GS A0A226BL06/1-78  DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Tremellomycetes; Tremellales; Cryptococcaceae; Cryptococcus; Cryptococcus neoformans species complex; Cryptococcus neoformans; Cryptococcus neoformans var. grubii; 
#=GS A0A371C0W1/1-77  AC A0A371C0W1
#=GS A0A371C0W1/1-77  OS Yarrowia lipolytica
#=GS A0A371C0W1/1-77  DE Ubiquitin-related domain-containing protein
#=GS A0A371C0W1/1-77  DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Dipodascaceae; Yarrowia; Yarrowia lipolytica; 
#=GF SQ 17
A0A0D0VEX6/1-78          --------MIVKVKTLTGKEVDIDVQPDMTISKVKERVEEKAGIPPVQQRLIFGGKAMGDDKTIQDYKIQAGAAIHLVLALRGGRA---
B5RSL8/1-77              --------MKIKIKTLIGKEIEMDVEPEDQISVLKEKIEELEGIPPAQQRLVFTGKQLQDEKTIAENKIEAGASLHLVLALRGGN----
A7EX06/58-143            NRSFTTATMLIKVRTLTGKEIELDVESDNKIERVKEKVEEKEGIPPVQQRLIYGGKQMADDKLVKDYELEPGATLHLVLALRGGSL---
A0A1B9IDF2/1-77          --------MIVKVKTLTGKEVDIDVQPDMTINKVKERVEEKAGIPPVQQRLIFGGKAMADDKAIQDYKINAGAVIHLVLALRGGR----
A0A1E3K2E5/1-78          --------MIVKVKTLTGKEVDIDVQPDMIISKVKDRVEEKAGIPPVQQRLIFGGKAMNDEKAIQDYKIQAGAVIHLVLALRGGRA---
A0A1A6AGN6/1-78          --------MIVKVKTLTGKEVDIDVQPDMTINKVKERVEEKAGIPPVQQRLIFGGKAMADDKAIQDYKINAGAVIHLVLALRGGVR---
A0A225ZKN2/1-78          --------MIVKVKTLTGKEVDIDVQPDMTISKVKERVEEKAGIPPVQQRLIFGGKAMGDDKTIQDYKIQAGAAIHLVLALRGGRA---
A0A1B9IIT2/1-77          --------MIVKVKTLTGKEVDIDVQPDMTINKVKERVEEKAGIPPVQQRLIFGGKAMADDKAIQDYKINAGAVIHLVLALRGGR----
A0A1E3KFH1/1-78          --------MIVKVKTLTGKEVDIDVQPDMIISKVKDRVEEKAGIPPVQQRLIFGGKAMNDEKAIQDYKIQAGAVIHLVLALRGGRA---
A0A1B9GQF9/1-80          --------MIVKVKTLTGKEVDIDVQPDMTISKVKERVEEKAGIPPVQQRLIFGGKAMGDEKTIQDYKIQAGAVIHLVLALRGGDS-SS
A0A1B9GAI6/1-77          --------MIVKVKTLTGKEVDIDVQPDMTINKVKERVEEKAGIPPVQQRLIFGGKAMADDKAISDYKINAGAVIHLVLALRGGR----
Q5KK31/1-81              --------MIVKVKTLTGKEVDIDVQPDMTISKVKERVEEKAGIPPVQQRLIFGGKAMGDDKTIQDYKIQAGAAIHLVLALRGGRTLNG
A0A095CBA7/1-78          --------MIVKVKTLTGKEVDIDVQPDMTISKVKERVEEKAGIPPVQQRLIFGGKAMGDDKTIQDYKIQAGAAIHLVLALRGGRA---
A0A1E3I922/1-78          --------MIVKVKTLTGKEVDIDVQPDMIISKVKDRVEEKAGIPPVQQRLIFGGKAMNDEKAIQDYKIQAGAVIHLVLALRGGRA---
J9VQ81/1-78              --------MIVKVKTLTGKEVDIDVQPDMTISKVKERVEEKAGIPPVQQRLIFGGKAMGDDKTIQDYKIQAGAAIHLVLALRGGRA---
A0A226BL06/1-78          --------MIVKVKTLTGKEVDIDVQPDMTISKVKERVEEKAGIPPVQQRLIFGGKAMGDDKTIQDYKIQAGAAIHLVLALRGGRA---
A0A371C0W1/1-77          --------MKIKIKTLIGKEIEMDVEPEDQISVLKEKIEELEGIPPAQQRLVFTGKQLQDEKTIAENKIEAGASLHLVLALRGGN----
#=GC scorecons           00000000947978996999776996774495579877995599996999978699574979585767757994699999999941000
#=GC scorecons_70        ________*_******************__*__*******__**************_*_***_*_****_***_**********_____
#=GC scorecons_80        ________*__*****_***___**_**__*___**_***__****_******_**_*_*_*_*_*_**_***__*********_____
#=GC scorecons_90        ________*__*__**_***___**_____*___**__**__****_****_*_**___*_*_________**__*********_____
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