# STOCKHOLM 1.0
#=GF ID 2.170.120.12/FF/000008
#=GF DE DNA-directed RNA polymerase II subunit RPB3
#=GF AC 2.170.120.12/FF/000008
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 11.078
#=GS Q8I2S6/48-175      AC Q8I2S6
#=GS Q8I2S6/48-175      OS Plasmodium falciparum 3D7
#=GS Q8I2S6/48-175      DE DNA-directed RNA polymerase II subunit RPB3,putative
#=GS Q8I2S6/48-175      DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS A0A1J1H3X8/48-175  AC A0A1J1H3X8
#=GS A0A1J1H3X8/48-175  OS Plasmodium relictum
#=GS A0A1J1H3X8/48-175  DE DNA-directed RNA polymerase II subunit RPB3, putative
#=GS A0A1J1H3X8/48-175  DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Haemamoeba); Plasmodium relictum; 
#=GS A0A2P9BEJ1/48-175  AC A0A2P9BEJ1
#=GS A0A2P9BEJ1/48-175  OS Plasmodium sp. gorilla clade G1
#=GS A0A2P9BEJ1/48-175  DE DNA-directed RNA polymerase II subunit RPB3, putative
#=GS A0A2P9BEJ1/48-175  DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium sp. gorilla clade G1; 
#=GS A0A151LLY2/48-175  AC A0A151LLY2
#=GS A0A151LLY2/48-175  OS Plasmodium gaboni
#=GS A0A151LLY2/48-175  DE Putative DNA-directed RNA polymerase II
#=GS A0A151LLY2/48-175  DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium gaboni; 
#=GS A0A151LI36/48-175  AC A0A151LI36
#=GS A0A151LI36/48-175  OS Plasmodium reichenowi
#=GS A0A151LI36/48-175  DE DNA-directed RNA polymerase II, putative
#=GS A0A151LI36/48-175  DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium reichenowi; 
#=GS W7JXY0/48-175      AC W7JXY0
#=GS W7JXY0/48-175      OS Plasmodium falciparum NF54
#=GS W7JXY0/48-175      DE DNA-directed RNA polymerase II subunit RPB3
#=GS W7JXY0/48-175      DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS A0A024W747/48-175  AC A0A024W747
#=GS A0A024W747/48-175  OS Plasmodium falciparum Tanzania (2000708)
#=GS A0A024W747/48-175  DE Uncharacterized protein
#=GS A0A024W747/48-175  DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS A0A024V6J5/48-175  AC A0A024V6J5
#=GS A0A024V6J5/48-175  OS Plasmodium falciparum Vietnam Oak-Knoll (FVO)
#=GS A0A024V6J5/48-175  DE Uncharacterized protein
#=GS A0A024V6J5/48-175  DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS A0A0L7M1I4/48-175  AC A0A0L7M1I4
#=GS A0A0L7M1I4/48-175  OS Plasmodium falciparum Dd2
#=GS A0A0L7M1I4/48-175  DE Uncharacterized protein
#=GS A0A0L7M1I4/48-175  DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS A0A024X8Z1/48-175  AC A0A024X8Z1
#=GS A0A024X8Z1/48-175  OS Plasmodium falciparum CAMP/Malaysia
#=GS A0A024X8Z1/48-175  DE Uncharacterized protein
#=GS A0A024X8Z1/48-175  DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS A0A0L0CYB1/48-175  AC A0A0L0CYB1
#=GS A0A0L0CYB1/48-175  OS Plasmodium falciparum RAJ116
#=GS A0A0L0CYB1/48-175  DE DNA-directed RNA polymerase II
#=GS A0A0L0CYB1/48-175  DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS W4J0L4/48-175      AC W4J0L4
#=GS W4J0L4/48-175      OS Plasmodium falciparum Palo Alto/Uganda
#=GS W4J0L4/48-175      DE Uncharacterized protein
#=GS W4J0L4/48-175      DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS W7JP21/48-175      AC W7JP21
#=GS W7JP21/48-175      OS Plasmodium falciparum UGT5.1
#=GS W7JP21/48-175      DE Uncharacterized protein
#=GS W7JP21/48-175      DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS A0A024WSG7/48-175  AC A0A024WSG7
#=GS A0A024WSG7/48-175  OS Plasmodium falciparum MaliPS096_E11
#=GS A0A024WSG7/48-175  DE Uncharacterized protein
#=GS A0A024WSG7/48-175  DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS W7F2H9/48-175      AC W7F2H9
#=GS W7F2H9/48-175      OS Plasmodium falciparum 7G8
#=GS W7F2H9/48-175      DE Uncharacterized protein
#=GS W7F2H9/48-175      DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS A0A0L7K924/48-175  AC A0A0L7K924
#=GS A0A0L7K924/48-175  OS Plasmodium falciparum HB3
#=GS A0A0L7K924/48-175  DE Uncharacterized protein
#=GS A0A0L7K924/48-175  DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS A0A0L1I4H3/48-175  AC A0A0L1I4H3
#=GS A0A0L1I4H3/48-175  OS Plasmodium falciparum IGH-CR14
#=GS A0A0L1I4H3/48-175  DE DNA-directed RNA polymerase II
#=GS A0A0L1I4H3/48-175  DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS W4IHL1/48-175      AC W4IHL1
#=GS W4IHL1/48-175      OS Plasmodium falciparum NF135/5.C10
#=GS W4IHL1/48-175      DE Uncharacterized protein
#=GS W4IHL1/48-175      DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS A0A024VG55/48-175  AC A0A024VG55
#=GS A0A024VG55/48-175  OS Plasmodium falciparum FCH/4
#=GS A0A024VG55/48-175  DE Uncharacterized protein
#=GS A0A024VG55/48-175  DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS W7FZK9/48-175      AC W7FZK9
#=GS W7FZK9/48-175      OS Plasmodium falciparum Santa Lucia
#=GS W7FZK9/48-175      DE Uncharacterized protein
#=GS W7FZK9/48-175      DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS A0A0L0D007/28-155  AC A0A0L0D007
#=GS A0A0L0D007/28-155  OS Plasmodium falciparum RAJ116
#=GS A0A0L0D007/28-155  DE DNA-directed RNA polymerase II
#=GS A0A0L0D007/28-155  DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS A0A060RXG7/48-175  AC A0A060RXG7
#=GS A0A060RXG7/48-175  OS Plasmodium reichenowi
#=GS A0A060RXG7/48-175  DE DNA-directed RNA polymerase II, putative
#=GS A0A060RXG7/48-175  DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium reichenowi; 
#=GF SQ 22
Q8I2S6/48-175              TLAIDVVNVYENTSAFHDEFIAHRLGLIPIDSRNVNNYEFREKCKCKETCSKCTIQYIIEVKCNHSNKIDVSHYDIESLEHEPNVPMPIPHGNKNSVSENAIPIVTLSKNQTLHMKLIATKGIGKMHA
A0A1J1H3X8/48-175          TLAIDVVNVYENTSSFHDEYLAHRLGLIPIDSRNVNNYEFREKCKCKETCSKCTIQYVIEVKCNNANKIDISHYDIESLDHEPNVPMPIPHGKKNTKIENAIPIVTLSKNQTLHMKLIATKGIGKMHA
A0A2P9BEJ1/48-175          TLAIDVVNVYENTSAFHDEFIAHRLGLIPIDSRNVNNYEFREKCKCKETCSKCTIQYIIEVKCNHSNKIDVSHYDIESLEHEPNVPMPIPHGNKNSVSENAIPIVTLSKNQTLHMKLIATKGIGKMHA
A0A151LLY2/48-175          TLAIDVVNVYENTSAFHDEFIAHRLGLIPIDSRNVNNYEFREKCKCKETCSKCTIQYIIEVKCNNTNKIDVSHYDIESLEHEPNIPMPIPHGNKNSLRENAIPIVTLSKNQTLHMKLIATKGIGKMHA
A0A151LI36/48-175          TLAIDVVNVYENTSAFHDEFIAHRLGLIPIDSRNVNNYEFREKCKCKETCSKCTIQYIIEVKCNHSNKIDVSHYDIESLEHEPNVPMPIPHGNKNSVSENAIPIVTLSKNQTLHMKLIATKGIGKMHA
W7JXY0/48-175              TLAIDVVNVYENTSAFHDEFIAHRLGLIPIDSRNVNNYEFREKCKCKETCSKCTIQYIIEVKCNHSNKIDVSHYDIESLEHEPNVPMPIPHGNKNSVSENAIPIVTLSKNQTLHMKLIATKGIGKMHA
A0A024W747/48-175          TLAIDVVNVYENTSAFHDEFIAHRLGLIPIDSRNVNNYEFREKCKCKETCSKCTIQYIIEVKCNHSNKIDVSHYDIESLEHEPNVPMPIPHGNKNSVSENAIPIVTLSKNQTLHMKLIATKGIGKMHA
A0A024V6J5/48-175          TLAIDVVNVYENTSAFHDEFIAHRLGLIPIDSRNVNNYEFREKCKCKETCSKCTIQYIIEVKCNHSNKIDVSHYDIESLEHEPNVPMPIPHGNKNSVSENAIPIVTLSKNQTLHMKLIATKGIGKMHA
A0A0L7M1I4/48-175          TLAIDVVNVYENTSAFHDEFIAHRLGLIPIDSRNVNNYEFREKCKCKETCSKCTIQYIIEVKCNHSNKIDVSHYDIESLEHEPNVPMPIPHGNKNSVSENAIPIVTLSKNQTLHMKLIATKGIGKMHA
A0A024X8Z1/48-175          TLAIDVVNVYENTSAFHDEFIAHRLGLIPIDSRNVNNYEFREKCKCKETCSKCTIQYIIEVKCNHSNKIDVSHYDIESLEHEPNVPMPIPHGNKNSVSENAIPIVTLSKNQTLHMKLIATKGIGKMHA
A0A0L0CYB1/48-175          TLAIDVVNVYENTSAFHDEFIAHRLGLIPIDSRNVNNYEFREKCKCKETCSKCTIQYIIEVKCNHSNKIDVSHYDIESLEHEPNVPMPIPHGNKNSVSENAIPIVTLSKNQTLHMKLIATKGIGKMHA
W4J0L4/48-175              TLAIDVVNVYENTSAFHDEFIAHRLGLIPIDSRNVNNYEFREKCKCKETCSKCTIQYIIEVKCNHSNKIDVSHYDIESLEHEPNVPMPIPHGNKNSVSENAIPIVTLSKNQTLHMKLIATKGIGKMHA
W7JP21/48-175              TLAIDVVNVYENTSAFHDEFIAHRLGLIPIDSRNVNNYEFREKCKCKETCSKCTIQYIIEVKCNHSNKIDVSHYDIESLEHEPNVPMPIPHGNKNSVSENAIPIVTLSKNQTLHMKLIATKGIGKMHA
A0A024WSG7/48-175          TLAIDVVNVYENTSAFHDEFIAHRLGLIPIDSRNVNNYEFREKCKCKETCSKCTIQYIIEVKCNHSNKIDVSHYDIESLEHEPNVPMPIPHGNKNSVSENAIPIVTLSKNQTLHMKLIATKGIGKMHA
W7F2H9/48-175              TLAIDVVNVYENTSAFHDEFIAHRLGLIPIDSRNVNNYEFREKCKCKETCSKCTIQYIIEVKCNHSNKIDVSHYDIESLEHEPNVPMPIPHGNKNSVSENAIPIVTLSKNQTLHMKLIATKGIGKMHA
A0A0L7K924/48-175          TLAIDVVNVYENTSAFHDEFIAHRLGLIPIDSRNVNNYEFREKCKCKETCSKCTIQYIIEVKCNHSNKIDVSHYDIESLEHEPNVPMPIPHGNKNSVSENAIPIVTLSKNQTLHMKLIATKGIGKMHA
A0A0L1I4H3/48-175          TLAIDVVNVYENTSAFHDEFIAHRLGLIPIDSRNVNNYEFREKCKCKETCSKCTIQYIIEVKCNHSNKIDVSHYDIESLEHEPNVPMPIPHGNKNSVSENAIPIVTLSKNQTLHMKLIATKGIGKMHA
W4IHL1/48-175              TLAIDVVNVYENTSAFHDEFIAHRLGLIPIDSRNVNNYEFREKCKCKETCSKCTIQYIIEVKCNHSNKIDVSHYDIESLEHEPNVPMPIPHGNKNSVSENAIPIVTLSKNQTLHMKLIATKGIGKMHA
A0A024VG55/48-175          TLAIDVVNVYENTSAFHDEFIAHRLGLIPIDSRNVNNYEFREKCKCKETCSKCTIQYIIEVKCNHSNKIDVSHYDIESLEHEPNVPMPIPHGNKNSVSENAIPIVTLSKNQTLHMKLIATKGIGKMHA
W7FZK9/48-175              TLAIDVVNVYENTSAFHDEFIAHRLGLIPIDSRNVNNYEFREKCKCKETCSKCTIQYIIEVKCNHSNKIDVSHYDIESLEHEPNVPMPIPHGNKNSVSENAIPIVTLSKNQTLHMKLIATKGIGKMHA
A0A0L0D007/28-155          TLAIDVVNVYENTSAFHDEFIAHRLGLIPIDSRNVNNYEFREKCKCKETCSKCTIQYIIEVKCNHSNKIDVSHYDIESLEHEPNVPMPIPHGNKNSVSENAIPIVTLSKNQTLHMKLIATKGIGKMHA
A0A060RXG7/48-175          TLAIDVVNVYENTSAFHDEFIAHRLGLIPIDSRNVNNYEFREKCKCKETCSKCTIQYIIEVKCNHSNKIDVSHYDIESLEHEPNVPMPIPHGNKNSVSENAIPIVTLSKNQTLHMKLIATKGIGKMHA
#=GC scorecons             99999999999999699997699999999999999999999999999999999999979999995599997999999997999979999999699633999999999999999999999999999999
#=GC scorecons_70          **************_*************************************************__**************************_**___******************************
#=GC scorecons_80          **************_*****_************************************_******__****_********_************_**___******************************
#=GC scorecons_90          **************_****__************************************_******__****_********_****_*******_**___******************************
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