# STOCKHOLM 1.0 #=GF ID 2.70.170.10/FF/000056 #=GF DE Ligand-Gated ion Channel #=GF AC 2.70.170.10/FF/000056 #=GF TP FunFam #=GF DR CATH: v4.3 #=GF DR DOPS: 85.480 #=GS H2KZY7/57-262 AC H2KZY7 #=GS H2KZY7/57-262 OS Caenorhabditis elegans #=GS H2KZY7/57-262 DE Ligand-Gated ion Channel #=GS H2KZY7/57-262 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis elegans; #=GS Q8TA50/57-262 AC Q8TA50 #=GS Q8TA50/57-262 OS Caenorhabditis elegans #=GS Q8TA50/57-262 DE Ligand-Gated ion Channel #=GS Q8TA50/57-262 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis elegans; #=GS Q22588/37-213 AC Q22588 #=GS Q22588/37-213 OS Caenorhabditis elegans #=GS Q22588/37-213 DE Ligand-Gated ion Channel #=GS Q22588/37-213 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis elegans; #=GS H3FAJ1/35-231 AC H3FAJ1 #=GS H3FAJ1/35-231 OS Pristionchus pacificus #=GS H3FAJ1/35-231 DE Uncharacterized protein #=GS H3FAJ1/35-231 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Diplogasteromorpha; Diplogasteroidea; Neodiplogasteridae; Pristionchus; Pristionchus pacificus; #=GS A0A2G5UWY2/16-215 AC A0A2G5UWY2 #=GS A0A2G5UWY2/16-215 OS Caenorhabditis nigoni #=GS A0A2G5UWY2/16-215 DE Uncharacterized protein #=GS A0A2G5UWY2/16-215 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis nigoni; #=GS A8XHS3/54-259 AC A8XHS3 #=GS A8XHS3/54-259 OS Caenorhabditis briggsae #=GS A8XHS3/54-259 DE Protein CBR-LGC-27 #=GS A8XHS3/54-259 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis briggsae; #=GS G0N789/52-255 AC G0N789 #=GS G0N789/52-255 OS Caenorhabditis brenneri #=GS G0N789/52-255 DE Uncharacterized protein #=GS G0N789/52-255 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis brenneri; #=GS A0A1I7UDM3/61-263 AC A0A1I7UDM3 #=GS A0A1I7UDM3/61-263 OS Caenorhabditis tropicalis #=GS A0A1I7UDM3/61-263 DE Uncharacterized protein #=GS A0A1I7UDM3/61-263 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis tropicalis; #=GS A0A261C8E7/57-260 AC A0A261C8E7 #=GS A0A261C8E7/57-260 OS Caenorhabditis latens #=GS A0A261C8E7/57-260 DE Uncharacterized protein #=GS A0A261C8E7/57-260 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis latens; #=GS E3N189/61-264 AC E3N189 #=GS E3N189/61-264 OS Caenorhabditis remanei #=GS E3N189/61-264 DE CRE-LGC-27 protein #=GS E3N189/61-264 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis remanei; #=GS A0A2G5UWY6/54-258 AC A0A2G5UWY6 #=GS A0A2G5UWY6/54-258 OS Caenorhabditis nigoni #=GS A0A2G5UWY6/54-258 DE Uncharacterized protein #=GS A0A2G5UWY6/54-258 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis nigoni; #=GS A0A1I7UDM2/61-263 AC A0A1I7UDM2 #=GS A0A1I7UDM2/61-263 OS Caenorhabditis tropicalis #=GS A0A1I7UDM2/61-263 DE Uncharacterized protein #=GS A0A1I7UDM2/61-263 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis tropicalis; #=GS A8X5W0/79-229 AC A8X5W0 #=GS A8X5W0/79-229 OS Caenorhabditis briggsae #=GS A8X5W0/79-229 DE Protein CBR-LGC-32 #=GS A8X5W0/79-229 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis briggsae; #=GF SQ 13 H2KZY7/57-262 ADRMQDKSNALMMLPPTVAAGETLEVQVLDGSITEMWMNEVFKEMNINGFLKLSWKDRRLRWNPEEWKTEVLRLKSMGR-LWSPDI---NSDKLQTGSQSTDFVNYHDIQSNYNGNVTARLEFRMKAQCQIDYTEYPNDRKHCCFNLQSNLYKRYVRFIMEHE-GAHEMLNTKNTKTNWHIDPMYTWISKMNQENDNR-AERLEVCVGVVRK- Q8TA50/57-262 ADRMQDKSNALMMLPPTVAAGETLEVQVLDGSITEMWMNEVFKEMNINGFLKLSWKDRRLRWNPEEWKTEVLRLKSMGR-LWSPDI---NSDKLQTGSQSTDFVNYHDIQSNYNGNVTARLEFRMKAQCQIDYTEYPNDRKHCCFNLQSNLYKRYVRFIMEHE-GAHEMLNTKNTKTNWHIDPMYTWISKMNQENDNR-AERLEVCVGVVRK- Q22588/37-213 H-----------------SSGEI--VIKSNYKIAKWLYNSVAHELSTEGFFEMSWTNTTLDFTNLNACHKTVRIKSLLHIFWLPHVYFPFSYNLEESR------NLYNIEIHESGNITLSKRLKQSIPCKEQSDSHPFSNNTCTLSWKYTNLDNYQKIVIEPS-NLMDSVEREHSRQFILKDVTF----ESSGDDEQR------LHYTITQTP H3FAJ1/35-231 --------NALMLLPPTVAAGETLEVDVQKVVVRQMWMSEVFKEMHINGYVGLSWKDRRLRWDQIDWKTDTLNIKSFGR-LWVPDI---NSEKFQTSAQSVDYTNYQNIEARMTGNVTARLEFRMQAQCEIDYSDYPNDRKHCCFKLRSSLYKRYIKFFILPGQDGVSSLDVTPIRTNWHIENS--WVKKQEMDDDQK-AEELEICVTARRK- A0A2G5UWY2/16-215 ------KSNALMMLPPTVAAGETLEVQVLDGSITEMWMNEVFKEMNINGFLKLSWKDRRLRWNPEEWKTENLRLKSMGR-LWSPDI---NSDKLQTGAQSTDFVNYHDIQSNYNGNVTARLEFRMKAQCSIDYTEYPNDRKHCCFNLQSTLYKRYVKFIMEHG-DGHEMLDTKNIRTNWHVDPTWTWIMKLNQDNDNR-AERLEVCVGVVRK- A8XHS3/54-259 -DRMQDKSNALMMLPPTVAAGETLEVQVLDGSITEMWMNEVFKEMNINGFLKLSWKDRRLRWNPEEWKTENLRLKSMGR-LWSPDI---NSDKLQTGAQSTDFVNYHDIQSNYNGNVTARLEFRMKAQCSIDYTEYPNDRKHCCFNLQSTLYKRYVKFIMEHG-DGHEMLDTKNIRTNWHVDPTWTWIMKLNQDNDNRYPERLEVCVGVVRK- G0N789/52-255 --RMQDKSNALMMLPPTVAAGETLEVQVLDGSITEMWMNEVFKEMNINGYLKLSWKDRRLRWNPEEWKTENLRLKSMGR-LWSPDI---NSDKLQTGSQSTDFVNYHDIQSNYNGNVTARLEFRMKAQCVIDYTEYPNDRKHCCFNLQSTLYKRYVKFIMEHG-DGHEMLNTKDIRTNWHVDPTWTWIMKLNQENDNR-AERLEVCVGVVRK- A0A1I7UDM3/61-263 ---MQDKSNALMMLPPTVAAGETLEVQVLDGSITEMWMNEVFKEMNINGFLKLSWKDRRLRWNPEEWKTENLRLKSMGR-LWSPDI---NSDKLQTGSQSTDFVNYHDIQSNYNGNVTARLEFRMKAQCTIDYTEYPNDRKHCCFNLQSTLYKRYVKFIMEHG-DGHEMLDTKNIRTNWHIDPSWTWIMKLNQDNDNR-AERLEVCVGVVRK- A0A261C8E7/57-260 --RMQDKSNALMMLPPTVAAGETLEVQVLDGSITEMWMNEVFKEMNINGFLKLSWKDRRLRWNPEEWKTENLRLKSMGR-LWSPDI---NSDKLQTGSQSTDFVNYHDIQSNYNGNVTARLEFRMKAQCTIDYTEYPNDRKHCCFNLQSTLYKRYVKFIMEHG-DGHEMLNTKNIRTNWHVDPSWTWIMKLNQDNDNR-AERLEVCVGVVRK- E3N189/61-264 --RMQDKSNALMMLPPTVAAGETLEVQVLDGSITEMWMNEVFKEMNINGFLKLSWKDRRLRWNPEEWKTENLRLKSMGR-LWSPDI---NSDKLQTGSQSTDFVNYHDIQSNYNGNVTARLEFRMKAQCTIDYTEYPNDRKHCCFNLQSTLYKRYVKFIMEHG-DGHEMLNTKNIRTNWHVDPSWTWIMKLNQDNDNR-AERLEVCVGVVRK- A0A2G5UWY6/54-258 -DRMQDKSNALMMLPPTVAAGETLEVQVLDGSITEMWMNEVFKEMNINGFLKLSWKDRRLRWNPEEWKTENLRLKSMGR-LWSPDI---NSDKLQTGAQSTDFVNYHDIQSNYNGNVTARLEFRMKAQCSIDYTEYPNDRKHCCFNLQSTLYKRYVKFIMEHG-DGHEMLDTKNIRTNWHVDPTWTWIMKLNQDNDNR-AERLEVCVGVVRK- A0A1I7UDM2/61-263 ---MQDKSNALMMLPPTVAAGETLEVQVLDGSITEMWMNEVFKEMNINGFLKLSWKDRRLRWNPEEWKTENLRLKSMGR-LWSPDI---NSDKLQTGSQSTDFVNYHDIQSNYNGNVTARLEFRMKAQCTIDYTEYPNDRKHCCFNLQSTLYKRYVKFIMEHG-DGHEMLDTKNIRTNWHIDPSWTWIMKLNQDNDNR-AERLEVCVGVVRK- A8X5W0/79-229 --------------------------RKSTIQVLRVV---------------FNFKNDSLAFYHLNPCNPRIEISSDNTFFWKPDVFFIHSEEYEDDK------T-YRFFINENGSITASKRITRIMPCEVDDTKNPFSNATCTFSWKYTNLGSFDTISVETG-KLI--TKPKTKENLIMHDVNY----NSTSDDEFQ------INYHLSQH- #=GC scorecons 001111223333233333445543354444347454434353454344543356666449454435345446566944506939670004955565543323226364644636967965455543559356454594555595755556455573554574604333354454365444384432321534476736023233654454650 #=GC scorecons_70 ________________________________*____________________****__*______________**____**_***____*___*_________*___*_____*****_________*__*____*_____*_*____*____*_____*____________________*___________*_*_*____________*__ #=GC scorecons_80 ________________________________*__________________________*_______________*_____*_*______*_______________________*__*__________*_______*_____*_*_________*_____*____________________*___________*___________________ #=GC scorecons_90 ___________________________________________________________*_______________*_____*_*______*_______________________*__*__________*_______*_____*______________________________________*_______________________________ //