# STOCKHOLM 1.0
#=GF ID 2.20.25.10/FF/000030
#=GF DE DNA-directed RNA polymerase II subunit RPB9
#=GF AC 2.20.25.10/FF/000030
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 16.658
#=GS Q8I241/52-117       AC Q8I241
#=GS Q8I241/52-117       OS Plasmodium falciparum 3D7
#=GS Q8I241/52-117       DE DNA-directed RNA polymerase II subunit RPB9,putative
#=GS Q8I241/52-117       DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS Q8I241/52-117       DR GO; GO:0003899; GO:0006366; 
#=GS A0A077X796/52-116   AC A0A077X796
#=GS A0A077X796/52-116   OS Plasmodium berghei ANKA
#=GS A0A077X796/52-116   DE DNA-directed RNA polymerase 2 subunit, putative
#=GS A0A077X796/52-116   DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Vinckeia); Plasmodium berghei; 
#=GS A0A1A8VMP7/52-117   AC A0A1A8VMP7
#=GS A0A1A8VMP7/52-117   OS Plasmodium malariae
#=GS A0A1A8VMP7/52-117   DE DNA-directed RNA polymerase 2 subunit, putative
#=GS A0A1A8VMP7/52-117   DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Plasmodium); Plasmodium malariae; 
#=GS A0A1J1HGA7/52-117   AC A0A1J1HGA7
#=GS A0A1J1HGA7/52-117   OS Plasmodium relictum
#=GS A0A1J1HGA7/52-117   DE DNA-directed RNA polymerase 2, putative
#=GS A0A1J1HGA7/52-117   DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Haemamoeba); Plasmodium relictum; 
#=GS A0A1A8VMT4/109-173  AC A0A1A8VMT4
#=GS A0A1A8VMT4/109-173  OS Plasmodium ovale curtisi
#=GS A0A1A8VMT4/109-173  DE DNA-directed RNA polymerase 2 subunit, putative
#=GS A0A1A8VMT4/109-173  DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Plasmodium); Plasmodium ovale; Plasmodium ovale curtisi; 
#=GS A0A2P9CIQ6/52-116   AC A0A2P9CIQ6
#=GS A0A2P9CIQ6/52-116   OS Plasmodium sp. DRC-Itaito
#=GS A0A2P9CIQ6/52-116   DE DNA-directed RNA polymerase 2, putative
#=GS A0A2P9CIQ6/52-116   DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium sp. DRC-Itaito; 
#=GS A0A151LX51/52-116   AC A0A151LX51
#=GS A0A151LX51/52-116   OS Plasmodium gaboni
#=GS A0A151LX51/52-116   DE Putative DNA-directed RNA polymerase 2
#=GS A0A151LX51/52-116   DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium gaboni; 
#=GS A0A060RMU6/52-117   AC A0A060RMU6
#=GS A0A060RMU6/52-117   OS Plasmodium reichenowi
#=GS A0A060RMU6/52-117   DE DNA-directed RNA polymerase 2, putative
#=GS A0A060RMU6/52-117   DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium reichenowi; 
#=GS A0A1C3KMM9/52-116   AC A0A1C3KMM9
#=GS A0A1C3KMM9/52-116   OS Plasmodium ovale
#=GS A0A1C3KMM9/52-116   DE DNA-directed RNA polymerase II subunit RPB9, putative
#=GS A0A1C3KMM9/52-116   DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Plasmodium); Plasmodium ovale; 
#=GS A0A0L1I8A4/52-117   AC A0A0L1I8A4
#=GS A0A0L1I8A4/52-117   OS Plasmodium falciparum IGH-CR14
#=GS A0A0L1I8A4/52-117   DE DNA-directed RNA polymerase 2 subunit
#=GS A0A0L1I8A4/52-117   DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS A0A024WF61/52-117   AC A0A024WF61
#=GS A0A024WF61/52-117   OS Plasmodium falciparum Tanzania (2000708)
#=GS A0A024WF61/52-117   DE Uncharacterized protein
#=GS A0A024WF61/52-117   DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS W7FK32/52-117       AC W7FK32
#=GS W7FK32/52-117       OS Plasmodium falciparum 7G8
#=GS W7FK32/52-117       DE Uncharacterized protein
#=GS W7FK32/52-117       DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS A0A024XEU3/52-117   AC A0A024XEU3
#=GS A0A024XEU3/52-117   OS Plasmodium falciparum CAMP/Malaysia
#=GS A0A024XEU3/52-117   DE Uncharacterized protein
#=GS A0A024XEU3/52-117   DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS A0A0L7K6C7/52-117   AC A0A0L7K6C7
#=GS A0A0L7K6C7/52-117   OS Plasmodium falciparum HB3
#=GS A0A0L7K6C7/52-117   DE Uncharacterized protein
#=GS A0A0L7K6C7/52-117   DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS W7G5S0/52-117       AC W7G5S0
#=GS W7G5S0/52-117       OS Plasmodium falciparum Santa Lucia
#=GS W7G5S0/52-117       DE Uncharacterized protein
#=GS W7G5S0/52-117       DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS W7JJY1/52-117       AC W7JJY1
#=GS W7JJY1/52-117       OS Plasmodium falciparum UGT5.1
#=GS W7JJY1/52-117       DE Uncharacterized protein
#=GS W7JJY1/52-117       DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS A0A024VFW8/52-117   AC A0A024VFW8
#=GS A0A024VFW8/52-117   OS Plasmodium falciparum Vietnam Oak-Knoll (FVO)
#=GS A0A024VFW8/52-117   DE Uncharacterized protein
#=GS A0A024VFW8/52-117   DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS A0A2I0BXP5/52-117   AC A0A2I0BXP5
#=GS A0A2I0BXP5/52-117   OS Plasmodium falciparum NF54
#=GS A0A2I0BXP5/52-117   DE DNA-directed RNA polymerase II subunit RPB9
#=GS A0A2I0BXP5/52-117   DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS A0A0Y9TJK4/52-116   AC A0A0Y9TJK4
#=GS A0A0Y9TJK4/52-116   OS Plasmodium berghei
#=GS A0A0Y9TJK4/52-116   DE DNA-directed RNA polymerase II subunit RPB9, putative
#=GS A0A0Y9TJK4/52-116   DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Vinckeia); Plasmodium berghei; 
#=GS W4IR32/52-117       AC W4IR32
#=GS W4IR32/52-117       OS Plasmodium falciparum NF135/5.C10
#=GS W4IR32/52-117       DE Uncharacterized protein
#=GS W4IR32/52-117       DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GF SQ 20
Q8I241/52-117               NYDRKEDIYIHPETKNDPALGRVRDWVCKQCGNNEAVFLQLAEKISYNPMALIYVCTNKHCHYWEK
A0A077X796/52-116           NYNRKEDIYIHPETKNDPALGRVRDWVCKQCNNSEAVFLQLPEKISYNPMALIYVCTNKNCQYWE-
A0A1A8VMP7/52-117           NYNRKEDIYIHPETKNDPALGRVRDWTCKQCGNNEAVFLQLPEKISYNPMALIYVCTDKHCHYWEK
A0A1J1HGA7/52-117           NYNRKEDIYIHPETKNDPALGRVRDWKCKQCGNNEAVFLQLPEKISYNPMALIYVCTDKNCHYWEK
A0A1A8VMT4/109-173          NYNRKEDIYIHPETKNDPALGRVRDWTCKQCGNNEAVFLQLPEKISYNPMALIYVCTDKHCHYWE-
A0A2P9CIQ6/52-116           NYDRKEDIYIHPETKNDPALGRVRDWTCKQCGNNEAVFLQLAEKISYNPMALIYVCTNKNCYYWE-
A0A151LX51/52-116           NYDRKEDIYIHPETKNDPALGRVRDWTCKQCGNNEAVFLQLAEKISYNPMALIYVCTNKNCYYWE-
A0A060RMU6/52-117           NYDRKEDIYIHPETKNDPALGRVRDWVCKQCGNNEAVFLQLAEKISYNPMALIYVCTNKHCHYWEK
A0A1C3KMM9/52-116           NYNRKEDIYIHPETKNDPALGRVRDWTCKQCGNNEAVFLQLPEKISYNPMALIYVCTDKHCHYWE-
A0A0L1I8A4/52-117           NYDRKEDIYIHPETKNDPALGRVRDWVCKQCGNNEAVFLQLAEKISYNPMALIYVCTNKHCHYWEK
A0A024WF61/52-117           NYDRKEDIYIHPETKNDPALGRVRDWVCKQCGNNEAVFLQLAEKISYNPMALIYVCTNKHCHYWEK
W7FK32/52-117               NYDRKEDIYIHPETKNDPALGRVRDWVCKQCGNNEAVFLQLAEKISYNPMALIYVCTNKHCHYWEK
A0A024XEU3/52-117           NYDRKEDIYIHPETKNDPALGRVRDWVCKQCGNNEAVFLQLAEKISYNPMALIYVCTNKHCHYWEK
A0A0L7K6C7/52-117           NYDRKEDIYIHPETKNDPALGRVRDWVCKQCGNNEAVFLQLAEKISYNPMALIYVCTNKHCHYWEK
W7G5S0/52-117               NYDRKEDIYIHPETKNDPALGRVRDWVCKQCGNNEAVFLQLAEKISYNPMALIYVCTNKHCHYWEK
W7JJY1/52-117               NYDRKEDIYIHPETKNDPALGRVRDWVCKQCGNNEAVFLQLAEKISYNPMALIYVCTNKHCHYWEK
A0A024VFW8/52-117           NYDRKEDIYIHPETKNDPALGRVRDWVCKQCGNNEAVFLQLAEKISYNPMALIYVCTNKHCHYWEK
A0A2I0BXP5/52-117           NYDRKEDIYIHPETKNDPALGRVRDWVCKQCGNNEAVFLQLAEKISYNPMALIYVCTNKHCHYWEK
A0A0Y9TJK4/52-116           NYNRKEDIYIHPETKNDPALGRVRDWVCKQCNNSEAVFLQLPEKISYNPMALIYVCTNKNCQYWE-
W4IR32/52-117               NYDRKEDIYIHPETKNDPALGRVRDWVCKQCGNNEAVFLQLAEKISYNPMALIYVCTNKHCHYWEK
#=GC scorecons              996999999999999999999999995999979799999996999999999999999696969992
#=GC scorecons_70           **************************_**************_*****************_*****_
#=GC scorecons_80           **_***********************_****_*********_***************_*_*_***_
#=GC scorecons_90           **_***********************_****_*_*******_***************_*_*_***_
//