# STOCKHOLM 1.0
#=GF ID 2.130.10.10/FF/000893
#=GF DE Dynein intermediate chain 1
#=GF AC 2.130.10.10/FF/000893
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 79.618
#=GS Q4QAV3/262-467      AC Q4QAV3
#=GS Q4QAV3/262-467      OS Leishmania major
#=GS Q4QAV3/262-467      DE Dynein intermediate-chain-like protein
#=GS Q4QAV3/262-467      DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leishmania; Leishmania; Leishmania major species complex; Leishmania major; 
#=GS Q4QAV3/262-467      DR GO; GO:0003774; GO:0005856; GO:0005930; GO:0007018; GO:0030286; GO:0043056; GO:0060294; 
#=GS D6WSR8/319-500      AC D6WSR8
#=GS D6WSR8/319-500      OS Tribolium castaneum
#=GS D6WSR8/319-500      DE Dynein intermediate chain 2, ciliary-like Protein
#=GS D6WSR8/319-500      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Coleoptera; Polyphaga; Cucujiformia; Tenebrionoidea; Tenebrionidae; Tribolium; Tribolium castaneum; 
#=GS F7B0J8/272-434      AC F7B0J8
#=GS F7B0J8/272-434      OS Ciona intestinalis
#=GS F7B0J8/272-434      DE Uncharacterized protein
#=GS F7B0J8/272-434      DR ORG; Eukaryota; Metazoa; Chordata; Tunicata; Ascidiacea; Enterogona; Phlebobranchia; Cionidae; Ciona; Ciona intestinalis; 
#=GS Q385R8/255-431      AC Q385R8
#=GS Q385R8/255-431      OS Trypanosoma brucei brucei TREU927
#=GS Q385R8/255-431      DE Dynein intermediate chain, putative
#=GS Q385R8/255-431      DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Trypanosoma; Trypanozoon; Trypanosoma brucei; Trypanosoma brucei brucei; 
#=GS Q385R8/255-431      DR GO; GO:0003774; GO:0005856; GO:0005930; GO:0007018; GO:0030286; GO:0043056; GO:0060294; 
#=GS F6Q9W1/296-462      AC F6Q9W1
#=GS F6Q9W1/296-462      OS Ornithorhynchus anatinus
#=GS F6Q9W1/296-462      DE Dynein axonemal intermediate chain 1
#=GS F6Q9W1/296-462      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Monotremata; Ornithorhynchidae; Ornithorhynchus; Ornithorhynchus anatinus; 
#=GS A0A1G4I3N6/255-431  AC A0A1G4I3N6
#=GS A0A1G4I3N6/255-431  OS Trypanosoma equiperdum
#=GS A0A1G4I3N6/255-431  DE Dynein intermediate chain 1, axonemal
#=GS A0A1G4I3N6/255-431  DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Trypanosoma; Trypanozoon; Trypanosoma equiperdum; 
#=GS E9AWL7/262-472      AC E9AWL7
#=GS E9AWL7/262-472      OS Leishmania mexicana MHOM/GT/2001/U1103
#=GS E9AWL7/262-472      DE Dynein intermediate-chain-like protein
#=GS E9AWL7/262-472      DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leishmania; Leishmania; Leishmania mexicana species complex; Leishmania mexicana; 
#=GS E9AH39/262-462      AC E9AH39
#=GS E9AH39/262-462      OS Leishmania infantum
#=GS E9AH39/262-462      DE Dynein intermediate-chain-like protein
#=GS E9AH39/262-462      DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leishmania; Leishmania; Leishmania donovani species complex; Leishmania infantum; 
#=GS D0A6Z5/255-431      AC D0A6Z5
#=GS D0A6Z5/255-431      OS Trypanosoma brucei gambiense DAL972
#=GS D0A6Z5/255-431      DE Dynein intermediate chain, putative
#=GS D0A6Z5/255-431      DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Trypanosoma; Trypanozoon; Trypanosoma brucei; Trypanosoma brucei gambiense; 
#=GS A0A3L6KR36/255-431  AC A0A3L6KR36
#=GS A0A3L6KR36/255-431  OS Trypanosoma brucei equiperdum
#=GS A0A3L6KR36/255-431  DE Dynein intermediate chain 1
#=GS A0A3L6KR36/255-431  DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Trypanosoma; Trypanozoon; Trypanosoma brucei; Trypanosoma brucei equiperdum; 
#=GS A0A3Q8ICR4/262-466  AC A0A3Q8ICR4
#=GS A0A3Q8ICR4/262-466  OS Leishmania donovani
#=GS A0A3Q8ICR4/262-466  DE Dynein intermediate chain 1, axonemal
#=GS A0A3Q8ICR4/262-466  DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leishmania; Leishmania; Leishmania donovani species complex; Leishmania donovani; 
#=GS H2YH10/309-467      AC H2YH10
#=GS H2YH10/309-467      OS Ciona savignyi
#=GS H2YH10/309-467      DE Uncharacterized protein
#=GS H2YH10/309-467      DR ORG; Eukaryota; Metazoa; Chordata; Tunicata; Ascidiacea; Enterogona; Phlebobranchia; Cionidae; Ciona; Ciona savignyi; 
#=GS E9BGN9/262-466      AC E9BGN9
#=GS E9BGN9/262-466      OS Leishmania donovani BPK282A1
#=GS E9BGN9/262-466      DE Dynein intermediate-chain-like protein
#=GS E9BGN9/262-466      DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leishmania; Leishmania; Leishmania donovani species complex; Leishmania donovani; 
#=GS H2YH09/283-444      AC H2YH09
#=GS H2YH09/283-444      OS Ciona savignyi
#=GS H2YH09/283-444      DE Uncharacterized protein
#=GS H2YH09/283-444      DR ORG; Eukaryota; Metazoa; Chordata; Tunicata; Ascidiacea; Enterogona; Phlebobranchia; Cionidae; Ciona; Ciona savignyi; 
#=GS A0A1W2WHQ5/295-455  AC A0A1W2WHQ5
#=GS A0A1W2WHQ5/295-455  OS Ciona intestinalis
#=GS A0A1W2WHQ5/295-455  DE dynein intermediate chain 2, ciliary
#=GS A0A1W2WHQ5/295-455  DR ORG; Eukaryota; Metazoa; Chordata; Tunicata; Ascidiacea; Enterogona; Phlebobranchia; Cionidae; Ciona; Ciona intestinalis; 
#=GF SQ 15
Q4QAV3/262-467              VNQNDCHDIIDDFKYWEDQSDCY-KEDGTLLPLWRFFTEKTRKKAVTAIALNGRYSDLFAVGYGSYDFLKP-CKGTVHCFTLKNAVPTGSGAPVPAHPEFSFHLDCGVLCLAFHPREHSLLACGLYDGSVCVFDMRVSSHDAGGANHGRPLYRANVRTGKHMDPVWQIMWMESTSE--LSFYSISTDGRVANWMLRKRELTSRDVLKLST-----
D6WSR8/319-500              -------DIAKDYRYWEDPSDEFRDEEGTLLPLWKFHYDKTRKNTVTDIEWNPHYYDLFAVCFGFLDFMKPLEEGAVCLFTLKN----------PSFPDYICMTDSAVMCVDTHPKYPYMVVIGLYDGSVSVYNVQA--------TCKQPAFRSNNVTNKHRGIVWEVKWAPDLPDGEMNFYSVSEDGKINNWVLMQNDLAVTTIIT--------
F7B0J8/272-434              -----------------------RDQEGTLLPLWKFSFDKAKRLAVTSICWNPKYVDMFVVGHGSYDFTKQ-GRGMLLFYTLKN----------PSHPEYIYSTESGVMCLDIHPIYQYLVCVGFYDGSVGVFNTQE--------KRPGPVYKSTAKSGKHTDPVWQVKWQKDDLDNNLNLYSVSSDGRVVSWTLVKDELIYADV----------
Q385R8/255-431              ------------------------KEDGNLLPLWQFFTNKVKHRAVTSIALNNRYKDLFAVGFGSYDFQRQ-GKGAIHCFTLKNTVPTVPNSPLPAHPEMSFTVSSGVMCLSFHPVETSLLACGLYDGSVCVFDLRM--HDK-PKEEAKQICQATVRSGKHTEPVWEVQWCRSTVD--LRFYSISTDGRITSWSLQKKELIFKDVMK--------
F6Q9W1/296-462              ---------------------EYRDQEGTLLPLWKFQYDKAKRLAVTALSWNPKYKDLFAVGHGSYDFLKQ-NRGMILLYTLKN----------PSFPEFIFGCESGIMCLDMHADHPYLIAVGQYDGNVAIYNLKK-------PPLSQPAYKSSAKSGKHSDPVWQVKWQKDDIDHNLNFFSISSDGRIVSWTLVKNELLHSDVI---------
A0A1G4I3N6/255-431          ------------------------KEDGNLLPLWQFFTNKVKHRAVTSIALNNRYKDLFAVGFGSYDFQRQ-GKGAIHCFTLKNTVPTVPNSPLPAHPEMSFTVSSGVMCLSFHPVETSLLACGLYDGSVCVFDLRM--HDK-PKEEAKQICQATVRSGKHTEPVWEVQWCRSTVD--LRFYSISTDGRITSWSLQKKELIFKDVMK--------
E9AWL7/262-472              VNQNDCHDIIDDFKYWEDQSDLY-KEDGTLLPLWRFFTEKTRKKAVTAIALSGRYPDLFAVGYGSYDFLKP-SKGTVHFFTLKNAVPTGSGAPVPAHPEFSFHLDCGVLCIAFHPREHALLACGLYDGSVCVFDMRVSTHDAGGANHARPLYRANVRTGKHMDPVWQIMWMESTLE--LSFYSISTDGRVANWMLNKRELTSRDVLRLNTGVCTA
E9AH39/262-462              VNQNDCQDIIDDFKYWEDQSDLY-KEDGTLLPLWRFFTEKTRKKAVTAIALNGRYSDLFAVGYGSYDFLKP-CKGTVHCFTLKNAVPTGSGAPVPAHPEFSFHLDCGVLCLAFHPREHSLLACGLYDGSVCVFDMRVSSHDTGSANHGRPLYRANVRTGKHMDPVWQIMWMESTPE--LSFYSISTDGRVANWMLSKRELTSRDV----------
D0A6Z5/255-431              ------------------------KEDGNLLPLWQFFTNKVKHRAVTSIALNNRYKDLFAVGFGSYDFQRQ-GKGAIHCFTLKNTVPTVPNSPLPAHPEMSFTVSSGVMCLSFHPVETSLLACGLYDGSVCVFDLRM--HDK-PKEEAKQICQATVRSGKHTEPVWEVQWCRSTVD--LRFYSISTDGRITSWSLQKKELIFKDVMK--------
A0A3L6KR36/255-431          ------------------------KEDGNLLPLWQFFTNKVKHRAVTSIALNNRYKDLFAVGFGSYDFQRQ-GKGAIHCFTLKNTVPTVPNSPLPAHPEMSFTVSSGVMCLSFHPVETSLLACGLYDGSVCVFDLRM--HDK-PKEEAKQICQATVRSGKHTEPVWEVQWCRSTVD--LRFYSISTDGRITSWSLQKKELIFKDVMK--------
A0A3Q8ICR4/262-466          VNQNDCQDIIDDFKYWEDQSDLY-KEDGTLLPLWRFFTEKTRKKAVTAIALNGRYSDLFAVGYGSYDFLKP-CKGTVHCFTLKNAVPTGSGAPVPAHPEFSFHLDCGVLCLAFHPREHSLLACGLYDGSVCVFDMRVSSHDTGGANHGRPLYRANVRTGKHMDPVWQIMWMESTPG--LSFYSISTDGRVANWMLSKRELTSRDVLKLN------
H2YH10/309-467              -------------------------QEGTLLPLWKFCYDKAKRLAVTSICWNPKYYDMFVVGHGSYDFTKQ-GRGMLLFYSLKN----------PSYPEYIYSTESGVMCIDVHPTYQYLVCVGFYDGSVGVFNIQE--------KRAGPVYKSNAKSGKHTDPVWQVKWQKDDLDNNLNFFSVSSDGRVVSWTLVKDELIYA------------
E9BGN9/262-466              VNQNDCQDIIDDFKYWEDQSDLY-KEDGTLLPLWRFFTEKTRKKAVTAIALNGRYSDLFAVGYGSYDFLKP-CKGTVHCFTLKNAVPTGSGAPVPAHPEFSFHLDCGVLCLAFHPREHSLLACGLYDGSVCVFDMRVSSHDTGGANHGRPLYRANVRTGKHMDPVWQIMWMESTPG--LSFYSISTDGRVANWMLSKRELTSRDVLKLN------
H2YH09/283-444              -------------------------QEGTLLPLWKFCYDKAKRLAVTSICWNPKYYDMFVVGHGSYDFTKQ-GRGMLLFYSLKN----------PSYPEYIYSTESGVMCIDVHPTYQYLVCVGFYDGSVGVFNIQE--------KRAGPVYKSNAKSGKHTDPVWQVKWQKDDLDNNLNFFSVSSDGRVVSWTLVKDELIYADVI---------
A0A1W2WHQ5/295-455          -------------------------QEGTLLPLWKFSFDKAKRLAVTSICWNPKYVDMFVVGHGSYDFTKQ-GRGMLLFYTLKN----------PSHPEYIYSTESGVMCLDIHPIYQYLVCVGFYDGSVGVFNTQE--------KRPGPVYKSTAKSGKHTDPVWQVKWQKDDLDNNLNLYSVSSDGRVVSWTLVKDELIYADV----------
#=GC scorecons              00000001100111111101101036796999996944595753899584584693979697597799475046945447799912221111219669855634568879644983445865496999895886563002210114344656665566799467996749345446018477979599874694938489544672200000000
#=GC scorecons_70           _________________________*********_*___*_*__***_*__*_**_******_*****_*___**____*****__________*_***__*___******__**____*___*_*****_***_______________*_*______***_******_*_____*__*_*****_****__*_*_*_**___**__________
#=GC scorecons_80           ___________________________*_*****_*___*____***_*__*__*_***_**_*****_*____*____*****__________*__**_______**_*___**____*___*_*****_**_________________________***__***_*_*________*_*****_***___*_*_*_**_______________
#=GC scorecons_90           ___________________________*_*****_*___*____***_*__*__*_*_*_*__*__**______*______***__________*__**________*_*___**____*___*_*****_**__________________________**___**___*________*___*_*_***___*_*_*_**_______________
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