# STOCKHOLM 1.0 #=GF ID 2.170.120.12/FF/000010 #=GF DE Related to RPB3-DNA-directed RNA polymerase II chain #=GF AC 2.170.120.12/FF/000010 #=GF TP FunFam #=GF DR CATH: v4.3 #=GF DR DOPS: 72.626 #=GS E3JPW7/56-190 AC E3JPW7 #=GS E3JPW7/56-190 OS Puccinia graminis f. sp. tritici CRL 75-36-700-3 #=GS E3JPW7/56-190 DE Uncharacterized protein #=GS E3JPW7/56-190 DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Pucciniomycotina; Pucciniomycetes; Pucciniales; Pucciniaceae; Puccinia; Puccinia graminis; #=GS A0A0D1CPC3/49-192 AC A0A0D1CPC3 #=GS A0A0D1CPC3/49-192 OS Ustilago maydis 521 #=GS A0A0D1CPC3/49-192 DE Chromosome 9, whole genome shotgun sequence #=GS A0A0D1CPC3/49-192 DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Ustilaginomycotina; Ustilaginomycetes; Ustilaginales; Ustilaginaceae; Ustilago; Ustilago maydis; #=GS A9URC4/48-176 AC A9URC4 #=GS A9URC4/48-176 OS Monosiga brevicollis #=GS A9URC4/48-176 DE Predicted protein #=GS A9URC4/48-176 DR ORG; Eukaryota; Choanoflagellida; Salpingoecidae; Monosiga; Monosiga brevicollis; #=GS R9NYL7/49-192 AC R9NYL7 #=GS R9NYL7/49-192 OS Pseudozyma hubeiensis SY62 #=GS R9NYL7/49-192 DE Uncharacterized protein #=GS R9NYL7/49-192 DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Ustilaginomycotina; Ustilaginomycetes; Ustilaginales; Ustilaginaceae; Pseudozyma; Pseudozyma hubeiensis; #=GS V5F005/49-192 AC V5F005 #=GS V5F005/49-192 OS Kalmanozyma brasiliensis GHG001 #=GS V5F005/49-192 DE RNA polymerase II, subunit POLR2C/RPB3 #=GS V5F005/49-192 DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Ustilaginomycotina; Ustilaginomycetes; Ustilaginales; Ustilaginaceae; Kalmanozyma; Kalmanozyma brasiliensis; #=GS A0A0F7RRI7/49-192 AC A0A0F7RRI7 #=GS A0A0F7RRI7/49-192 OS Sporisorium scitamineum #=GS A0A0F7RRI7/49-192 DE Related to RPB3-DNA-directed RNA polymerase II chain #=GS A0A0F7RRI7/49-192 DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Ustilaginomycotina; Ustilaginomycetes; Ustilaginales; Ustilaginaceae; Sporisorium; Sporisorium scitamineum; #=GS M9LUN7/52-195 AC M9LUN7 #=GS M9LUN7/52-195 OS Moesziomyces antarcticus T-34 #=GS M9LUN7/52-195 DE RNA polymerase II, subunit POLR2C/RPB3 #=GS M9LUN7/52-195 DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Ustilaginomycotina; Ustilaginomycetes; Ustilaginales; Ustilaginaceae; Moesziomyces; Moesziomyces antarcticus; #=GS A0A077R5S7/49-192 AC A0A077R5S7 #=GS A0A077R5S7/49-192 OS Melanopsichium pennsylvanicum 4 #=GS A0A077R5S7/49-192 DE Related to RPB3-DNA-directed RNA polymerase II chain #=GS A0A077R5S7/49-192 DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Ustilaginomycotina; Ustilaginomycetes; Ustilaginales; Ustilaginaceae; Melanopsichium; Melanopsichium pennsylvanicum; #=GS A0A2S4UFC3/56-190 AC A0A2S4UFC3 #=GS A0A2S4UFC3/56-190 OS Puccinia striiformis #=GS A0A2S4UFC3/56-190 DE Uncharacterized protein #=GS A0A2S4UFC3/56-190 DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Pucciniomycotina; Pucciniomycetes; Pucciniales; Pucciniaceae; Puccinia; Puccinia striiformis; #=GS A0A180GCU4/56-190 AC A0A180GCU4 #=GS A0A180GCU4/56-190 OS Puccinia triticina 1-1 BBBD Race 1 #=GS A0A180GCU4/56-190 DE Uncharacterized protein #=GS A0A180GCU4/56-190 DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Pucciniomycotina; Pucciniomycetes; Pucciniales; Pucciniaceae; Puccinia; Puccinia triticina; #=GS A0A2N5SF40/56-190 AC A0A2N5SF40 #=GS A0A2N5SF40/56-190 OS Puccinia coronata var. avenae f. sp. avenae #=GS A0A2N5SF40/56-190 DE Uncharacterized protein #=GS A0A2N5SF40/56-190 DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Pucciniomycotina; Pucciniomycetes; Pucciniales; Pucciniaceae; Puccinia; Puccinia coronata; Puccinia coronata var. avenae; #=GS E7A332/49-192 AC E7A332 #=GS E7A332/49-192 OS Sporisorium reilianum SRZ2 #=GS E7A332/49-192 DE Related to RPB3-DNA-directed RNA polymerase II chain #=GS E7A332/49-192 DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Ustilaginomycotina; Ustilaginomycetes; Ustilaginales; Ustilaginaceae; Sporisorium; Sporisorium reilianum; #=GS I2FX38/49-192 AC I2FX38 #=GS I2FX38/49-192 OS Ustilago hordei Uh4857-4 #=GS I2FX38/49-192 DE Related to RPB3-DNA-directed RNA polymerase II chain #=GS I2FX38/49-192 DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Ustilaginomycotina; Ustilaginomycetes; Ustilaginales; Ustilaginaceae; Ustilago; Ustilago hordei; #=GS W3VJU8/52-195 AC W3VJU8 #=GS W3VJU8/52-195 OS Moesziomyces aphidis DSM 70725 #=GS W3VJU8/52-195 DE Uncharacterized protein #=GS W3VJU8/52-195 DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Ustilaginomycotina; Ustilaginomycetes; Ustilaginales; Ustilaginaceae; Moesziomyces; Moesziomyces aphidis; #=GS A0A1K0GSZ8/49-192 AC A0A1K0GSZ8 #=GS A0A1K0GSZ8/49-192 OS Ustilago bromivora #=GS A0A1K0GSZ8/49-192 DE Related to RPB3-DNA-directed RNA polymerase II chain #=GS A0A1K0GSZ8/49-192 DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Ustilaginomycotina; Ustilaginomycetes; Ustilaginales; Ustilaginaceae; Ustilago; Ustilago bromivora; #=GS A0A0L0V0S3/56-190 AC A0A0L0V0S3 #=GS A0A0L0V0S3/56-190 OS Puccinia striiformis f. sp. tritici PST-78 #=GS A0A0L0V0S3/56-190 DE Uncharacterized protein #=GS A0A0L0V0S3/56-190 DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Pucciniomycotina; Pucciniomycetes; Pucciniales; Pucciniaceae; Puccinia; Puccinia striiformis; #=GS A0A2S4VT74/63-197 AC A0A2S4VT74 #=GS A0A2S4VT74/63-197 OS Puccinia striiformis #=GS A0A2S4VT74/63-197 DE Uncharacterized protein #=GS A0A2S4VT74/63-197 DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Pucciniomycotina; Pucciniomycetes; Pucciniales; Pucciniaceae; Puccinia; Puccinia striiformis; #=GS A0A081CFT5/52-195 AC A0A081CFT5 #=GS A0A081CFT5/52-195 OS Moesziomyces antarcticus #=GS A0A081CFT5/52-195 DE Insert subdomain of RNA polymerase alpha subunit #=GS A0A081CFT5/52-195 DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Ustilaginomycotina; Ustilaginomycetes; Ustilaginales; Ustilaginaceae; Moesziomyces; Moesziomyces antarcticus; #=GS A0A2N8UFP4/49-192 AC A0A2N8UFP4 #=GS A0A2N8UFP4/49-192 OS Sporisorium reilianum f. sp. reilianum #=GS A0A2N8UFP4/49-192 DE Related to RPB3-DNA-directed RNA polymerase II chain #=GS A0A2N8UFP4/49-192 DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Ustilaginomycotina; Ustilaginomycetes; Ustilaginales; Ustilaginaceae; Sporisorium; Sporisorium reilianum; #=GF SQ 19 E3JPW7/56-190 TIAIHSVEFEENTSVLPDEMIAHRLGLIPLISEDLDKYLKNWQRDCT-CLSYCDDCSIELVLSTKCTLVGDVLAVNSHDLVITPREDGA--------------HRGDVGKPYQFTMPGGEQPGVLITKLRKGQEVRLKCRAIKGIGQEHA A0A0D1CPC3/49-192 TVAIDMVEIRNNTTVLPDEMLAHRLGMVPLLSMDCAKALVD-HRDCA-CEDGCDRCSVELTLRARCTTRG-NLEVTSRDLIRSDTIENATIYDDDAMAEPAAPKHPDFGRPVGH---DGSIAPIMLVKMSKGQELDIRCIARKGFAKEHA A9URC4/48-176 TMAIDAVHIAKNTSVLHDEFLAHRLGLIPLTSEAADKFY--YPRDCTLCEMGCDHCQVMLTLDVEGHTEE-PTHVTTDDLISQAAGDFM------------------AVKPISAREESNIRNPIVICKLAKGQRIQLTAFAKKGFGKEHA R9NYL7/49-192 TVAIDMVEIRNNTTVLPDEMLAHRLGMIPLLSMDCAKALVD-HRDCA-CEDGCDRCSVELTLRARCTTRG-NLEVTSRDLIRSDTIESATIYDDDAMNEPSAPKHPDFGRPVGH---DGSIPPIMLVKMSKGQELDIRCIARKGFAKEHA V5F005/49-192 TVAIDMVEIRNNTTVLPDEFLAHRLGLVPLLSMDCAKALVD-HRDCA-CEDGCDRCSVELTLRARCTTRG-NLEVTSRDLIRSDTIENATIYDDDAMNDPAAPKHPDFGRPIGH---DGSTPPIMLVKMSKGQELDIRCIARKGFAKEHA A0A0F7RRI7/49-192 TVAIDMVEVRNNTTVLPDEFLAHRLGMIPLLSMDCAKALVD-HRDCA-CEDGCDRCSVELTLRARCTTRG-NLEVTSRDLIRSDTIENATICDDDAMAEPAAPKHPDFGRPVGH---DGSTPPIMLVKMSKGQELDVRCIARKGFAKEHA M9LUN7/52-195 TVAIDMVEIRNNTTVLPDEFLAHRLGLIPLLSMDCAKALVD-HRDCA-CEDGCDRCSVELTLRARCTTRG-NLEVTSRDLIRSDSIEGAQMFDDDAMNEPAAPKHPDFGRPVGH---DGSMAPIMLVKMSKGQELDIRCIARKGFAKEHA A0A077R5S7/49-192 TVAIDMVEIRNNTTVLPDEFLAHRLGMVPLLSMDCAKALVD-HRDCA-CEDGCDRCSVELTLRARCTTRG-NLEVTSRDLIRSDTIENATIYDDDAMTEPAAPKHPDFGRPVGH---DGSIPPIMLVKMSKGQELHIRCIARKGFAKEHA A0A2S4UFC3/56-190 TIAIHSVEFEENTSVLPDEMIAHRLGLIPLISEDLDKYLKNWQRDCT-CLSYCDDCSIELVLSTKCTQVGETVHVTSLDLVITPREDGA--------------DRGDVGKPVLFTLPGGEQPGVLITKLRKGQEVRLKCRAIKGIGQEHA A0A180GCU4/56-190 TIAIHSVEFEENTSVLPDEMIAHRLGLIPLISEDLDKYLKNWQRDCT-CLSYCDDCSIELVLSTKCTMIGETLPVTSKDLVITPREDGA--------------HRGDVGKPFQFTMPNGEQPGVLITKLRKGQEVRLKCRAIKGIGQEHA A0A2N5SF40/56-190 TIAIHSVEFEENTSVLPDEMIAHRLGLIPLISEDLDKYLKNWQRDCT-CLSYCDDCSIELVLSTKCTLVGETLAVTSQDLVITPREDGA--------------HRGDVGKPVQFTCPGGEQPGVLITKLRRGQEVRLKCRAIKGIGQEHA E7A332/49-192 TVAIDMVEVRNNTTVLPDEFLAHRLGMIPLLSMDCAKALVD-HRDCA-CEDGCDRCSVELTLRARCTTRG-NLEVTSRDLIRSDTIESATIYDDDAMAEPAAPKHPDFGRPVGH---DGSTPPIMLVKMSKGQELDLRCIARKGFAKEHA I2FX38/49-192 TVAIDMVEIRNNTTVLPDEFLAHRLGMVPLLSMDCSKALVD-HRDCA-CEDGCDRCSVELTLRARCTTRG-NLEVTSRDLIRSDTIENATIYDDDAMNEPAAPKHPDFGRPVGH---DGSIPPIMLVKMSKGQELDIRCIARKGFAKEHA W3VJU8/52-195 TVAIDMVEIRNNTTVLPDEFLAHRLGLIPLLSMDCAKALVD-HRDCA-CEDGCDRCSVELTLRARCTTRG-NLEVTSRDLIRSDSIEGAQMFDDDAMNEPAAPKHPDFGRPVGH---DGSMAPIMLVKMSKGQELDIRCIARKGFAKEHA A0A1K0GSZ8/49-192 TVAIDMVEIRNNTTVLPDEFLAHRLGMVPLLSMDCSKALVD-HRDCA-CEDGCDRCSVELTLRARCTTRG-NLEVTSRDLIRSDTIENATIYDDDAMNEPAAPKHPDFGRPVGH---DGSIPPIMLVKMSKGQELDIRCIARKGFAKEHA A0A0L0V0S3/56-190 TIAIHSVEFEENTSVLPDEMIAHRLGLIPLISEDLDKYLKNWQRDCT-CLSYCDDCSIELVLSTKCTQVGETVHVTSLDLVITPREDGA--------------DRGDVGKPVLFTLPGGEQPGVLITKLRKGQEVRLKCRAIKGIGQEHA A0A2S4VT74/63-197 TIAIHSVEFEENTSVLPDEMIAHRLGLIPLISEDLDKYLKNWQRDCT-CLSYCDDCSIELVLSTKCTQVGETVHVTSLDLVITPREDGA--------------DRGDVGKPVLFTLPGGEQPGVLITKLRKGQEVRLKCRAIKGIGQEHA A0A081CFT5/52-195 TVAIDMVEIRNNTTVLPDEFLAHRLGLIPLLSMDCSKALVD-HRDCA-CEDGCDRCSVELTLRARCTTRG-NLEVTSRDLIRSDSIEGAQMYDDDAMNEPAAPKHPDFGRPVGH---DGSMAPIMLVKMSKGQELDIRCIARKGFAKEHA A0A2N8UFP4/49-192 TVAIDMVEVHNNTTVLPDEFLAHRLGMIPLLSMDCAKALVD-HRDCA-CEDGCDRCSVELTLRARCTTRG-NLEVTSRDLIRSDTIESATIYDDDAMAEPAAPKHPDFGRPVGH---DGSTPPIMLVKMSKGQELDLRCIARKGFAKEHA #=GC scorecons 969955975459969979956999997799594745947351699960945499597779594567744715649874997454447471112222211212245475779635101574365766596589976466749499566999 #=GC scorecons_70 ****__**___**_*****_**********_*_*__*_*____****_*___**_*****_*__***__*__*_***_***_____*_*_________________*_****______*__*_*_*_**_****__*_*_*_**__**** #=GC scorecons_80 *_**__**___**_*****__*****_***_*_*__*_*____***__*___**_**_**_*___**__*____***_**________*_________________*_*_*_______*________*__****____*_*_**___*** #=GC scorecons_90 *_**__*____**_**_**__*****__**_*____*______***__*___**_*___*_*____________**__**______________________________*________________*__***_______*_**___*** //