# STOCKHOLM 1.0
#=GF ID 2.60.120.1030/FF/000005
#=GF DE mRNA cleavage and polyadenylation factor CLP1
#=GF AC 2.60.120.1030/FF/000005
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 76.623
#=GS Q7SAB7/12-98      AC Q7SAB7
#=GS Q7SAB7/12-98      OS Neurospora crassa OR74A
#=GS Q7SAB7/12-98      DE mRNA cleavage and polyadenylation factor clp1
#=GS Q7SAB7/12-98      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes; Sordariomycetidae; Sordariales; Sordariaceae; Neurospora; Neurospora crassa; 
#=GS Q54N48/42-118     AC Q54N48
#=GS Q54N48/42-118     OS Dictyostelium discoideum
#=GS Q54N48/42-118     DE Protein CLP1 homolog
#=GS Q54N48/42-118     DR ORG; Eukaryota; Dictyosteliales; Dictyosteliaceae; Dictyostelium; Dictyostelium discoideum; 
#=GS F0ZA95/7-82       AC F0ZA95
#=GS F0ZA95/7-82       OS Dictyostelium purpureum
#=GS F0ZA95/7-82       DE Protein CLP1 homolog
#=GS F0ZA95/7-82       DR ORG; Eukaryota; Dictyosteliales; Dictyosteliaceae; Dictyostelium; Dictyostelium purpureum; 
#=GS Q6BZT5/15-88      AC Q6BZT5
#=GS Q6BZT5/15-88      OS Yarrowia lipolytica CLIB122
#=GS Q6BZT5/15-88      DE mRNA cleavage and polyadenylation factor CLP1
#=GS Q6BZT5/15-88      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Dipodascaceae; Yarrowia; Yarrowia lipolytica; 
#=GS F7VNT4/12-98      AC F7VNT4
#=GS F7VNT4/12-98      OS Sordaria macrospora k-hell
#=GS F7VNT4/12-98      DE mRNA cleavage and polyadenylation factor CLP1
#=GS F7VNT4/12-98      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes; Sordariomycetidae; Sordariales; Sordariaceae; Sordaria; Sordaria macrospora; 
#=GS F8MFL0/12-98      AC F8MFL0
#=GS F8MFL0/12-98      OS Neurospora tetrasperma FGSC 2508
#=GS F8MFL0/12-98      DE mRNA cleavage and polyadenylation factor CLP1
#=GS F8MFL0/12-98      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes; Sordariomycetidae; Sordariales; Sordariaceae; Neurospora; Neurospora tetrasperma; 
#=GS A0A0B0DSS8/12-98  AC A0A0B0DSS8
#=GS A0A0B0DSS8/12-98  OS Neurospora crassa
#=GS A0A0B0DSS8/12-98  DE mRNA cleavage and polyadenylation factor CLP1
#=GS A0A0B0DSS8/12-98  DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes; Sordariomycetidae; Sordariales; Sordariaceae; Neurospora; Neurospora crassa; 
#=GS G4UJS4/12-98      AC G4UJS4
#=GS G4UJS4/12-98      OS Neurospora tetrasperma FGSC 2509
#=GS G4UJS4/12-98      DE Uncharacterized protein
#=GS G4UJS4/12-98      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes; Sordariomycetidae; Sordariales; Sordariaceae; Neurospora; Neurospora tetrasperma; 
#=GS A0A1D8NQM1/15-88  AC A0A1D8NQM1
#=GS A0A1D8NQM1/15-88  OS Yarrowia lipolytica
#=GS A0A1D8NQM1/15-88  DE mRNA cleavage and polyadenylation factor CLP1
#=GS A0A1D8NQM1/15-88  DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Dipodascaceae; Yarrowia; Yarrowia lipolytica; 
#=GF SQ 9
Q7SAB7/12-98              QAPTTTQRTINLRPFGEWRFSIPHQHSTFSSNSSAAGVTVRLVAGTAERDGTELAPNCVYTFLPGTKSKLFTDQGCTLEINNTGGYP-----
Q54N48/42-118             ---INQSTIRTLEITQELRYEIDFDQNGW----------MKLIEGTAECFGTELSLNKVYK-LSGTKGAVFTWTGCKIEITNNCQ-PYIGEK
F0ZA95/7-82               ---INESSTKTLEKHQELRYEIEFDQQGW----------MRLVEGTAECFGTELLLNKIYK-LTSTKGAVFTWTGCKIEITNNCS-PYIGD-
Q6BZT5/15-88              T--TESTHTIDLKPETEWRYEVAIGGTLH----------VTLKSGTAEIFGTELPPNKELS-IQG-KGSIYTWQGCQFVYTAIAG-P---KG
F7VNT4/12-98              QAPTSTQRTINLRPFGEWRFSIPHQHSTFSSNSSAAGVTVRLVAGTAERDGTELTPHKDYTFLPGTKSKLFTDQGCTLEINNTGGYP-----
F8MFL0/12-98              QAPTTTQRTINLRPFGEWRFSIPHQHSTFSSNSSAAGVTVRLAAGTAERDGTELAPNCVYTFLPGTKSKLFTDQGCTLEINNTGGYP-----
A0A0B0DSS8/12-98          QAPTTTQRTINLRPFGEWRFSIPHQHSTFSSNSSAAGVTVRLVAGTAERDGTELAPNCVYTFLPGTKSKLFTDQGCTLEINNTGGYP-----
G4UJS4/12-98              QAPTTTQRTINLRPFGEWRFSIPHQHSTFSSNSSAAGVTVRLAAGTAERDGTELAPNCVYTFLPGTKSKLFTDQGCTLEINNTGGYP-----
A0A1D8NQM1/15-88          T--TESTHTIDLKPETEWRYEVAIGGTLH----------VTLKSGTAEIFGTELPPNKELS-IQG-KGSIYTWQGCQFVYTAIAG-P---KG
#=GC scorecons            21164444754955349597574444434111111111165934999934999946854541647496457945994555664451900010
#=GC scorecons_70         ___*____*__*____*_**_*_________________*_*__****__****__*_____*_*_*___**__**__________*_____
#=GC scorecons_80         ________*__*____*_**_*___________________*__****__****__*_______*_*___**__**__________*_____
#=GC scorecons_90         ___________*____*_*______________________*__****__****____________*____*__**__________*_____
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