# STOCKHOLM 1.0
#=GF ID 2.40.30.60/FF/000002
#=GF DE 16S rRNA processing protein RimM family
#=GF AC 2.40.30.60/FF/000002
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 68.676
#=GS Q9FHG3/79-173      AC Q9FHG3
#=GS Q9FHG3/79-173      OS Arabidopsis thaliana
#=GS Q9FHG3/79-173      DE 16S rRNA processing protein RimM family
#=GS Q9FHG3/79-173      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana; 
#=GS Q9FHG3/79-173      DR GO; GO:0009507; 
#=GS D7TJY9/68-170      AC D7TJY9
#=GS D7TJY9/68-170      OS Vitis vinifera
#=GS D7TJY9/68-170      DE Uncharacterized protein
#=GS D7TJY9/68-170      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Vitales; Vitaceae; Viteae; Vitis; Vitis vinifera; 
#=GS A0A3B5Y698/82-180  AC A0A3B5Y698
#=GS A0A3B5Y698/82-180  OS Triticum aestivum
#=GS A0A3B5Y698/82-180  DE Uncharacterized protein
#=GS A0A3B5Y698/82-180  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Pooideae; Triticeae; Triticinae; Triticum; Triticum aestivum; 
#=GS I1K454/84-177      AC I1K454
#=GS I1K454/84-177      OS Glycine max
#=GS I1K454/84-177      DE Uncharacterized protein
#=GS I1K454/84-177      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja; Glycine max; 
#=GS A0A0D3D9H5/81-175  AC A0A0D3D9H5
#=GS A0A0D3D9H5/81-175  OS Brassica oleracea var. oleracea
#=GS A0A0D3D9H5/81-175  DE Uncharacterized protein
#=GS A0A0D3D9H5/81-175  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Brassiceae; Brassica; Brassica oleracea; Brassica oleracea var. oleracea; 
#=GS V4L804/80-174      AC V4L804
#=GS V4L804/80-174      OS Eutrema salsugineum
#=GS V4L804/80-174      DE Uncharacterized protein
#=GS V4L804/80-174      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Eutremeae; Eutrema; Eutrema salsugineum; 
#=GS A0A087GNL5/76-170  AC A0A087GNL5
#=GS A0A087GNL5/76-170  OS Arabis alpina
#=GS A0A087GNL5/76-170  DE Uncharacterized protein
#=GS A0A087GNL5/76-170  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Arabideae; Arabis; Arabis alpina; 
#=GS A0A1J3CT20/99-193  AC A0A1J3CT20
#=GS A0A1J3CT20/99-193  OS Noccaea caerulescens
#=GS A0A1J3CT20/99-193  DE Ribosome maturation factor RimM
#=GS A0A1J3CT20/99-193  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Coluteocarpeae; Noccaea; Noccaea caerulescens; 
#=GS R0F023/79-173      AC R0F023
#=GS R0F023/79-173      OS Capsella rubella
#=GS R0F023/79-173      DE Uncharacterized protein
#=GS R0F023/79-173      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Capsella; Capsella rubella; 
#=GS D7MRX0/80-174      AC D7MRX0
#=GS D7MRX0/80-174      OS Arabidopsis lyrata subsp. lyrata
#=GS D7MRX0/80-174      DE 16S rRNA processing protein RimM family
#=GS D7MRX0/80-174      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis lyrata; Arabidopsis lyrata subsp. lyrata; 
#=GS A0A078H4C2/82-176  AC A0A078H4C2
#=GS A0A078H4C2/82-176  OS Brassica napus
#=GS A0A078H4C2/82-176  DE BnaA06g35980D protein
#=GS A0A078H4C2/82-176  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Brassiceae; Brassica; Brassica napus; 
#=GS M4E8B1/82-176      AC M4E8B1
#=GS M4E8B1/82-176      OS Brassica rapa subsp. pekinensis
#=GS M4E8B1/82-176      DE Uncharacterized protein
#=GS M4E8B1/82-176      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Brassiceae; Brassica; Brassica rapa; Brassica rapa subsp. pekinensis; 
#=GS A0A1S3UW01/84-177  AC A0A1S3UW01
#=GS A0A1S3UW01/84-177  OS Vigna radiata var. radiata
#=GS A0A1S3UW01/84-177  DE uncharacterized protein LOC106769157
#=GS A0A1S3UW01/84-177  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna; Vigna radiata; Vigna radiata var. radiata; 
#=GS I1HGC7/86-185      AC I1HGC7
#=GS I1HGC7/86-185      OS Brachypodium distachyon
#=GS I1HGC7/86-185      DE Uncharacterized protein
#=GS I1HGC7/86-185      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Pooideae; Brachypodieae; Brachypodium; Brachypodium distachyon; 
#=GS A0A0L9TJU2/90-183  AC A0A0L9TJU2
#=GS A0A0L9TJU2/90-183  OS Vigna angularis
#=GS A0A0L9TJU2/90-183  DE Uncharacterized protein
#=GS A0A0L9TJU2/90-183  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna; Vigna angularis; 
#=GS A0A0S3QYY8/90-183  AC A0A0S3QYY8
#=GS A0A0S3QYY8/90-183  OS Vigna angularis var. angularis
#=GS A0A0S3QYY8/90-183  DE Uncharacterized protein
#=GS A0A0S3QYY8/90-183  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna; Vigna angularis; Vigna angularis var. angularis; 
#=GS A0A0Q3FZT8/86-185  AC A0A0Q3FZT8
#=GS A0A0Q3FZT8/86-185  OS Brachypodium distachyon
#=GS A0A0Q3FZT8/86-185  DE Uncharacterized protein
#=GS A0A0Q3FZT8/86-185  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Pooideae; Brachypodieae; Brachypodium; Brachypodium distachyon; 
#=GS A0A0Q3FZS6/86-185  AC A0A0Q3FZS6
#=GS A0A0Q3FZS6/86-185  OS Brachypodium distachyon
#=GS A0A0Q3FZS6/86-185  DE Uncharacterized protein
#=GS A0A0Q3FZS6/86-185  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Pooideae; Brachypodieae; Brachypodium; Brachypodium distachyon; 
#=GS A0A3B5Y6A4/82-180  AC A0A3B5Y6A4
#=GS A0A3B5Y6A4/82-180  OS Triticum aestivum
#=GS A0A3B5Y6A4/82-180  DE Uncharacterized protein
#=GS A0A3B5Y6A4/82-180  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Pooideae; Triticeae; Triticinae; Triticum; Triticum aestivum; 
#=GS A0A0R0K2B2/84-177  AC A0A0R0K2B2
#=GS A0A0R0K2B2/84-177  OS Glycine max
#=GS A0A0R0K2B2/84-177  DE Uncharacterized protein
#=GS A0A0R0K2B2/84-177  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja; Glycine max; 
#=GS I1KSK3/79-172      AC I1KSK3
#=GS I1KSK3/79-172      OS Glycine max
#=GS I1KSK3/79-172      DE Uncharacterized protein
#=GS I1KSK3/79-172      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja; Glycine max; 
#=GF SQ 21
Q9FHG3/79-173              ---------DLVEVGFLSGVHGLQGEICIKPNTDFPDLRFSKPGRRWLKQQLLGQDKIDEVELVEGRPHPAQKSWILKFRGLDDVDQVRQLVGATLLAEDDDRP
D7TJY9/68-170              -LETSKVESEFVEVGYISSVHGLQGEIRVKPNTDFPELRFAEPGIRWLRQQFSGKETIREVELVEGRGHPGQKTWILKFGGIDTVEEAKQLVGSSLLVREDDRP
A0A3B5Y698/82-180          -VE----EDDLVEVGYVSGAHGVRGDVLVSPRTDFPELRFATPGKRWLRARAAGKMQVREFELVRGKAHTGKKGWIVRFDGVDSLDEARQIVGSAVLVKTEDRP
I1K454/84-177              ----------FVNIGYISSVHGIQGEIRVKPATDFPRLRFSTPGRRWLKSKVLGGESVQEVELEEGREHPALKSWILKFRGIDTVEQAKMLIGATLLVTDEDRP
A0A0D3D9H5/81-175          ---------DLVEVGFLSGVHGLQGEICIKPNTDFPDLRFSKPGRRWLKQQLMGQDKIDEVELVEGRPHPAQKSWILKFRGLDDVDQVRQLVGATLLAEEDDRP
V4L804/80-174              ---------DLVEVGFLSGVHGLQGEICIKPNTDFPDLRFSKPGRRWLKQQLMGQDKIEEVELVEGRPHPAQKSWILKFRGLDDVDQVRQLIGATLLAEEDDRP
A0A087GNL5/76-170          ---------DLVEVGFLSGVHGLQGEICIKPNTDFPDLRFSKPGRRWLRQQLMGQEKIDEVELVEGRPHPAQKSWILKFRGLDNVDQVRQLVGATLLAEEHDRP
A0A1J3CT20/99-193          ---------DLVEVGFLSGVHGLQGEICIKPNTDFPDLRFSKPGRRWLKQQLMGQEKIEEVELVEGRPHPAHKSWILKFRGLDDVDQVRQLVGATLLAEEDDRP
R0F023/79-173              ---------DLVEVGFLSGVHGLQGEICIKPNTDFPDLRFSKPGRRWLKQQLMGQDKIDEVELVEGRPHPAQKSWILKFQGLDDVDQVRQLVGATLLAEEEDRP
D7MRX0/80-174              ---------DLVEVGFLSGVHGLQGEICIKPNTDFPDLRFSKPGRRWLKQQLMGQEKIDEVELVEGRPHPAQKSWILKFRGLDDVDQVRQLVGATLLAEDDDRP
A0A078H4C2/82-176          ---------DLVEVGFLSGVHGLQGEICIKPNTDFPDLRFSKPGRRWLKQQLMGQDKIDEVELVEGRPHPAQKSWILKFRGLDDVDQVRQLVGATLLAEEDDRP
M4E8B1/82-176              ---------DLVEVGFLSGVHGLQGEICIKPNTDFPDLRFSKPGRRWLKQQLMGQDKIDEVELVEGRPHPAQKSWILKFRGLDDVDQVRQLVGATLLAEEDDRP
A0A1S3UW01/84-177          ----------FVNIGYISSVHGIQGEIRVKPATDFPELRFATPGRRWLKSKVLGGQSIQEVELEEGREHPGLKSWILKFRGIDTVEQAKMLIGSTLLVTKEDRP
I1HGC7/86-185              LMD----EEDMVEVGYVSGAHGVRGDVLVSPRTDFPQLRFATPGKRWLRARAAGKMQVREFDLVRGKAHTGKKAWIVRFDGVDSLDEARQIVGSAILVKSEDRP
A0A0L9TJU2/90-183          ----------FVNIGYISSVHGIQGEIRVKPATDFPELRFATPGRRWLKSKVLGGQSIQEVELEEGREHPGLKSWILKFRGIDTVEQAKMLIGSTLLVTKEDRP
A0A0S3QYY8/90-183          ----------FVNIGYISSVHGIQGEIRVKPATDFPELRFATPGRRWLKSKVLGGQSIQEVELEEGREHPGLKSWILKFRGIDTVEQAKMLIGSTLLVTKEDRP
A0A0Q3FZT8/86-185          LMD----EEDMVEVGYVSGAHGVRGDVLVSPRTDFPQLRFATPGKRWLRARAAGKMQVREFDLVRGKAHTGKKAWIVRFDGVDSLDEARQIVGSAILVKSEDRP
A0A0Q3FZS6/86-185          LMD----EEDMVEVGYVSGAHGVRGDVLVSPRTDFPQLRFATPGKRWLRARAAGKMQVREFDLVRGKAHTGKKAWIVRFDGVDSLDEARQIVGSAILVKSEDRP
A0A3B5Y6A4/82-180          -VE----EDDLVEVGYVSGAHGVRGDVLVSPRTDFPELRFATPGKRWLRARAAGKMQVREFELVRGKAHTGKKGWIVRFDGVDSLDEARQIVGSAVLVKTEDRP
A0A0R0K2B2/84-177          ----------FVNIGYISSVHGIQGEIRVKPATDFPRLRFSTPGRRWLKSKVLGGESVQEVELEEGREHPALKSWILKFRGIDTVEQAKMLIGATLLVTDEDRP
I1KSK3/79-172              ----------FVNIGYISSVHGIQGEIRVKPATDFPQLRFSTPGRRWLKSKVLGRESVQEVELEEGREHPALKSWILKFRGIDTVDQAKKLIGATLLVVDEDRP
#=GC scorecons             00000001045967975966995697737694999959996599699974544944474967956974966495996795959467667567966696446999
#=GC scorecons_70          ___________*****_*****_****_*_*_****_***__*******____*___*_****_***_**__*_*****_*_*_*****_***_****__****
#=GC scorecons_80          ___________*_***_*__**__***_*_*_****_***__**_***_____*_____*_**__**_*___*_**_**_*_*__*__*__**___*____***
#=GC scorecons_90          ___________*__*__*__**__*_____*_****_***__**_***_____*_____*__*__*__*___*_**__*_*_*_________*___*____***
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