# STOCKHOLM 1.0
#=GF ID 3.10.20.90/FF/000254
#=GF DE UV excision repair protein Rad23
#=GF AC 3.10.20.90/FF/000254
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 94.188
#=GS O74803/1-74      AC O74803
#=GS O74803/1-74      OS Schizosaccharomyces pombe 972h-
#=GS O74803/1-74      DE UV excision repair protein rhp23
#=GS O74803/1-74      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces; Schizosaccharomyces pombe; 
#=GS O74803/1-74      DR GO; GO:0003684; GO:0005515; GO:0005634; GO:0005635; GO:0005829; GO:0006289; GO:0030433; GO:0031593; GO:0042177; GO:0043130; 
#=GS Q9V3W9/1-78      AC Q9V3W9
#=GS Q9V3W9/1-78      OS Drosophila melanogaster
#=GS Q9V3W9/1-78      DE DNA repair protein Rad23
#=GS Q9V3W9/1-78      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila melanogaster; 
#=GS Q9V3W9/1-78      DR GO; GO:0000715; GO:0005634; GO:0005737; GO:0031593; GO:0032434; 
#=GS Q9XZE0/1-78      AC Q9XZE0
#=GS Q9XZE0/1-78      OS Drosophila melanogaster
#=GS Q9XZE0/1-78      DE DHR23
#=GS Q9XZE0/1-78      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila melanogaster; 
#=GS Q9XZE0/1-78      DR GO; GO:0000715; GO:0005634; GO:0005737; GO:0031593; GO:0032434; 
#=GS Q23451/1-81      AC Q23451
#=GS Q23451/1-81      OS Caenorhabditis elegans
#=GS Q23451/1-81      DE Uncharacterized protein
#=GS Q23451/1-81      DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis elegans; 
#=GS E9FR61/1-79      AC E9FR61
#=GS E9FR61/1-79      OS Daphnia pulex
#=GS E9FR61/1-79      DE Uncharacterized protein
#=GS E9FR61/1-79      DR ORG; Eukaryota; Metazoa; Arthropoda; Crustacea; Branchiopoda; Phyllopoda; Diplostraca; Cladocera; Anomopoda; Daphniidae; Daphnia; Daphnia pulex; 
#=GS A9UXZ9/1-76      AC A9UXZ9
#=GS A9UXZ9/1-76      OS Monosiga brevicollis
#=GS A9UXZ9/1-76      DE Predicted protein
#=GS A9UXZ9/1-76      DR ORG; Eukaryota; Choanoflagellida; Salpingoecidae; Monosiga; Monosiga brevicollis; 
#=GS B8C4Q4/1-72      AC B8C4Q4
#=GS B8C4Q4/1-72      OS Thalassiosira pseudonana
#=GS B8C4Q4/1-72      DE Rad23 like protein
#=GS B8C4Q4/1-72      DR ORG; Eukaryota; Bacillariophyta; Coscinodiscophyceae; Thalassiosirophycidae; Thalassiosirales; Thalassiosiraceae; Thalassiosira; Thalassiosira pseudonana; 
#=GS H9G610/1-58      AC H9G610
#=GS H9G610/1-58      OS Anolis carolinensis
#=GS H9G610/1-58      DE Uncharacterized protein
#=GS H9G610/1-58      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Lepidosauria; Squamata; Iguania; Dactyloidae; Anolis; Anolis carolinensis; 
#=GS F4NZT2/1-76      AC F4NZT2
#=GS F4NZT2/1-76      OS Batrachochytrium dendrobatidis JAM81
#=GS F4NZT2/1-76      DE Uncharacterized protein
#=GS F4NZT2/1-76      DR ORG; Eukaryota; Fungi; Chytridiomycota; Chytridiomycetes; Rhizophydiales; Batrachochytrium; Batrachochytrium dendrobatidis; 
#=GS B7Q760/1-79      AC B7Q760
#=GS B7Q760/1-79      OS Ixodes scapularis
#=GS B7Q760/1-79      DE Nucleotide excision repair factor NEF2, RAD23 component, putative
#=GS B7Q760/1-79      DR ORG; Eukaryota; Metazoa; Arthropoda; Chelicerata; Arachnida; Acari; Parasitiformes; Ixodida; Ixodoidea; Ixodidae; Ixodinae; Ixodes; Ixodes scapularis; 
#=GS Q55YV4/1-75      AC Q55YV4
#=GS Q55YV4/1-75      OS Cryptococcus neoformans var. neoformans B-3501A
#=GS Q55YV4/1-75      DE Uncharacterized protein
#=GS Q55YV4/1-75      DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Tremellomycetes; Tremellales; Cryptococcaceae; Cryptococcus; Cryptococcus neoformans species complex; Cryptococcus neoformans; Cryptococcus neoformans var. neoformans; 
#=GS H3FSL9/4-77      AC H3FSL9
#=GS H3FSL9/4-77      OS Pristionchus pacificus
#=GS H3FSL9/4-77      DE Uncharacterized protein
#=GS H3FSL9/4-77      DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Diplogasteromorpha; Diplogasteroidea; Neodiplogasteridae; Pristionchus; Pristionchus pacificus; 
#=GS A0A0D0V7L0/1-78  AC A0A0D0V7L0
#=GS A0A0D0V7L0/1-78  OS Cryptococcus gattii VGII Ram5
#=GS A0A0D0V7L0/1-78  DE Unplaced genomic scaffold supercont1.3, whole genome shotgun sequence
#=GS A0A0D0V7L0/1-78  DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Tremellomycetes; Tremellales; Cryptococcaceae; Cryptococcus; Cryptococcus gattii species complex; Cryptococcus gattii VGII; 
#=GS A0A1E3I2U9/1-78  AC A0A1E3I2U9
#=GS A0A1E3I2U9/1-78  OS Cryptococcus amylolentus CBS 6039
#=GS A0A1E3I2U9/1-78  DE UV excision repair protein Rad23
#=GS A0A1E3I2U9/1-78  DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Tremellomycetes; Tremellales; Cryptococcaceae; Cryptococcus; Cryptococcus amylolentus; 
#=GS A0A226BRV1/1-78  AC A0A226BRV1
#=GS A0A226BRV1/1-78  OS Cryptococcus neoformans var. grubii Bt85
#=GS A0A226BRV1/1-78  DE UV excision repair protein Rad23
#=GS A0A226BRV1/1-78  DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Tremellomycetes; Tremellales; Cryptococcaceae; Cryptococcus; Cryptococcus neoformans species complex; Cryptococcus neoformans; Cryptococcus neoformans var. grubii; 
#=GS B4IIV6/1-78      AC B4IIV6
#=GS B4IIV6/1-78      OS Drosophila sechellia
#=GS B4IIV6/1-78      DE GM26792
#=GS B4IIV6/1-78      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila sechellia; 
#=GS A0A1W4VKJ7/1-78  AC A0A1W4VKJ7
#=GS A0A1W4VKJ7/1-78  OS Drosophila ficusphila
#=GS A0A1W4VKJ7/1-78  DE UV excision repair protein RAD23 homolog A
#=GS A0A1W4VKJ7/1-78  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; ficusphila subgroup; Drosophila ficusphila; 
#=GS B3P9U2/1-78      AC B3P9U2
#=GS B3P9U2/1-78      OS Drosophila erecta
#=GS B3P9U2/1-78      DE Uncharacterized protein, isoform A
#=GS B3P9U2/1-78      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila erecta; 
#=GS A0A0R1EBP1/1-78  AC A0A0R1EBP1
#=GS A0A0R1EBP1/1-78  OS Drosophila yakuba
#=GS A0A0R1EBP1/1-78  DE Uncharacterized protein, isoform B
#=GS A0A0R1EBP1/1-78  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila yakuba; 
#=GS A0A0Q5SUE2/1-78  AC A0A0Q5SUE2
#=GS A0A0Q5SUE2/1-78  OS Drosophila erecta
#=GS A0A0Q5SUE2/1-78  DE Uncharacterized protein, isoform B
#=GS A0A0Q5SUE2/1-78  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila erecta; 
#=GS B4PW00/1-78      AC B4PW00
#=GS B4PW00/1-78      OS Drosophila yakuba
#=GS B4PW00/1-78      DE Uncharacterized protein, isoform A
#=GS B4PW00/1-78      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila yakuba; 
#=GS A0A0J9S0R4/1-78  AC A0A0J9S0R4
#=GS A0A0J9S0R4/1-78  OS Drosophila simulans
#=GS A0A0J9S0R4/1-78  DE Rad23
#=GS A0A0J9S0R4/1-78  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila simulans; 
#=GS Q5KN72/1-78      AC Q5KN72
#=GS Q5KN72/1-78      OS Cryptococcus neoformans var. neoformans JEC21
#=GS Q5KN72/1-78      DE Uv excision repair protein rhp23, putative
#=GS Q5KN72/1-78      DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Tremellomycetes; Tremellales; Cryptococcaceae; Cryptococcus; Cryptococcus neoformans species complex; Cryptococcus neoformans; Cryptococcus neoformans var. neoformans; 
#=GS A0A0L6DI18/1-78  AC A0A0L6DI18
#=GS A0A0L6DI18/1-78  OS Cryptococcus gattii VGII R265
#=GS A0A0L6DI18/1-78  DE UV excision repair protein Rad23
#=GS A0A0L6DI18/1-78  DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Tremellomycetes; Tremellales; Cryptococcaceae; Cryptococcus; Cryptococcus gattii species complex; Cryptococcus gattii VGII; 
#=GS A0A226A0Z8/1-78  AC A0A226A0Z8
#=GS A0A226A0Z8/1-78  OS Cryptococcus neoformans var. grubii c45
#=GS A0A226A0Z8/1-78  DE UV excision repair protein Rad23
#=GS A0A226A0Z8/1-78  DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Tremellomycetes; Tremellales; Cryptococcaceae; Cryptococcus; Cryptococcus neoformans species complex; Cryptococcus neoformans; Cryptococcus neoformans var. grubii; 
#=GS J9VFR1/1-78      AC J9VFR1
#=GS J9VFR1/1-78      OS Cryptococcus neoformans var. grubii H99
#=GS J9VFR1/1-78      DE UV excision repair protein Rad23
#=GS J9VFR1/1-78      DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Tremellomycetes; Tremellales; Cryptococcaceae; Cryptococcus; Cryptococcus neoformans species complex; Cryptococcus neoformans; Cryptococcus neoformans var. grubii; 
#=GS A0A177WER0/1-76  AC A0A177WER0
#=GS A0A177WER0/1-76  OS Batrachochytrium dendrobatidis JEL423
#=GS A0A177WER0/1-76  DE UV excision repair protein Rad23
#=GS A0A177WER0/1-76  DR ORG; Eukaryota; Fungi; Chytridiomycota; Chytridiomycetes; Rhizophydiales; Batrachochytrium; Batrachochytrium dendrobatidis; 
#=GF SQ 27
O74803/1-74              --MNLTFKNLQQQKFVISDVSADTKISELKEKIQTQQN---YEVERQKLIYSGRILADDKTVGEYNIKEQDFIVCMVSR----
Q9V3W9/1-78              --MIITIKNLQQQTFTI-EFAPEKTVLELKKKIFEERGPE-YVAEKQKLIYAGVILTDDRTVGSYNVDEKKFIVVMLTRDSS-
Q9XZE0/1-78              --MIITIKNLQQQTFTI-EFAPEKTVLELKKKIFEERGPE-YVAEKQKLIYAGVILTDDRTVGSYNVDEKKFIVVMLTRDSS-
Q23451/1-81              MVLSVTFRTLTQVNFNL-ELNEDQTIAEVKALVASEKGDD-YAPELQKLIYNGKILDDSVKVGEVGFDSSKFVVVMLSKRKVT
E9FR61/1-79              --MLVTFKTLQNTTFQI-EIDPSSTVKTLKEKIEKEKGVD-YPAVGQKLIYAGKILDDVSVLSEHGIDEKKFIVIMVTKPKAS
A9UXZ9/1-76              --MKVTIKTIKDGTFDL-QMGDDATIGEVKAAIEQSKGDK-YPKDGLKVIYQGKVLGDSDTLASANFQEKDFLVVMASKA---
B8C4Q4/1-72              --MNLTVKTLKGGKFTV-EVEAEKTVAEVKVAIQTNKD---LPASSMKLIHSGKVLKDEDKIESCNIKPNDFLVVMIA-----
H9G610/1-58              -------------------------VRVLKEKIEAEKGKDSFPVSGQKLIYAGKILSDDVPIKEYKIDEKNFVVVMVTKNKAG
F4NZT2/1-76              --MKLTFKTLQQDNFQV-EVEQTAKVIEVKEAILAAKG---YTVASQKLIHSGKILNDASTIEELKISEKDFIVVMVSKPKP-
B7Q760/1-79              --MIVTLKTLQQQSFKV-EIDPSDTVKVFKEKIEVEKGKE-YPAQYQKLIYAGKILNDDSKMSEYDIEEKKFVVIMVTKPKCG
Q55YV4/1-75              -MVKITFKTVQNKLFTV-DAQDSDTVADLKKKIQETQT---FPVENQKLIYSGKILNDASSVESLKIKEKDFLVVMVSRA---
H3FSL9/4-77              -MVEITFKTLTQEAFKL-ELQPSDKIADVKAKIAELRG---DAADLQKLLYNGKVLADESTVEECTLDPARFVVLMVTK----
A0A0D0V7L0/1-78          -MVKITFKTVQNKLFTV-DAQGSDTVADLKKKIQETQS---FPVENQKLIYSGKILNDASSVESLKIKEKDFLVVMVSRPKAT
A0A1E3I2U9/1-78          -MVKITFKTVQNKLFTV-EAQDSETVADLKQKIQESQT---FPAENQKLIYSGKILNDSSSVESLKIKEKDFLVVMVSRPKAA
A0A226BRV1/1-78          -MVKITFKTVQNKLFTV-DAQDSDTVADLKKKIQETQT---FPVENQKLIYSGKILNDASSVESLKIKEKDFLVVMVSRPKAT
B4IIV6/1-78              --MIITIKNLQQQTFTI-EFAPEKTVLELKKKIFDERGSE-YVAEKQKLIYAGVILTDDRTVGSYNVDEKKFIVVMLTRDSS-
A0A1W4VKJ7/1-78          --MIITVKNLQQQTFTI-EFSPEKTVLELKKKIFDERGAE-YVAEKQKLIYAGVILTDDRTVGSYNVDEKKFIVVMLTRDSS-
B3P9U2/1-78              --MIITIKNLQQQTFTI-EFAPEKTVLELKKKIFDERGPE-YVAEKQKLIYAGVILTDDRTVDSYNVDDKKFIVVMLTRDSS-
A0A0R1EBP1/1-78          --MIITIKNLQQQTFTI-EFAPEKTVLELKKKIFDERGPE-YVAEKQKLIYAGVILTDDRTVGSYNVDEKKFIVVMLTRDSS-
A0A0Q5SUE2/1-78          --MIITIKNLQQQTFTI-EFAPEKTVLELKKKIFDERGPE-YVAEKQKLIYAGVILTDDRTVDSYNVDDKKFIVVMLTRDSS-
B4PW00/1-78              --MIITIKNLQQQTFTI-EFAPEKTVLELKKKIFDERGPE-YVAEKQKLIYAGVILTDDRTVGSYNVDEKKFIVVMLTRDSS-
A0A0J9S0R4/1-78          --MIITIKNLQQQTFTI-EFAPEKTVLELKKKIFDERGPE-YVAEKQKLIYAGVILTDDRTVGSYNVDEKKFIVVMLTRDSS-
Q5KN72/1-78              -MVKITFKTVQNKLFTV-DAQDSDTVADLKKKIQETQT---FPVENQKLIYSGKILNDASSVESLKIKEKDFLVVMVSRPKAT
A0A0L6DI18/1-78          -MVKITFKTVQNKLFTV-DAQGSDTVADLKKKIQETQS---FPVENQKLIYSGKILNDASSVESLKIKEKDFLVVMVSRPKAT
A0A226A0Z8/1-78          -MVKITFKTVQNKLFTV-DAQDSDTVADLKKKIQETQT---FPVENQKLIYSGKILNDASSVESLKIKEKDFLVVMVSRPKAT
J9VFR1/1-78              -MVKITFKTVQNKLFTV-DAQGSDTVADLKKKIQETQT---FPVENQKLIYSGKILNDASSVESLKIKEKDFLVVMVSRPKAT
A0A177WER0/1-76          --MKLTFKTLQQDNFQV-EVEQTAKVIEVKEAILAAKG---YTVASQKLIHSGKILNDASTIEELKISEKDFIVVMVSKPKP-
#=GC scorecons           00535747556433745063334367456946834455010645537988859589494446454565665969796563330
#=GC scorecons_70        _____*_*______*__________*__**_**________*____*****_*_**_*___*____*_**_*_***__*____
#=GC scorecons_80        _____*_*______*__________*___*__*_____________*****_*_**_*_____________*_***_______
#=GC scorecons_90        _____________________________*__*______________****_*__*_*_____________*_*_*_______
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