# STOCKHOLM 1.0
#=GF ID 2.40.30.330/FF/000004
#=GF DE mRNA cleavage and polyadenylation factor CLP1
#=GF AC 2.40.30.330/FF/000004
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 17.737
#=GS Q4P9Z3/498-629      AC Q4P9Z3
#=GS Q4P9Z3/498-629      OS Ustilago maydis 521
#=GS Q4P9Z3/498-629      DE mRNA cleavage and polyadenylation factor CLP1
#=GS Q4P9Z3/498-629      DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Ustilaginomycotina; Ustilaginomycetes; Ustilaginales; Ustilaginaceae; Ustilago; Ustilago maydis; 
#=GS A0A317XZX7/496-627  AC A0A317XZX7
#=GS A0A317XZX7/496-627  OS Testicularia cyperi
#=GS A0A317XZX7/496-627  DE mRNA cleavage and polyadenylation factor CLP1
#=GS A0A317XZX7/496-627  DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Ustilaginomycotina; Ustilaginomycetes; Ustilaginales; Anthracoideaceae; Testicularia; Testicularia cyperi; 
#=GS A0A2N8UEY0/496-627  AC A0A2N8UEY0
#=GS A0A2N8UEY0/496-627  OS Sporisorium reilianum f. sp. reilianum
#=GS A0A2N8UEY0/496-627  DE mRNA cleavage and polyadenylation factor CLP1
#=GS A0A2N8UEY0/496-627  DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Ustilaginomycotina; Ustilaginomycetes; Ustilaginales; Ustilaginaceae; Sporisorium; Sporisorium reilianum; 
#=GS M9M5S3/513-641      AC M9M5S3
#=GS M9M5S3/513-641      OS Moesziomyces antarcticus T-34
#=GS M9M5S3/513-641      DE mRNA cleavage and polyadenylation factor CLP1
#=GS M9M5S3/513-641      DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Ustilaginomycotina; Ustilaginomycetes; Ustilaginales; Ustilaginaceae; Moesziomyces; Moesziomyces antarcticus; 
#=GS R9P8E7/497-628      AC R9P8E7
#=GS R9P8E7/497-628      OS Pseudozyma hubeiensis SY62
#=GS R9P8E7/497-628      DE mRNA cleavage and polyadenylation factor CLP1
#=GS R9P8E7/497-628      DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Ustilaginomycotina; Ustilaginomycetes; Ustilaginales; Ustilaginaceae; Pseudozyma; Pseudozyma hubeiensis; 
#=GS V5E561/473-604      AC V5E561
#=GS V5E561/473-604      OS Kalmanozyma brasiliensis GHG001
#=GS V5E561/473-604      DE mRNA cleavage and polyadenylation factor CLP1
#=GS V5E561/473-604      DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Ustilaginomycotina; Ustilaginomycetes; Ustilaginales; Ustilaginaceae; Kalmanozyma; Kalmanozyma brasiliensis; 
#=GS I2G0H3/503-634      AC I2G0H3
#=GS I2G0H3/503-634      OS Ustilago hordei Uh4857-4
#=GS I2G0H3/503-634      DE mRNA cleavage and polyadenylation factor CLP1
#=GS I2G0H3/503-634      DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Ustilaginomycotina; Ustilaginomycetes; Ustilaginales; Ustilaginaceae; Ustilago; Ustilago hordei; 
#=GS W3VK17/845-972      AC W3VK17
#=GS W3VK17/845-972      OS Moesziomyces aphidis DSM 70725
#=GS W3VK17/845-972      DE mRNA cleavage and polyadenylation factor CLP1
#=GS W3VK17/845-972      DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Ustilaginomycotina; Ustilaginomycetes; Ustilaginales; Ustilaginaceae; Moesziomyces; Moesziomyces aphidis; 
#=GS A0A1K0G465/502-633  AC A0A1K0G465
#=GS A0A1K0G465/502-633  OS Ustilago bromivora
#=GS A0A1K0G465/502-633  DE mRNA cleavage and polyadenylation factor CLP1
#=GS A0A1K0G465/502-633  DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Ustilaginomycotina; Ustilaginomycetes; Ustilaginales; Ustilaginaceae; Ustilago; Ustilago bromivora; 
#=GS E7A1W5/496-627      AC E7A1W5
#=GS E7A1W5/496-627      OS Sporisorium reilianum SRZ2
#=GS E7A1W5/496-627      DE mRNA cleavage and polyadenylation factor CLP1
#=GS E7A1W5/496-627      DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Ustilaginomycotina; Ustilaginomycetes; Ustilaginales; Ustilaginaceae; Sporisorium; Sporisorium reilianum; 
#=GS A0A081CP05/494-621  AC A0A081CP05
#=GS A0A081CP05/494-621  OS Moesziomyces antarcticus
#=GS A0A081CP05/494-621  DE mRNA cleavage and polyadenylation factor CLP1
#=GS A0A081CP05/494-621  DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Ustilaginomycotina; Ustilaginomycetes; Ustilaginales; Ustilaginaceae; Moesziomyces; Moesziomyces antarcticus; 
#=GF SQ 11
Q4P9Z3/498-629              PYSTTIPFDLLEIYKVGQESLAPSSALPIGASRTVTETQLVKLDPTNSAADQTSLLHSVLALIQPPRGGGGAGQPDSSTNPTDDEIIGAPILGFVHVADIDTVRKKITVLSPSAGRLPSKTAIIGSLDWQDV
A0A317XZX7/496-627          PYSTTIPFDLLEVYRVGQESLAPSSALPIGASRTVTETQLVKLDPANSTADQTSLLHSILALIQPPRGGGGAGQPDSSTNPTDDEIIGAPILGFVHVADIDTVRKKITLLSPSTGRLPSKTAILGSLDWQDV
A0A2N8UEY0/496-627          PYSTTIPFDLLEIYRVGQESLAPSSALPIGASRTVTETQLVKMDPTNSAADQTSLLHSVLALIQPPRGGGGAGQPDSSTNPTDDEIIGAPILGFVHVADIDTVRKKITVLSPSTGRLPSKTAILGTLDWQDV
M9M5S3/513-641              PYSTTIPFDLLEIYKIGQESLAPSSALPIGASRTVTETQLVKLDPTNSAADQTSLLHSVLALIQPPRGGGGAGQPDSSTNPTDDEIIGAPILGFVHVADIDTVRKKITVLSPSAGRLPSKTAIIGLLC---S
R9P8E7/497-628              PYSTTIPFDLLEIYKIGQESLAPSSALPIGASRTITETQLVKLDPTNSAADQTSLLHSVLALIQPPRGGGGAGQPDSSTNPTDDEIIGAPILGFVHVADIDTVRKKITVLSPSAGRLPSKTAIIGSLDWQDV
V5E561/473-604              PYSTTIPFDLLEIYKVGQESLAPSSALPIGASRTVTETQLVKMDPTNSAADQTSLLHSVLALIQPPRGGGGAGQPDSSTNPTDDEIIGAPILGFVHVADIDTVRKKITVLSPSTGRLPSKTAILGALDWQDV
I2G0H3/503-634              PYSTTIPFDLLEIYKVGQESLAPSSALPIGASRTVTETQLVKLDPTNSAADQTSLLHSVLALIQPPRGGGGAGQPDSSSNPTDDEIIGAPILGFVHVADIDTMRKKITLLSPSTGRLPSKTAILGSLDWQDV
W3VK17/845-972              PYSTTIPFDLLEIYKIGQESLAPSSALPIGASRTVTETQLVKLDPTNSAADQTSLLHSVLALIQPPRGGGGAGQPDSSTNPTDDEIIGAPILGFVHVADIDTVRKKITVLSPSAGRLPSKTAIIGIVP----
A0A1K0G465/502-633          PYSTTIPFDLLEIYKVGQESLAPSSALPIGASRTVTETQLVKLDPTNSAADQTSLLHSVLALIQPPRGGGGAGQPDSSSNPTDDEIIGAPILGFVHVANIDTVRKKITLLSPSTGRLPSKTAILGSLDWQDV
E7A1W5/496-627              PYSTTIPFDLLEIYRVGQESLAPSSALPIGASRTVTETQLVKMDPTNSAADQTSLLHSVLALIQPPRGGGGAGQPDSSTNPTDDEIIGAPILGFVHVADIDTVRKKITVLSPSTGRLPSKTAILGTLDWQDV
A0A081CP05/494-621          PYSTTIPFDLLEIYKIGQESLAPSSALPIGASRTVTETQLVKLDPTNSAADQTSLLHSVLALIQPPRGGGGAGQPDSSTNPTDDEIIGAPILGFVHVADIDTVRKKITVLSPSAGRLPSKTAIIGLRE----
#=GC scorecons              999999999999897799999999999999999989999999799899899999999989999999999999999999799999999999999999998999899999699996999999999693653333
#=GC scorecons_70           *****************************************************************************************************************************_______
#=GC scorecons_80           ***************_********************************************************************************************_****_*********_*_______
#=GC scorecons_90           **************__**************************_**_**_*****************************_*****************************_****_*********_*_______
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