# STOCKHOLM 1.0
#=GF ID 3.10.20.90/FF/000284
#=GF DE Ubiquitin family protein
#=GF AC 3.10.20.90/FF/000284
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 67.056
#=GS Q03919/1-77      AC Q03919
#=GS Q03919/1-77      OS Saccharomyces cerevisiae S288C
#=GS Q03919/1-77      DE NEDD8-like protein RUB1
#=GS Q03919/1-77      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS Q03919/1-77      DR GO; GO:0005515; GO:0005737; GO:0031386; GO:0045116; 
#=GS M2SCV4/1-77      AC M2SCV4
#=GS M2SCV4/1-77      OS Entamoeba histolytica KU27
#=GS M2SCV4/1-77      DE Ubiquitin family protein
#=GS M2SCV4/1-77      DR ORG; Eukaryota; Entamoebidae; Entamoeba; Entamoeba histolytica; 
#=GS K2H5R3/1-77      AC K2H5R3
#=GS K2H5R3/1-77      OS Entamoeba nuttalli P19
#=GS K2H5R3/1-77      DE Ubiquitin domain containing protein, putative
#=GS K2H5R3/1-77      DR ORG; Eukaryota; Entamoebidae; Entamoeba; Entamoeba nuttalli; 
#=GS C4YQA6/1-77      AC C4YQA6
#=GS C4YQA6/1-77      OS Candida albicans WO-1
#=GS C4YQA6/1-77      DE Uncharacterized protein
#=GS C4YQA6/1-77      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Debaryomycetaceae; Candida; Candida albicans; 
#=GS Q750X4/1-76      AC Q750X4
#=GS Q750X4/1-76      OS Eremothecium gossypii ATCC 10895
#=GS Q750X4/1-76      DE AGL185Wp
#=GS Q750X4/1-76      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Eremothecium; Eremothecium gossypii; 
#=GS B9WDT9/1-77      AC B9WDT9
#=GS B9WDT9/1-77      OS Candida dubliniensis CD36
#=GS B9WDT9/1-77      DE Ubiquitin-like protein with similarity to mammalian NEDD8, putative
#=GS B9WDT9/1-77      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Debaryomycetaceae; Candida; Candida dubliniensis; 
#=GS C5M314/1-77      AC C5M314
#=GS C5M314/1-77      OS Candida tropicalis MYA-3404
#=GS C5M314/1-77      DE Uncharacterized protein
#=GS C5M314/1-77      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Debaryomycetaceae; Candida; Candida tropicalis; 
#=GS A0A1D8PJP6/1-77  AC A0A1D8PJP6
#=GS A0A1D8PJP6/1-77  OS Candida albicans SC5314
#=GS A0A1D8PJP6/1-77  DE NEDD8 family protein
#=GS A0A1D8PJP6/1-77  DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Debaryomycetaceae; Candida; Candida albicans; 
#=GS A6ZY99/1-77      AC A6ZY99
#=GS A6ZY99/1-77      OS Saccharomyces cerevisiae YJM789
#=GS A6ZY99/1-77      DE Ubiquitin-like protein with similarity to mammalian NEDD8
#=GS A6ZY99/1-77      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS G2WAN9/1-77      AC G2WAN9
#=GS G2WAN9/1-77      OS Saccharomyces cerevisiae Kyokai no. 7
#=GS G2WAN9/1-77      DE K7_Rub1p
#=GS G2WAN9/1-77      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS C7GIP4/1-77      AC C7GIP4
#=GS C7GIP4/1-77      OS Saccharomyces cerevisiae JAY291
#=GS C7GIP4/1-77      DE Rub1p
#=GS C7GIP4/1-77      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS B3LGE0/1-77      AC B3LGE0
#=GS B3LGE0/1-77      OS Saccharomyces cerevisiae RM11-1a
#=GS B3LGE0/1-77      DE Uncharacterized protein
#=GS B3LGE0/1-77      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS N1P4T1/1-77      AC N1P4T1
#=GS N1P4T1/1-77      OS Saccharomyces cerevisiae CEN.PK113-7D
#=GS N1P4T1/1-77      DE Rub1p
#=GS N1P4T1/1-77      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS C8Z555/1-77      AC C8Z555
#=GS C8Z555/1-77      OS Saccharomyces cerevisiae EC1118
#=GS C8Z555/1-77      DE Rub1p
#=GS C8Z555/1-77      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS C4LVJ5/1-77      AC C4LVJ5
#=GS C4LVJ5/1-77      OS Entamoeba histolytica
#=GS C4LVJ5/1-77      DE Ubiquitin domain protein putative
#=GS C4LVJ5/1-77      DR ORG; Eukaryota; Entamoebidae; Entamoeba; Entamoeba histolytica; 
#=GS N9TFZ1/1-77      AC N9TFZ1
#=GS N9TFZ1/1-77      OS Entamoeba histolytica HM-1:IMSS-A
#=GS N9TFZ1/1-77      DE Ubiquitin-like family protein, putative
#=GS N9TFZ1/1-77      DR ORG; Eukaryota; Entamoebidae; Entamoeba; Entamoeba histolytica; 
#=GS M3S3D4/1-77      AC M3S3D4
#=GS M3S3D4/1-77      OS Entamoeba histolytica HM-1:IMSS-B
#=GS M3S3D4/1-77      DE Ubiquitin domain containing protein, putative
#=GS M3S3D4/1-77      DR ORG; Eukaryota; Entamoebidae; Entamoeba; Entamoeba histolytica; 
#=GS M7X0B1/1-77      AC M7X0B1
#=GS M7X0B1/1-77      OS Entamoeba histolytica HM-3:IMSS
#=GS M7X0B1/1-77      DE Ubiquitin-like family protein
#=GS M7X0B1/1-77      DR ORG; Eukaryota; Entamoebidae; Entamoeba; Entamoeba histolytica; 
#=GF SQ 18
Q03919/1-77              MIVKVKTLTGKEISVELKESDLVYHIKELLEEKEGIPPSQQRLIFQGKQIDDKLTVTDAHLVEGMQLHLVLTLRGGN
M2SCV4/1-77              MLINIKLLNGRILSIDLEPTDKISDLKAKLEEIEGITPEQQRLVFGGRQLGDDKTLQELNIQPGTQINLLLALRGGF
K2H5R3/1-77              MLINIKLLNGRILSIDLEPTDKISDLKAKLEEIEGITPEQQRLVFGGRQLGDDKTLQELNIQPGTQINLLLALRGGF
C4YQA6/1-77              MQIKVKTLTGRDMPLDVEPQDKIIRIKEMMEEKEGISPAQQRLIFNGSQLNDDQTVQEAGIQAGASLHLVLTLRGGN
Q750X4/1-76              MLLKVKTLTGKEIQIDVAPEDKVYRIKELLEEQEGIPPSQQRLIFQGKQIDDDQTVMSARLAHGMQLHLVLTLRGG-
B9WDT9/1-77              MQIKVKTLTGRDMPLDVEPQDKIIRIKEMMEEKEGISPAQQRLIFNGSQLNDDQTVQEAGIQAGASLHLVLTLRGGN
C5M314/1-77              MQIKVKTLTGRDMPLDVEPQDKIIRIKEMMEEKEGISPAQQRLIFNGSQLNDDQTVQESGIQAGSSLHLVLTLRGGN
A0A1D8PJP6/1-77          MQIKVKTLTGRDMPLDVEPQDKIIRIKEMMEEKEGISPAQQRLIFNGSQLNDDQTVQEAGIQAGASLHLVLTLRGGN
A6ZY99/1-77              MIVKVKTLTGKEISVELKESDLVYHIKELLEEKEGIPPSQQRLIFQGKQIDDKLTVTDAHLVEGMQLHLVLTLRGGN
G2WAN9/1-77              MIVKVKTLTGKEISVELKESDLVYHIKELLEEKEGIPPSQQRLIFQGKQIDDKLTVTDAHLVEGMQLHLVLTLRGGN
C7GIP4/1-77              MIVKVKTLTGKEISVELKESDLVYHIKELLEEKEGIPPSQQRLIFQGKQIDDKLTVTDAHLVEGMQLHLVLTLRGGN
B3LGE0/1-77              MIVKVKTLTGKEISVELKESDLVYHIKELLEEKEGIPPSQQRLIFQGKQIDDKLTVTDAHLVEGMQLHLVLTLRGGN
N1P4T1/1-77              MIVKVKTLTGKEISVELKESDLVYHIKELLEEKEGIPPSQQRLIFQGKQIDDKLTVTDAHLVEGMQLHLVLTLRGGN
C8Z555/1-77              MIVKVKTLTGKEISVELKESDLVYHIKELLEEKEGIPPSQQRLIFQGKQIDDKLTVTDAHLVEGMQLHLVLTLRGGN
C4LVJ5/1-77              MLINIKLLNGRILSIDLEPTDKISDLKAKLEEIEGITPEQQRLVFGGRQLGDDKTLQELNIQPGTQINLLLALRGGF
N9TFZ1/1-77              MLINIKLLNGRILSIDLEPTDKISDLKAKLEEIEGITPEQQRLVFGGRQLGDDKTLQELNIQPGTQINLLLALRGGF
M3S3D4/1-77              MLINIKLLNGRILSIDLEPTDKISDLKAKLEEIEGITPEQQRLVFGGRQLGDDKTLQELNIQPGTQINLLLALRGGF
M7X0B1/1-77              MLINIKLLNGRILSIDLEPTDKISDLKAKLEEIEGITPEQQRLVFGGRQLGDDKTLQELNIQPGTQINLLLALRGGF
#=GC scorecons           94667959697456676554957446954799499959499997949596596496565464494666969699994
#=GC scorecons_70        *_****_****__*_**___*_*__**__***_***_*_******_*_**_*__**_*__*__*_***********_
#=GC scorecons_80        *___**_*_*_____*____*_____*__***_***_*_******_*_*__*__*________*____*_*_****_
#=GC scorecons_90        *____*_*_*__________*_____*___**_***_*_****_*_*_*__*__*________*____*_*_****_
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