# STOCKHOLM 1.0
#=GF ID 2.30.30.100/FF/000072
#=GF DE RNA-binding protein Hfq
#=GF AC 2.30.30.100/FF/000072
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 1.596
#=GS 1kq2M00/1-77     AC A0A0H3JV59
#=GS 1kq2M00/1-77     OS Staphylococcus aureus subsp. aureus Mu50
#=GS 1kq2M00/1-77     DE RNA-binding protein Hfq
#=GS 1kq2M00/1-77     DR CATH; 1kq2; M:6-66; 
#=GS 1kq2M00/1-77     DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcaceae; Staphylococcus; Staphylococcus aureus; Staphylococcus aureus subsp. aureus; 
#=GS Q2FYZ1/1-77      AC Q2FYZ1
#=GS Q2FYZ1/1-77      OS Staphylococcus aureus subsp. aureus NCTC 8325
#=GS Q2FYZ1/1-77      DE RNA-binding protein Hfq
#=GS Q2FYZ1/1-77      DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcaceae; Staphylococcus; Staphylococcus aureus; Staphylococcus aureus subsp. aureus; 
#=GS A0A0H3JKV2/1-77  AC A0A0H3JKV2
#=GS A0A0H3JKV2/1-77  OS Staphylococcus aureus subsp. aureus N315
#=GS A0A0H3JKV2/1-77  DE RNA-binding protein Hfq
#=GS A0A0H3JKV2/1-77  DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcaceae; Staphylococcus; Staphylococcus aureus; Staphylococcus aureus subsp. aureus; 
#=GS 1kq2K00/1-77     AC A0A0H3JV59
#=GS 1kq2K00/1-77     OS Staphylococcus aureus subsp. aureus Mu50
#=GS 1kq2K00/1-77     DE RNA-binding protein Hfq
#=GS 1kq2K00/1-77     DR CATH; 1kq2; K:6-66; 
#=GS 1kq2K00/1-77     DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcaceae; Staphylococcus; Staphylococcus aureus; Staphylococcus aureus subsp. aureus; 
#=GS 1kq2I00/1-77     AC A0A0H3JV59
#=GS 1kq2I00/1-77     OS Staphylococcus aureus subsp. aureus Mu50
#=GS 1kq2I00/1-77     DE RNA-binding protein Hfq
#=GS 1kq2I00/1-77     DR CATH; 1kq2; I:6-65; 
#=GS 1kq2I00/1-77     DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcaceae; Staphylococcus; Staphylococcus aureus; Staphylococcus aureus subsp. aureus; 
#=GS 1kq2H00/1-77     AC A0A0H3JV59
#=GS 1kq2H00/1-77     OS Staphylococcus aureus subsp. aureus Mu50
#=GS 1kq2H00/1-77     DE RNA-binding protein Hfq
#=GS 1kq2H00/1-77     DR CATH; 1kq2; H:5-66; 
#=GS 1kq2H00/1-77     DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcaceae; Staphylococcus; Staphylococcus aureus; Staphylococcus aureus subsp. aureus; 
#=GS 1kq2B00/1-77     AC A0A0H3JV59
#=GS 1kq2B00/1-77     OS Staphylococcus aureus subsp. aureus Mu50
#=GS 1kq2B00/1-77     DE RNA-binding protein Hfq
#=GS 1kq2B00/1-77     DR CATH; 1kq2; B:6-66; 
#=GS 1kq2B00/1-77     DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcaceae; Staphylococcus; Staphylococcus aureus; Staphylococcus aureus subsp. aureus; 
#=GS 1kq2A00/1-77     AC A0A0H3JV59
#=GS 1kq2A00/1-77     OS Staphylococcus aureus subsp. aureus Mu50
#=GS 1kq2A00/1-77     DE RNA-binding protein Hfq
#=GS 1kq2A00/1-77     DR CATH; 1kq2; A:6-65; 
#=GS 1kq2A00/1-77     DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcaceae; Staphylococcus; Staphylococcus aureus; Staphylococcus aureus subsp. aureus; 
#=GS 1kq1Y00/1-77     AC A0A0H3JV59
#=GS 1kq1Y00/1-77     OS Staphylococcus aureus subsp. aureus Mu50
#=GS 1kq1Y00/1-77     DE RNA-binding protein Hfq
#=GS 1kq1Y00/1-77     DR CATH; 1kq1; Y:6-65; 
#=GS 1kq1Y00/1-77     DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcaceae; Staphylococcus; Staphylococcus aureus; Staphylococcus aureus subsp. aureus; 
#=GS 1kq1W00/1-77     AC A0A0H3JV59
#=GS 1kq1W00/1-77     OS Staphylococcus aureus subsp. aureus Mu50
#=GS 1kq1W00/1-77     DE RNA-binding protein Hfq
#=GS 1kq1W00/1-77     DR CATH; 1kq1; W:6-66; 
#=GS 1kq1W00/1-77     DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcaceae; Staphylococcus; Staphylococcus aureus; Staphylococcus aureus subsp. aureus; 
#=GS 1kq1T00/1-77     AC A0A0H3JV59
#=GS 1kq1T00/1-77     OS Staphylococcus aureus subsp. aureus Mu50
#=GS 1kq1T00/1-77     DE RNA-binding protein Hfq
#=GS 1kq1T00/1-77     DR CATH; 1kq1; T:6-66; 
#=GS 1kq1T00/1-77     DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcaceae; Staphylococcus; Staphylococcus aureus; Staphylococcus aureus subsp. aureus; 
#=GS 1kq1S00/1-77     AC A0A0H3JV59
#=GS 1kq1S00/1-77     OS Staphylococcus aureus subsp. aureus Mu50
#=GS 1kq1S00/1-77     DE RNA-binding protein Hfq
#=GS 1kq1S00/1-77     DR CATH; 1kq1; S:6-66; 
#=GS 1kq1S00/1-77     DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcaceae; Staphylococcus; Staphylococcus aureus; Staphylococcus aureus subsp. aureus; 
#=GS 1kq1R00/1-77     AC A0A0H3JV59
#=GS 1kq1R00/1-77     OS Staphylococcus aureus subsp. aureus Mu50
#=GS 1kq1R00/1-77     DE RNA-binding protein Hfq
#=GS 1kq1R00/1-77     DR CATH; 1kq1; R:6-66; 
#=GS 1kq1R00/1-77     DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcaceae; Staphylococcus; Staphylococcus aureus; Staphylococcus aureus subsp. aureus; 
#=GS 1kq1N00/1-77     AC A0A0H3JV59
#=GS 1kq1N00/1-77     OS Staphylococcus aureus subsp. aureus Mu50
#=GS 1kq1N00/1-77     DE RNA-binding protein Hfq
#=GS 1kq1N00/1-77     DR CATH; 1kq1; N:6-66; 
#=GS 1kq1N00/1-77     DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcaceae; Staphylococcus; Staphylococcus aureus; Staphylococcus aureus subsp. aureus; 
#=GS 1kq1M00/1-77     AC A0A0H3JV59
#=GS 1kq1M00/1-77     OS Staphylococcus aureus subsp. aureus Mu50
#=GS 1kq1M00/1-77     DE RNA-binding protein Hfq
#=GS 1kq1M00/1-77     DR CATH; 1kq1; M:6-66; 
#=GS 1kq1M00/1-77     DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcaceae; Staphylococcus; Staphylococcus aureus; Staphylococcus aureus subsp. aureus; 
#=GS 1kq1K00/1-77     AC A0A0H3JV59
#=GS 1kq1K00/1-77     OS Staphylococcus aureus subsp. aureus Mu50
#=GS 1kq1K00/1-77     DE RNA-binding protein Hfq
#=GS 1kq1K00/1-77     DR CATH; 1kq1; K:6-66; 
#=GS 1kq1K00/1-77     DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcaceae; Staphylococcus; Staphylococcus aureus; Staphylococcus aureus subsp. aureus; 
#=GS 1kq1I00/1-77     AC A0A0H3JV59
#=GS 1kq1I00/1-77     OS Staphylococcus aureus subsp. aureus Mu50
#=GS 1kq1I00/1-77     DE RNA-binding protein Hfq
#=GS 1kq1I00/1-77     DR CATH; 1kq1; I:6-65; 
#=GS 1kq1I00/1-77     DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcaceae; Staphylococcus; Staphylococcus aureus; Staphylococcus aureus subsp. aureus; 
#=GS 1kq1H00/1-77     AC A0A0H3JV59
#=GS 1kq1H00/1-77     OS Staphylococcus aureus subsp. aureus Mu50
#=GS 1kq1H00/1-77     DE RNA-binding protein Hfq
#=GS 1kq1H00/1-77     DR CATH; 1kq1; H:1-66; 
#=GS 1kq1H00/1-77     DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcaceae; Staphylococcus; Staphylococcus aureus; Staphylococcus aureus subsp. aureus; 
#=GS 1kq1B00/1-77     AC A0A0H3JV59
#=GS 1kq1B00/1-77     OS Staphylococcus aureus subsp. aureus Mu50
#=GS 1kq1B00/1-77     DE RNA-binding protein Hfq
#=GS 1kq1B00/1-77     DR CATH; 1kq1; B:6-66; 
#=GS 1kq1B00/1-77     DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcaceae; Staphylococcus; Staphylococcus aureus; Staphylococcus aureus subsp. aureus; 
#=GS 1kq1A00/1-77     AC A0A0H3JV59
#=GS 1kq1A00/1-77     OS Staphylococcus aureus subsp. aureus Mu50
#=GS 1kq1A00/1-77     DE RNA-binding protein Hfq
#=GS 1kq1A00/1-77     DR CATH; 1kq1; A:6-65; 
#=GS 1kq1A00/1-77     DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcaceae; Staphylococcus; Staphylococcus aureus; Staphylococcus aureus subsp. aureus; 
#=GS A0A2S4EP27/1-77  AC A0A2S4EP27
#=GS A0A2S4EP27/1-77  OS Bacillus amyloliquefaciens
#=GS A0A2S4EP27/1-77  DE RNA-binding protein Hfq
#=GS A0A2S4EP27/1-77  DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus subtilis group; Bacillus amyloliquefaciens group; Bacillus amyloliquefaciens; 
#=GS A0A1E8WW22/1-77  AC A0A1E8WW22
#=GS A0A1E8WW22/1-77  OS Staphylococcus sp. HMSC055H04
#=GS A0A1E8WW22/1-77  DE RNA-binding protein Hfq
#=GS A0A1E8WW22/1-77  DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcaceae; Staphylococcus; Staphylococcus sp. HMSC055H04; 
#=GS W8U6E2/1-77      AC W8U6E2
#=GS W8U6E2/1-77      OS Staphylococcus aureus
#=GS W8U6E2/1-77      DE RNA-binding protein Hfq
#=GS W8U6E2/1-77      DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcaceae; Staphylococcus; Staphylococcus aureus; 
#=GS A0A0H3JV59/1-77  AC A0A0H3JV59
#=GS A0A0H3JV59/1-77  OS Staphylococcus aureus subsp. aureus Mu50
#=GS A0A0H3JV59/1-77  DE RNA-binding protein Hfq
#=GS A0A0H3JV59/1-77  DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcaceae; Staphylococcus; Staphylococcus aureus; Staphylococcus aureus subsp. aureus; 
#=GS A0A0H2XG06/1-77  AC A0A0H2XG06
#=GS A0A0H2XG06/1-77  OS Staphylococcus aureus subsp. aureus USA300
#=GS A0A0H2XG06/1-77  DE RNA-binding protein Hfq
#=GS A0A0H2XG06/1-77  DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcaceae; Staphylococcus; Staphylococcus aureus; Staphylococcus aureus subsp. aureus; 
#=GS T1Y7Z5/1-77      AC T1Y7Z5
#=GS T1Y7Z5/1-77      OS Staphylococcus aureus subsp. aureus CN1
#=GS T1Y7Z5/1-77      DE RNA-binding protein Hfq
#=GS T1Y7Z5/1-77      DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcaceae; Staphylococcus; Staphylococcus aureus; Staphylococcus aureus subsp. aureus; 
#=GS A0A0E1VJZ5/1-77  AC A0A0E1VJZ5
#=GS A0A0E1VJZ5/1-77  OS Staphylococcus aureus subsp. aureus USA300_TCH959
#=GS A0A0E1VJZ5/1-77  DE RNA-binding protein Hfq
#=GS A0A0E1VJZ5/1-77  DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcaceae; Staphylococcus; Staphylococcus aureus; Staphylococcus aureus subsp. aureus; 
#=GS A0A0H3JW82/1-77  AC A0A0H3JW82
#=GS A0A0H3JW82/1-77  OS Staphylococcus aureus subsp. aureus MW2
#=GS A0A0H3JW82/1-77  DE RNA-binding protein Hfq
#=GS A0A0H3JW82/1-77  DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcaceae; Staphylococcus; Staphylococcus aureus; Staphylococcus aureus subsp. aureus; 
#=GS A0A0H2WZ42/1-77  AC A0A0H2WZ42
#=GS A0A0H2WZ42/1-77  OS Staphylococcus aureus subsp. aureus COL
#=GS A0A0H2WZ42/1-77  DE RNA-binding protein Hfq
#=GS A0A0H2WZ42/1-77  DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcaceae; Staphylococcus; Staphylococcus aureus; Staphylococcus aureus subsp. aureus; 
#=GS A0A0H3K7V1/1-77  AC A0A0H3K7V1
#=GS A0A0H3K7V1/1-77  OS Staphylococcus aureus subsp. aureus str. Newman
#=GS A0A0H3K7V1/1-77  DE RNA-binding protein Hfq
#=GS A0A0H3K7V1/1-77  DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcaceae; Staphylococcus; Staphylococcus aureus; Staphylococcus aureus subsp. aureus; 
#=GS A0A0E1AFY7/1-77  AC A0A0E1AFY7
#=GS A0A0E1AFY7/1-77  OS Staphylococcus aureus subsp. aureus Z172
#=GS A0A0E1AFY7/1-77  DE RNA-binding protein Hfq
#=GS A0A0E1AFY7/1-77  DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcaceae; Staphylococcus; Staphylococcus aureus; Staphylococcus aureus subsp. aureus; 
#=GS A0A2S6D8Y0/1-77  AC A0A2S6D8Y0
#=GS A0A2S6D8Y0/1-77  OS Staphylococcus aureus
#=GS A0A2S6D8Y0/1-77  DE RNA-binding protein Hfq
#=GS A0A2S6D8Y0/1-77  DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcaceae; Staphylococcus; Staphylococcus aureus; 
#=GS A0A0D1I1E7/1-77  AC A0A0D1I1E7
#=GS A0A0D1I1E7/1-77  OS Staphylococcus aureus subsp. aureus
#=GS A0A0D1I1E7/1-77  DE RNA-binding protein Hfq
#=GS A0A0D1I1E7/1-77  DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcaceae; Staphylococcus; Staphylococcus aureus; Staphylococcus aureus subsp. aureus; 
#=GF SQ 33
1kq2M00/1-77             MIANENIQDKALENFKANQTEVTVFFLNGFQMKGVIEEYDKYVVSLNSQGKQHLIYKHAISTYTVETEGQASTESEE
Q2FYZ1/1-77              MIANENIQDKALENFKANQTEVTVFFLNGFQMKGVIEEYDKYVVSLNSQGKQHLIYKHAISTYTVETEGQASTESEE
A0A0H3JKV2/1-77          MIANENIQDKALENFKANQTEVTVFFLNGFQMKGVIEEYDKYVVSLNSQGKQHLIYKHAISTYTVETEGQASTESEE
1kq2K00/1-77             MIANENIQDKALENFKANQTEVTVFFLNGFQMKGVIEEYDKYVVSLNSQGKQHLIYKHAISTYTVETEGQASTESEE
1kq2I00/1-77             MIANENIQDKALENFKANQTEVTVFFLNGFQMKGVIEEYDKYVVSLNSQGKQHLIYKHAISTYTVETEGQASTESEE
1kq2H00/1-77             MIANENIQDKALENFKANQTEVTVFFLNGFQMKGVIEEYDKYVVSLNSQGKQHLIYKHAISTYTVETEGQASTESEE
1kq2B00/1-77             MIANENIQDKALENFKANQTEVTVFFLNGFQMKGVIEEYDKYVVSLNSQGKQHLIYKHAISTYTVETEGQASTESEE
1kq2A00/1-77             MIANENIQDKALENFKANQTEVTVFFLNGFQMKGVIEEYDKYVVSLNSQGKQHLIYKHAISTYTVETEGQASTESEE
1kq1Y00/1-77             MIANENIQDKALENFKANQTEVTVFFLNGFQMKGVIEEYDKYVVSLNSQGKQHLIYKHAISTYTVETEGQASTESEE
1kq1W00/1-77             MIANENIQDKALENFKANQTEVTVFFLNGFQMKGVIEEYDKYVVSLNSQGKQHLIYKHAISTYTVETEGQASTESEE
1kq1T00/1-77             MIANENIQDKALENFKANQTEVTVFFLNGFQMKGVIEEYDKYVVSLNSQGKQHLIYKHAISTYTVETEGQASTESEE
1kq1S00/1-77             MIANENIQDKALENFKANQTEVTVFFLNGFQMKGVIEEYDKYVVSLNSQGKQHLIYKHAISTYTVETEGQASTESEE
1kq1R00/1-77             MIANENIQDKALENFKANQTEVTVFFLNGFQMKGVIEEYDKYVVSLNSQGKQHLIYKHAISTYTVETEGQASTESEE
1kq1N00/1-77             MIANENIQDKALENFKANQTEVTVFFLNGFQMKGVIEEYDKYVVSLNSQGKQHLIYKHAISTYTVETEGQASTESEE
1kq1M00/1-77             MIANENIQDKALENFKANQTEVTVFFLNGFQMKGVIEEYDKYVVSLNSQGKQHLIYKHAISTYTVETEGQASTESEE
1kq1K00/1-77             MIANENIQDKALENFKANQTEVTVFFLNGFQMKGVIEEYDKYVVSLNSQGKQHLIYKHAISTYTVETEGQASTESEE
1kq1I00/1-77             MIANENIQDKALENFKANQTEVTVFFLNGFQMKGVIEEYDKYVVSLNSQGKQHLIYKHAISTYTVETEGQASTESEE
1kq1H00/1-77             MIANENIQDKALENFKANQTEVTVFFLNGFQMKGVIEEYDKYVVSLNSQGKQHLIYKHAISTYTVETEGQASTESEE
1kq1B00/1-77             MIANENIQDKALENFKANQTEVTVFFLNGFQMKGVIEEYDKYVVSLNSQGKQHLIYKHAISTYTVETEGQASTESEE
1kq1A00/1-77             MIANENIQDKALENFKANQTEVTVFFLNGFQMKGVIEEYDKYVVSLNSQGKQHLIYKHAISTYTVETEGQASTESEE
A0A2S4EP27/1-77          MIANENIQDKALENFKANQTEVTVFFLNGFQMKGVIEEYDKYVVSLNSQGKQHLIYKHAISTYTVETEGQASTESEE
A0A1E8WW22/1-77          MIANENIQDKALENFKANQTEVTVFFLNGFQMKGVIEEYDKYVVSLNSQGKQHLIYKHAISTYTVETEGQASTESEE
W8U6E2/1-77              MIANENIQDKALENFKANQTEVTVFFLNGFQMKGVIEEYDKYVVSLNSQGKQHLIYKHAISTYTVETEGQASTESEE
A0A0H3JV59/1-77          MIANENIQDKALENFKANQTEVTVFFLNGFQMKGVIEEYDKYVVSLNSQGKQHLIYKHAISTYTVETEGQASTESEE
A0A0H2XG06/1-77          MIANENIQDKALENFKANQTEVTVFFLNGFQMKGVIEEYDKYVVSLNSQGKQHLIYKHAISTYTVETEGQASTESEE
T1Y7Z5/1-77              MIANENIQDKALENFKANQTEVTVFFLNGFQMKGVIEEYDKYVVSLNSQGKQHLIYKHAISTYTVETEGQASTESEE
A0A0E1VJZ5/1-77          MIANENIQDKALENFKANQTEVTVFFLNGFQMKGVIEEYDKYVVSLNSQGKQHLIYKHAISTYTVETEGQASTESEE
A0A0H3JW82/1-77          MIANENIQDKALENFKANQTEVTVFFLNGFQMKGVIEEYDKYVVSLNSQGKQHLIYKHAISTYTVETEGQASTESEE
A0A0H2WZ42/1-77          MIANENIQDKALENFKANQTEVTVFFLNGFQMKGVIEEYDKYVVSLNSQGKQHLIYKHAISTYTVETEGQASTESEE
A0A0H3K7V1/1-77          MIANENIQDKALENFKANQTEVTVFFLNGFQMKGVIEEYDKYVVSLNSQGKQHLIYKHAISTYTVETEGQASTESEE
A0A0E1AFY7/1-77          MIANENIQDKALENFKANQTEVTVFFLNGFQMKGVIEEYDKYVVSLNSQGKQHLIYKHAISTYTVETEGQASTESEE
A0A2S6D8Y0/1-77          MIANENIQDKALENFKANQTEVTVFFLNGFQMKGVIEEYDKYVVSLNSQGKQHLIYKHAISTYTVETEGQESTESEE
A0A0D1I1E7/1-77          MIANENIQDKALENFKANQTEVTVFFLNGFQMKGVIEEYDKYVVSLNSQGKQHLIYKHAISTYTVETEGQESTESEE
#=GC scorecons           99999999999999999999999999999999999999999999999999999999999999999999995999999
#=GC scorecons_70        **********************************************************************_******
#=GC scorecons_80        **********************************************************************_******
#=GC scorecons_90        **********************************************************************_******
//