# STOCKHOLM 1.0
#=GF ID 2.60.260.20/FF/000033
#=GF DE DnaJ family protein
#=GF AC 2.60.260.20/FF/000033
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 77.838
#=GS Q38C15/250-354      AC Q38C15
#=GS Q38C15/250-354      OS Trypanosoma brucei brucei TREU927
#=GS Q38C15/250-354      DE Chaperone protein DNAJ, putative
#=GS Q38C15/250-354      DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Trypanosoma; Trypanozoon; Trypanosoma brucei; Trypanosoma brucei brucei; 
#=GS Q38C15/250-354      DR GO; GO:0005654; GO:0005730; GO:0005737; GO:0006457; GO:0036064; GO:0051082; GO:0051087; GO:0097014; 
#=GS Q585V4/252-332      AC Q585V4
#=GS Q585V4/252-332      OS Trypanosoma brucei brucei TREU927
#=GS Q585V4/252-332      DE Chaperone protein DnaJ, putative
#=GS Q585V4/252-332      DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Trypanosoma; Trypanozoon; Trypanosoma brucei; Trypanosoma brucei brucei; 
#=GS Q585V4/252-332      DR GO; GO:0005737; GO:0006457; GO:0009408; GO:0044877; GO:0051082; GO:0051087; 
#=GS Q4QCG6/256-337      AC Q4QCG6
#=GS Q4QCG6/256-337      OS Leishmania major
#=GS Q4QCG6/256-337      DE Putative DnaJ protein
#=GS Q4QCG6/256-337      DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leishmania; Leishmania; Leishmania major species complex; Leishmania major; 
#=GS Q4QCG6/256-337      DR GO; GO:0005654; GO:0005730; GO:0005737; GO:0036064; GO:0097014; 
#=GS E9ACW0/251-332      AC E9ACW0
#=GS E9ACW0/251-332      OS Leishmania major
#=GS E9ACW0/251-332      DE Putative heat shock protein DNAJ
#=GS E9ACW0/251-332      DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leishmania; Leishmania; Leishmania major species complex; Leishmania major; 
#=GS E9ACW0/251-332      DR GO; GO:0005737; 
#=GS B1N5Y5/256-335      AC B1N5Y5
#=GS B1N5Y5/256-335      OS Entamoeba histolytica
#=GS B1N5Y5/256-335      DE DNAJ homolog subfamily A member 2, putative
#=GS B1N5Y5/256-335      DR ORG; Eukaryota; Entamoebidae; Entamoeba; Entamoeba histolytica; 
#=GS A0A0A1U249/256-335  AC A0A0A1U249
#=GS A0A0A1U249/256-335  OS Entamoeba invadens IP1
#=GS A0A0A1U249/256-335  DE Uncharacterized protein
#=GS A0A0A1U249/256-335  DR ORG; Eukaryota; Entamoebidae; Entamoeba; Entamoeba invadens; 
#=GS K2HC38/257-337      AC K2HC38
#=GS K2HC38/257-337      OS Entamoeba nuttalli P19
#=GS K2HC38/257-337      DE DnaJ family protein
#=GS K2HC38/257-337      DR ORG; Eukaryota; Entamoebidae; Entamoeba; Entamoeba nuttalli; 
#=GS A0A1G4I745/250-354  AC A0A1G4I745
#=GS A0A1G4I745/250-354  OS Trypanosoma equiperdum
#=GS A0A1G4I745/250-354  DE Chaperone protein DNAj, putative
#=GS A0A1G4I745/250-354  DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Trypanosoma; Trypanozoon; Trypanosoma equiperdum; 
#=GS E9AIQ0/256-337      AC E9AIQ0
#=GS E9AIQ0/256-337      OS Leishmania braziliensis
#=GS E9AIQ0/256-337      DE Putative DnaJ protein
#=GS E9AIQ0/256-337      DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leishmania; Viannia; Leishmania braziliensis species complex; Leishmania braziliensis; 
#=GS E9BJG5/251-332      AC E9BJG5
#=GS E9BJG5/251-332      OS Leishmania donovani BPK282A1
#=GS E9BJG5/251-332      DE Heat shock protein DNAJ, putative
#=GS E9BJG5/251-332      DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leishmania; Leishmania; Leishmania donovani species complex; Leishmania donovani; 
#=GS E9AZE9/251-332      AC E9AZE9
#=GS E9AZE9/251-332      OS Leishmania mexicana MHOM/GT/2001/U1103
#=GS E9AZE9/251-332      DE Putative heat shock protein DNAJ
#=GS E9AZE9/251-332      DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leishmania; Leishmania; Leishmania mexicana species complex; Leishmania mexicana; 
#=GS A0A088RPZ6/256-337  AC A0A088RPZ6
#=GS A0A088RPZ6/256-337  OS Leishmania panamensis
#=GS A0A088RPZ6/256-337  DE DnaJ protein, putative
#=GS A0A088RPZ6/256-337  DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leishmania; Viannia; Leishmania guyanensis species complex; Leishmania panamensis; 
#=GS A4I341/251-332      AC A4I341
#=GS A4I341/251-332      OS Leishmania infantum
#=GS A4I341/251-332      DE Heat_shock_protein_DNAJ_-_putative
#=GS A4I341/251-332      DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leishmania; Leishmania; Leishmania donovani species complex; Leishmania infantum; 
#=GS A0A1E1IVS1/256-337  AC A0A1E1IVS1
#=GS A0A1E1IVS1/256-337  OS Leishmania guyanensis
#=GS A0A1E1IVS1/256-337  DE DnaJ protein, putative
#=GS A0A1E1IVS1/256-337  DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leishmania; Viannia; Leishmania guyanensis species complex; Leishmania guyanensis; 
#=GS C4M2K3/266-346      AC C4M2K3
#=GS C4M2K3/266-346      OS Entamoeba histolytica
#=GS C4M2K3/266-346      DE DnaJ family protein
#=GS C4M2K3/266-346      DR ORG; Eukaryota; Entamoebidae; Entamoeba; Entamoeba histolytica; 
#=GS M3UQR4/266-346      AC M3UQR4
#=GS M3UQR4/266-346      OS Entamoeba histolytica HM-1:IMSS-B
#=GS M3UQR4/266-346      DE DnaJ family protein
#=GS M3UQR4/266-346      DR ORG; Eukaryota; Entamoebidae; Entamoeba; Entamoeba histolytica; 
#=GS N9TIT9/266-346      AC N9TIT9
#=GS N9TIT9/266-346      OS Entamoeba histolytica HM-1:IMSS-A
#=GS N9TIT9/266-346      DE DnaJ family protein, putative
#=GS N9TIT9/266-346      DR ORG; Eukaryota; Entamoebidae; Entamoeba; Entamoeba histolytica; 
#=GS M7WIA2/263-343      AC M7WIA2
#=GS M7WIA2/263-343      OS Entamoeba histolytica HM-3:IMSS
#=GS M7WIA2/263-343      DE DnaJ family protein
#=GS M7WIA2/263-343      DR ORG; Eukaryota; Entamoebidae; Entamoeba; Entamoeba histolytica; 
#=GS M2S6K6/263-343      AC M2S6K6
#=GS M2S6K6/263-343      OS Entamoeba histolytica KU27
#=GS M2S6K6/263-343      DE DnaJ family protein
#=GS M2S6K6/263-343      DR ORG; Eukaryota; Entamoebidae; Entamoeba; Entamoeba histolytica; 
#=GS M7WA19/249-328      AC M7WA19
#=GS M7WA19/249-328      OS Entamoeba histolytica HM-3:IMSS
#=GS M7WA19/249-328      DE DnaJ family protein
#=GS M7WA19/249-328      DR ORG; Eukaryota; Entamoebidae; Entamoeba; Entamoeba histolytica; 
#=GS M2RV74/249-328      AC M2RV74
#=GS M2RV74/249-328      OS Entamoeba histolytica KU27
#=GS M2RV74/249-328      DE DnaJ family protein
#=GS M2RV74/249-328      DR ORG; Eukaryota; Entamoebidae; Entamoeba; Entamoeba histolytica; 
#=GS C4LSG9/249-328      AC C4LSG9
#=GS C4LSG9/249-328      OS Entamoeba histolytica
#=GS C4LSG9/249-328      DE DnaJ family protein
#=GS C4LSG9/249-328      DR ORG; Eukaryota; Entamoebidae; Entamoeba; Entamoeba histolytica; 
#=GS N9V3D5/249-328      AC N9V3D5
#=GS N9V3D5/249-328      OS Entamoeba histolytica HM-1:IMSS-A
#=GS N9V3D5/249-328      DE DnaJ family protein, putative
#=GS N9V3D5/249-328      DR ORG; Eukaryota; Entamoebidae; Entamoeba; Entamoeba histolytica; 
#=GS M3TG98/249-328      AC M3TG98
#=GS M3TG98/249-328      OS Entamoeba histolytica HM-1:IMSS-B
#=GS M3TG98/249-328      DE DnaJ family protein
#=GS M3TG98/249-328      DR ORG; Eukaryota; Entamoebidae; Entamoeba; Entamoeba histolytica; 
#=GS K2H8S1/249-329      AC K2H8S1
#=GS K2H8S1/249-329      OS Entamoeba nuttalli P19
#=GS K2H8S1/249-329      DE DnaJ family protein
#=GS K2H8S1/249-329      DR ORG; Eukaryota; Entamoebidae; Entamoeba; Entamoeba nuttalli; 
#=GS A0A3S7X139/251-332  AC A0A3S7X139
#=GS A0A3S7X139/251-332  OS Leishmania donovani
#=GS A0A3S7X139/251-332  DE Heat shock protein DNAJ, putative
#=GS A0A3S7X139/251-332  DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leishmania; Leishmania; Leishmania donovani species complex; Leishmania donovani; 
#=GS A0A3P3Z5Z5/256-337  AC A0A3P3Z5Z5
#=GS A0A3P3Z5Z5/256-337  OS Leishmania braziliensis MHOM/BR/75/M2904
#=GS A0A3P3Z5Z5/256-337  DE DnaJ_protein
#=GS A0A3P3Z5Z5/256-337  DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leishmania; Viannia; Leishmania braziliensis species complex; Leishmania braziliensis; 
#=GS A0A3S7WWC5/256-337  AC A0A3S7WWC5
#=GS A0A3S7WWC5/256-337  OS Leishmania donovani
#=GS A0A3S7WWC5/256-337  DE DnaJ protein, putative
#=GS A0A3S7WWC5/256-337  DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leishmania; Leishmania; Leishmania donovani species complex; Leishmania donovani; 
#=GS E9BF40/256-337      AC E9BF40
#=GS E9BF40/256-337      OS Leishmania donovani BPK282A1
#=GS E9BF40/256-337      DE DnaJ protein, putative
#=GS E9BF40/256-337      DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leishmania; Leishmania; Leishmania donovani species complex; Leishmania donovani; 
#=GS A4HZ48/256-337      AC A4HZ48
#=GS A4HZ48/256-337      OS Leishmania infantum
#=GS A4HZ48/256-337      DE DnaJ_protein_-_putative
#=GS A4HZ48/256-337      DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leishmania; Leishmania; Leishmania donovani species complex; Leishmania infantum; 
#=GF SQ 30
Q38C15/250-354              KPHDVFRRVGDHLIMNYRITLQEALCGFELPVQHLDKRMLLIKIPAGQVIDPEAGWVVHREGMPLPNTGGIERGNLIIHFEVEYPTKLSSRQIDLIADAFHVSEG
Q585V4/252-332              --HPVFTRKGDHLLIHHKISLAEALTGFTMNIKHLDERAISIRST--NVIDPQKLWSVSREGMPIPGTGGTERGDLVIKFDVVYP--------------------
Q4QCG6/256-337              ----VFHRINDHLMMRCSITLQEALCGFEVPIEHLDGRQLVIKASPGQVVHSDSAWSVYNEGMPVKGTGGLQKGKLFIYFDVEWPE-------------------
E9ACW0/251-332              ----TFIRKGDHLFLEQTISLAEALTGFSLNITQLDGRELAISSTAGTIIDPANMYSVSREGMPVAHTGGMERGDLIIRFQVVFPK-------------------
B1N5Y5/256-335              --HNVYTRKGNNLLVEKSVGLNEALTGFSFTLKQLDGRELFIESK--DIIDPESFMRVPGEGFPIKHQS--SHGDLYIYFTVKMPR-------------------
A0A0A1U249/256-335          --HNVYTRKGNNLLVEKSVGLNEALTGFSFTLKQLDGRELFIESK--DIIDPESFMRVPGEGFPIKHQS--SHGDLYIYFTVKMPR-------------------
K2HC38/257-337              --HPIFERKGSDLIMSKTITLNEALTGVAFIVKTLDGRELFIEGK--DVIEPKSYMCVIGEGFTIKHHPE-EHGDLYIYFEIKFPT-------------------
A0A1G4I745/250-354          KPHDVFRRVGDHLIMNYRITLQEALCGFELPVQHLDKRMLLIKIPAGQVIDPEAGWVVHREGMPLPNTGGIERGNLIIHFEVEYPTKLSSRQIDLIADAFHVSEG
E9AIQ0/256-337              ----VFHRINDHLMIRCPITLQEALCGFDVPIEHLDGRELIIKASPGQVVHGDSAWSVYNEGMPVKGTGGLQKGKLFVYFDVQWPE-------------------
E9BJG5/251-332              ----AFIRKGDHLFLEQTISLAEALTGFSLNITQLDGRELAISSTAGTIIDPANMYSVSREGMPVAHTGGMERGDLIIRFKVVFPK-------------------
E9AZE9/251-332              ----TFIRKGDHLFLEQTISLAEALTGFSLNITQLDGRELAVSSAAGAIIDPANMYSVSREGMPIAHTGGMERGDLIIRFQVVFPK-------------------
A0A088RPZ6/256-337          ----VFHRINDHLMIRCPITLQEALCGLDVPIEHLDGRELIIKASPGQVVHGDSAWSVYNEGMPVKGTGGLQKGKLFVYFDVQWPE-------------------
A4I341/251-332              ----AFIRKGDHLFLEQTISLAEALTGFSLNITQLDGRELAISSTAGTIIDPANMYSVSREGMPVAHTGGMERGDLIIRFKVVFPK-------------------
A0A1E1IVS1/256-337          ----VFHRINDHLMIRCPITLQEALCGFDVPIEHLDGRELIIKASPGQVVHGDSAWSVYNEGMPVKGTGGLQKGKLFVYFDVQWPE-------------------
C4M2K3/266-346              --HPIFERKGSDLIMSKTITLNEALTGVAFIVKTLDGRELFIEGK--DVIEPKSYMCVIGEGFTIKHHPE-EHGDLYIYFEIKFPN-------------------
M3UQR4/266-346              --HPIFERKGSDLIMSKTITLNEALTGVAFIVKTLDGRELFIEGK--DVIEPKSYMCVIGEGFTIKHHPE-EHGDLYIYFEIKFPN-------------------
N9TIT9/266-346              --HPIFERKGSDLIMSKTITLNEALTGVAFIVKTLDGRELFIEGK--DVIEPKSYMCVIGEGFTIKHHPE-EHGDLYIYFEIKFPN-------------------
M7WIA2/263-343              --HPIFERKGSDLIMSKTITLNEALTGVAFIVKTLDGRELFIEGK--DVIEPKSYMCVIGEGFTIKHHPE-EHGDLYIYFEIKFPT-------------------
M2S6K6/263-343              --HPIFERKGSDLIMSKTITLNEALTGVAFIVKTLDGRELFIEGK--DVIEPKSYMCVIGEGFTIKHHPE-EHGDLYIYFEIKFPT-------------------
M7WA19/249-328              --HRVFKRKGNDLVMDKKITLNEALTGIVFTLKQLDGRVLYVEGK--DIIQPNSYMKINDEGFTIKHHPE-MHGDLYIHFEVVLP--------------------
M2RV74/249-328              --HRVFKRKGNDLVMDKKITLNEALTGIVFTLKQLDGRVLYVEGK--DIIQPNSYMKINDEGFTIKHHPE-MHGDLYIHFEVVLP--------------------
C4LSG9/249-328              --HRVFKRKGNDLVMDKKITLNEALTGIVFTLKQLDGRVLYVEGK--DIIQPNSYMKINDEGFTIKHHPE-MHGDLYIHFEVVLP--------------------
N9V3D5/249-328              --HRVFKRKGNDLVMDKKITLNEALTGIVFTLKQLDGRVLYVEGK--DIIQPNSYMKINDEGFTIKHHPE-MHGDLYIHFEVVLP--------------------
M3TG98/249-328              --HRVFKRKGNDLVMDKKITLNEALTGIVFTLKQLDGRVLYVEGK--DIIQPNSYMKINDEGFTIKHHPE-MHGDLYIHFEVVLP--------------------
K2H8S1/249-329              --HRIFRRKGNDLIMDKKITLNEALTGIVFTVKQLDGRVLYVEGK--DIIQPNSYMKINDEGFTVKHHPE-MHGDLYIRFEVVLPS-------------------
A0A3S7X139/251-332          ----AFIRKGDHLFLEQTISLAEALTGFSLNITQLDGRELAISSTAGTIIDPANMYSVSREGMPVAHTGGMERGDLIIRFKVVFPK-------------------
A0A3P3Z5Z5/256-337          ----VFHRINDHLMIRCPITLQEALCGFDVPIEHLDGRELIIKASPGQVVHGDSAWSVYNEGMPVKGTGGLQKGKLFVYFDVQWPE-------------------
A0A3S7WWC5/256-337          ----VFHRINDHLMMRCPITLQEALCGFEVPIEHLDGRQLVIKASPGQVVHSDSAWSVYNEGMPVKGTGGLQKGKLFIYFDVEWPE-------------------
E9BF40/256-337              ----VFHRINDHLMMRCPITLQEALCGFEVPIEHLDGRQLVIKASPGQVVHSDSAWSVYNEGMPVKGTGGLQKGKLFIYFDVEWPE-------------------
A4HZ48/256-337              ----VFHRINDHLMMRCPITLQEALCGFEVPIEHLDGRQLVIKASPGQVVHSDSAWSVYNEGMPVKGTGGLQKGKLFIYFDVEWPE-------------------
#=GC scorecons              002168395655956444869499959535464599794837544124775646344734995665555514596958595744920000000000000000000
#=GC scorecons_70           _____*_*_*__*_*___***_***_*_______****_*_*______**_*_____*__**_**________*_*_*_*_*__*____________________
#=GC scorecons_80           _____*_*____*_____*_*_***_*_______****_*_*_______*_______*__**___________*_*_*_*_*__*____________________
#=GC scorecons_90           _____*_*____*_____*_*_***_*_______**_*_*____________________**___________*_*_*_*____*____________________
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