# STOCKHOLM 1.0 #=GF ID 3.10.20.90/FF/000222 #=GF DE Polyubiquitin 5 #=GF AC 3.10.20.90/FF/000222 #=GF TP FunFam #=GF DR CATH: v4.3 #=GF DR DOPS: 93.659 #=GS Q29W12/77-156 AC Q29W12 #=GS Q29W12/77-156 OS Salmo salar #=GS Q29W12/77-156 DE ISG15-like protein #=GS Q29W12/77-156 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Euteleosteomorpha; Salmoniformes; Salmonidae; Salmoninae; Salmo; Salmo salar; #=GS Q29W12/77-156 DR GO; GO:0005615; GO:0034340; GO:0051607; GO:0071357; GO:0098586; #=GS Q8AXA2/78-156 AC Q8AXA2 #=GS Q8AXA2/78-156 OS Oncorhynchus mykiss #=GS Q8AXA2/78-156 DE Ubiquitin-like protein #=GS Q8AXA2/78-156 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Euteleosteomorpha; Salmoniformes; Salmonidae; Salmoninae; Oncorhynchus; Oncorhynchus mykiss; #=GS Q8AXA2/78-156 DR GO; GO:0034340; #=GS A8JJS7/174-244 AC A8JJS7 #=GS A8JJS7/174-244 OS Chlamydomonas reinhardtii #=GS A8JJS7/174-244 DE Bi-ubiquitin #=GS A8JJS7/174-244 DR ORG; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Chlamydomonadaceae; Chlamydomonas; Chlamydomonas reinhardtii; #=GS P23398/1-56 AC P23398 #=GS P23398/1-56 OS Strongylocentrotus purpuratus #=GS P23398/1-56 DE Polyubiquitin #=GS P23398/1-56 DR ORG; Eukaryota; Metazoa; Echinodermata; Echinozoa; Echinoidea; Euechinoidea; Echinacea; Echinoida; Strongylocentrotidae; Strongylocentrotus; Strongylocentrotus purpuratus; #=GS A7RSG9/82-147 AC A7RSG9 #=GS A7RSG9/82-147 OS Nematostella vectensis #=GS A7RSG9/82-147 DE Predicted protein #=GS A7RSG9/82-147 DR ORG; Eukaryota; Metazoa; Cnidaria; Anthozoa; Hexacorallia; Actiniaria; Edwardsiidae; Nematostella; Nematostella vectensis; #=GS A0DL17/78-156 AC A0DL17 #=GS A0DL17/78-156 OS Paramecium tetraurelia #=GS A0DL17/78-156 DE Uncharacterized protein #=GS A0DL17/78-156 DR ORG; Eukaryota; Ciliophora; Intramacronucleata; Oligohymenophorea; Peniculida; Parameciidae; Paramecium; Paramecium tetraurelia; #=GS A0A0J9SLN5/1-56 AC A0A0J9SLN5 #=GS A0A0J9SLN5/1-56 OS Plasmodium vivax Brazil I #=GS A0A0J9SLN5/1-56 DE Polyubiquitin 5 #=GS A0A0J9SLN5/1-56 DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Plasmodium); Plasmodium vivax; #=GS A2G771/35-109 AC A2G771 #=GS A2G771/35-109 OS Trichomonas vaginalis #=GS A2G771/35-109 DE Polyubiquitin, putative #=GS A2G771/35-109 DR ORG; Eukaryota; Trichomonadida; Trichomonadidae; Trichomonas; Trichomonas vaginalis; #=GS A0A1J4KLU0/1-76 AC A0A1J4KLU0 #=GS A0A1J4KLU0/1-76 OS Tritrichomonas foetus #=GS A0A1J4KLU0/1-76 DE Polyubiquitin #=GS A0A1J4KLU0/1-76 DR ORG; Eukaryota; Tritrichomonadida; Tritrichomonadidae; Tritrichomonas; Tritrichomonas foetus; #=GS I1H3C7/79-151 AC I1H3C7 #=GS I1H3C7/79-151 OS Brachypodium distachyon #=GS I1H3C7/79-151 DE Uncharacterized protein #=GS I1H3C7/79-151 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Pooideae; Brachypodieae; Brachypodium; Brachypodium distachyon; #=GS A0A3N7FC15/1-71 AC A0A3N7FC15 #=GS A0A3N7FC15/1-71 OS Populus trichocarpa #=GS A0A3N7FC15/1-71 DE Uncharacterized protein #=GS A0A3N7FC15/1-71 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Malpighiales; Salicaceae; Saliceae; Populus; Populus trichocarpa; #=GS A0A2K6P3M7/77-151 AC A0A2K6P3M7 #=GS A0A2K6P3M7/77-151 OS Rhinopithecus roxellana #=GS A0A2K6P3M7/77-151 DE Uncharacterized protein #=GS A0A2K6P3M7/77-151 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Cercopithecoidea; Cercopithecidae; Colobinae; Rhinopithecus; Rhinopithecus roxellana; #=GS O81975/1-54 AC O81975 #=GS O81975/1-54 OS Glycine max #=GS O81975/1-54 DE Polyubiquitin #=GS O81975/1-54 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja; Glycine max; #=GS A0A1D1YNW4/1-55 AC A0A1D1YNW4 #=GS A0A1D1YNW4/1-55 OS Anthurium amnicola #=GS A0A1D1YNW4/1-55 DE Ubiquitin-NEDD8-like protein RUB2 #=GS A0A1D1YNW4/1-55 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Alismatales; Araceae; Pothoideae; Potheae; Anthurium; Anthurium amnicola; #=GS W5NNN6/77-158 AC W5NNN6 #=GS W5NNN6/77-158 OS Lepisosteus oculatus #=GS W5NNN6/77-158 DE ISG15 ubiquitin-like modifier #=GS W5NNN6/77-158 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Holostei; Semionotiformes; Lepisosteidae; Lepisosteus; Lepisosteus oculatus; #=GS A0A1D6I4G6/31-115 AC A0A1D6I4G6 #=GS A0A1D6I4G6/31-115 OS Zea mays #=GS A0A1D6I4G6/31-115 DE Ubiquitin-NEDD8-like protein RUB1 #=GS A0A1D6I4G6/31-115 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Tripsacinae; Zea; Zea mays; #=GS A2BHB8/78-157 AC A2BHB8 #=GS A2BHB8/78-157 OS Danio rerio #=GS A2BHB8/78-157 DE ISG15 ubiquitin-like modifier #=GS A2BHB8/78-157 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Otomorpha; Ostariophysi; Cypriniphysae; Cypriniformes; Cyprinoidei; Cyprinidae; Danio; Danio rerio; #=GS A0A287TET9/1-56 AC A0A287TET9 #=GS A0A287TET9/1-56 OS Hordeum vulgare subsp. vulgare #=GS A0A287TET9/1-56 DE Uncharacterized protein #=GS A0A287TET9/1-56 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Pooideae; Triticeae; Hordeinae; Hordeum; Hordeum vulgare; Hordeum vulgare subsp. vulgare; #=GS A0A2I2YAZ3/77-151 AC A0A2I2YAZ3 #=GS A0A2I2YAZ3/77-151 OS Gorilla gorilla gorilla #=GS A0A2I2YAZ3/77-151 DE Uncharacterized protein #=GS A0A2I2YAZ3/77-151 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Gorilla; Gorilla gorilla; Gorilla gorilla gorilla; #=GS A0A2I3MSH2/77-151 AC A0A2I3MSH2 #=GS A0A2I3MSH2/77-151 OS Papio anubis #=GS A0A2I3MSH2/77-151 DE Uncharacterized protein #=GS A0A2I3MSH2/77-151 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Cercopithecoidea; Cercopithecidae; Cercopithecinae; Papio; Papio anubis; #=GS A0A2K6BBQ1/75-151 AC A0A2K6BBQ1 #=GS A0A2K6BBQ1/75-151 OS Macaca nemestrina #=GS A0A2K6BBQ1/75-151 DE Uncharacterized protein #=GS A0A2K6BBQ1/75-151 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Cercopithecoidea; Cercopithecidae; Cercopithecinae; Macaca; Macaca nemestrina; #=GS A0A2K5HIF8/77-151 AC A0A2K5HIF8 #=GS A0A2K5HIF8/77-151 OS Colobus angolensis palliatus #=GS A0A2K5HIF8/77-151 DE Uncharacterized protein #=GS A0A2K5HIF8/77-151 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Cercopithecoidea; Cercopithecidae; Colobinae; Colobus; Colobus angolensis; Colobus angolensis palliatus; #=GS A0A2K5KPD7/77-151 AC A0A2K5KPD7 #=GS A0A2K5KPD7/77-151 OS Cercocebus atys #=GS A0A2K5KPD7/77-151 DE Uncharacterized protein #=GS A0A2K5KPD7/77-151 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Cercopithecoidea; Cercopithecidae; Cercopithecinae; Cercocebus; Cercocebus atys; #=GS A0A2K5YN51/77-151 AC A0A2K5YN51 #=GS A0A2K5YN51/77-151 OS Mandrillus leucophaeus #=GS A0A2K5YN51/77-151 DE Uncharacterized protein #=GS A0A2K5YN51/77-151 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Cercopithecoidea; Cercopithecidae; Cercopithecinae; Mandrillus; Mandrillus leucophaeus; #=GS A0A2K5WZW0/75-151 AC A0A2K5WZW0 #=GS A0A2K5WZW0/75-151 OS Macaca fascicularis #=GS A0A2K5WZW0/75-151 DE Uncharacterized protein #=GS A0A2K5WZW0/75-151 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Cercopithecoidea; Cercopithecidae; Cercopithecinae; Macaca; Macaca fascicularis; #=GS A0A1D5RFQ1/75-151 AC A0A1D5RFQ1 #=GS A0A1D5RFQ1/75-151 OS Macaca mulatta #=GS A0A1D5RFQ1/75-151 DE Uncharacterized protein #=GS A0A1D5RFQ1/75-151 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Cercopithecoidea; Cercopithecidae; Cercopithecinae; Macaca; Macaca mulatta; #=GS B5XFU9/77-156 AC B5XFU9 #=GS B5XFU9/77-156 OS Salmo salar #=GS B5XFU9/77-156 DE Ubiquitin-like protein #=GS B5XFU9/77-156 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Euteleosteomorpha; Salmoniformes; Salmonidae; Salmoninae; Salmo; Salmo salar; #=GS B5XFU9/77-156 DR GO; GO:0005615; GO:0034340; GO:0051607; GO:0071357; GO:0098586; #=GS B9HGV6/1-72 AC B9HGV6 #=GS B9HGV6/1-72 OS Populus trichocarpa #=GS B9HGV6/1-72 DE Uncharacterized protein #=GS B9HGV6/1-72 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Malpighiales; Salicaceae; Saliceae; Populus; Populus trichocarpa; #=GS A0A1D6LQK5/1-77 AC A0A1D6LQK5 #=GS A0A1D6LQK5/1-77 OS Zea mays #=GS A0A1D6LQK5/1-77 DE Ubiquitin3 #=GS A0A1D6LQK5/1-77 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Tripsacinae; Zea; Zea mays; #=GS A2G770/1-76 AC A2G770 #=GS A2G770/1-76 OS Trichomonas vaginalis #=GS A2G770/1-76 DE Polyubiquitin #=GS A2G770/1-76 DR ORG; Eukaryota; Trichomonadida; Trichomonadidae; Trichomonas; Trichomonas vaginalis; #=GS A2DUU0/1-76 AC A2DUU0 #=GS A2DUU0/1-76 OS Trichomonas vaginalis #=GS A2DUU0/1-76 DE Polyubiquitin, putative #=GS A2DUU0/1-76 DR ORG; Eukaryota; Trichomonadida; Trichomonadidae; Trichomonas; Trichomonas vaginalis; #=GS A2EWW1/1-76 AC A2EWW1 #=GS A2EWW1/1-76 OS Trichomonas vaginalis #=GS A2EWW1/1-76 DE Polyubiquitin, putative #=GS A2EWW1/1-76 DR ORG; Eukaryota; Trichomonadida; Trichomonadidae; Trichomonas; Trichomonas vaginalis; #=GS A2DGQ5/77-147 AC A2DGQ5 #=GS A2DGQ5/77-147 OS Trichomonas vaginalis #=GS A2DGQ5/77-147 DE Polyubiquitin, putative #=GS A2DGQ5/77-147 DR ORG; Eukaryota; Trichomonadida; Trichomonadidae; Trichomonas; Trichomonas vaginalis; #=GS I1IJG2/81-151 AC I1IJG2 #=GS I1IJG2/81-151 OS Brachypodium distachyon #=GS I1IJG2/81-151 DE Uncharacterized protein #=GS I1IJG2/81-151 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Pooideae; Brachypodieae; Brachypodium; Brachypodium distachyon; #=GF SQ 34 Q29W12/77-156 --EPAPIQVFLKNEKGQTHTY-DVVPGE-----TVTQFKAKVQNKEGVPANQQRLIHEGRQLEDCQTLEYYNIRNQSTIHLALRLRGG---- Q8AXA2/78-156 ---PVPIQVFLKNEKGQTHTY-DVVPGE-----TVTQFKAKVQNKEAVPANQQRLIHEGRQLEDGQKLENYNIRNQSTIYLTLRLRGG---- A8JJS7/174-244 -------PLYVKTLTGKTITLQDVHSDL-----DVYDLKCMIDELEGIPPDEQRLVFAGRQLEDADTLASYNISKESTLHLIL--------- P23398/1-56 ---------------------------D-----SIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG---- A7RSG9/82-147 ------------KAHWKTFTL-DVEASD-----TVESVKEKIQNREGIPPKVQRLLYEEEELVDNRSLADYNIKQGSILHLFLI-------- A0DL17/78-156 -------QVFVKTMTGKTITI-TTEYDK-----TIGELKKLIYEKIGIPPQQQKLIFAGKVLDDCKKMEDYNIQKESTIHMTERLKGGFSDK A0A0J9SLN5/1-56 ---------------------------D-----TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG---- A2G771/35-109 -------XXXVKTLTGKHITL-EVEPTD-----RIEDVKTKIQDKEGIPPDQQRLIFAGKQLEDGNTLQDYSIQKDSTLHLVLRLRGG---- A0A1J4KLU0/1-76 ------MQIFVKTLTGKHITL-EVEPTD-----RIEDVKAKIQDKEGIPPDQQRLIFAGKQLEDGNTLQDYSIQKDSTLHLVLRLRGG---- I1H3C7/79-151 -------IIVQHYVSMTTITL-EVEPLY-----TIDIVKAKIQDTVGIPAGEQRLIFAGRQVEDGCTLADCSIQNESTLTLIIRLR------ A0A3N7FC15/1-71 ------MQIIV----GKN-TL-EVDSSD-----TIDSVKAKIQDKEGIPPDQLRLFFAGKRLEDGRTLADYNIQKGSTLHLNLRLRGG---- A0A2K6P3M7/77-151 ------MQIFVKTLIGKTITL-EVEPSD-----TIKNVKAKIQDKEVTPYQR--LILAGKQLEDGHTLSDYDIQKESTLHLVLHLRSGC--- O81975/1-54 ----------------------------------VDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG---- A0A1D1YNW4/1-55 ----------------------------------IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGT--- W5NNN6/77-158 IAEQRPFQIFLRNDRGQTHTY-DVTPDM-----TVKKFKSKVHEVERVPVDQQRLIFGGIQMEDGKTLEYYKIKPESTIFLDLRLRGG---- A0A1D6I4G6/31-115 ---PSSTTVRGRKRRGEDADL-REDPDGEDHHPRGGEQRHRRQRQSQNPADQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGT--- A2BHB8/78-157 --NPGTFQVFVKNEKGQVKTY-DVDANE-----TVDQLQTKIYQKERVPKDQQRLIFKGRQLESGMKLQDYDITSLSTIHMTLRLRGG---- A0A287TET9/1-56 ---------------------------X-----TIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG---- A0A2I2YAZ3/77-151 ------MQIFVKTLTGKTITL-EVEPSD-----TMENVKAKIQDKEGTPHPQ--LIFAGKQLEDGRTLSDYNIQKESTLHLVLHLRGGC--- A0A2I3MSH2/77-151 ------MQIFVKTLIGKTITL-EVEPND-----TIKNVKAKIQDKEGTPYPQ--LIFAGKQLEDGRTLSDYDIQKESTLHLVLHLRSGC--- A0A2K6BBQ1/75-151 ----GSMQIFVKTLIGKTITL-EVEPSG-----TIKNVKAKIQDKEGTPYPQ--LIFAGKQLEDGRTLSDYDIQKESTLHLVLHLRSGC--- A0A2K5HIF8/77-151 ------MQIFVKTLIGKTITL-EVEPSD-----TIKNAKAKVQDKEVTPYPQ--LIFAGKQLEDGCTLSDYDIQKESTLHLVLHLRRGC--- A0A2K5KPD7/77-151 ------MQIFVKTLIGKTITL-EVEPSD-----TIKNVKAKIQDKEGTPYPQ--LTFAGKQLEDGRTLSDYDIQKESTLHLVLHLRSGC--- A0A2K5YN51/77-151 ------MQIFVKTLIGKTITL-KVEPND-----TIKNVKAKIQDKEGTPYPQ--FIFAGKQLEDGRTLSDYDIQKESTLHLVLHLRSGC--- A0A2K5WZW0/75-151 ----GSMQIFVKTLIGKTITL-EVEPSG-----TIKNVKAKIQDKEGTPYPQ--LIFAGKQLEDGRTLSDYDIQKESTLHLVLHLRSGC--- A0A1D5RFQ1/75-151 ----GSMQIFVKTLIGKTITL-EVEPSG-----TIKNVKAKIQDKEGTPYPQ--LIFAGKQLEDGRTLSDYDIQKESTLHLVLHLRSGC--- B5XFU9/77-156 --EPAPIQVFLKNEKGQTHTY-DVVPGE-----TVTQFKAKVQNKEGVPANQQRLIHEGRQLEDCQTLEYYNIRNQSTIHLTLRLRGG---- B9HGV6/1-72 ------MQIIV----GKN-TL-EVDSSD-----TIDSVKAKIQDKEGIPPDQLRLFFAGKRLEDGRTLADYNIQKGSTLHLNLRLRGGT--- A0A1D6LQK5/1-77 ------MQLFILTLTGKTITV-EVESSD-----TIDNVKAKIQDKEGILPDHQRLIFAGKQLEDGKTLADYNIQKESTLPLVLRLKGGT--- A2G770/1-76 ------MQIFVKTLTGKHITL-EVEPTD-----RIEDVKAKIQDKEGIPPDQQRLIFAGKQLEDGNTLQDYSIQKDSTLHLVLRLRGG---- A2DUU0/1-76 ------MQIFVKTLTGKHITL-EVEPTD-----RIEDVKAKIQDKEGIPPDQQRLIFAGKQLEDGNTLQDYSIQKDSTLHLVLRLRGG---- A2EWW1/1-76 ------MQIFVKTLTGKHITL-EVEPTD-----RIEDVKAKIQDKEDIPPDQQRLIFAGKQLEDGNTLQDYSIQKDSTLHLVLRLRGG---- A2DGQ5/77-147 ------MQIFVKTLTGKHITL-EVEPTD-----RIEDVKAKIQDKEGIPPDQQRLIFAGKQLEDGNTLQDYSIQKDSILRCGF--------- I1IJG2/81-151 ---GTTMRICVRTMDGKEIPL-DVESSD-----TVDDVKMKIYEKDGTRPVQQRLIHEGIRLLDDYTLADYEIEKGDIRS------------ #=GC scorecons 00000023433332254335404534340000056446857766676584474587768678786478468596658766747566450000 #=GC scorecons_70 __________________________________*___*_***_***_*__*__***_*******_**_**_***_*****_*_*_______ #=GC scorecons_80 ______________________________________*_**___*__*__*__**__*_****__**__*_*___**__*___________ #=GC scorecons_90 ______________________________________*_________*_____*___*__*_*___*__*_*___*_______________ //