# STOCKHOLM 1.0
#=GF ID 2.130.10.10/FF/000717
#=GF DE Cilia- and flagella-associated protein 43
#=GF AC 2.130.10.10/FF/000717
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 24.229
#=GS Q8NDM7/258-388      AC Q8NDM7
#=GS Q8NDM7/258-388      OS Homo sapiens
#=GS Q8NDM7/258-388      DE Cilia- and flagella-associated protein 43
#=GS Q8NDM7/258-388      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Homo; Homo sapiens; 
#=GS Q8NDM7/258-388      DR GO; GO:0005930; GO:0007288; 
#=GS A0A0C4DFU9/188-319  AC A0A0C4DFU9
#=GS A0A0C4DFU9/188-319  OS Homo sapiens
#=GS A0A0C4DFU9/188-319  DE Cilia- and flagella-associated protein 43
#=GS A0A0C4DFU9/188-319  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Homo; Homo sapiens; 
#=GS Q5TA04/188-319      AC Q5TA04
#=GS Q5TA04/188-319      OS Homo sapiens
#=GS Q5TA04/188-319      DE Cilia- and flagella-associated protein 43
#=GS Q5TA04/188-319      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Homo; Homo sapiens; 
#=GS A0A2K5E5M4/258-388  AC A0A2K5E5M4
#=GS A0A2K5E5M4/258-388  OS Aotus nancymaae
#=GS A0A2K5E5M4/258-388  DE Uncharacterized protein
#=GS A0A2K5E5M4/258-388  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Platyrrhini; Aotidae; Aotus; Aotus nancymaae; 
#=GS A0A0D9QYX9/258-388  AC A0A0D9QYX9
#=GS A0A0D9QYX9/258-388  OS Chlorocebus sabaeus
#=GS A0A0D9QYX9/258-388  DE Uncharacterized protein
#=GS A0A0D9QYX9/258-388  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Cercopithecoidea; Cercopithecidae; Cercopithecinae; Chlorocebus; Chlorocebus sabaeus; 
#=GS F7BUL9/258-388      AC F7BUL9
#=GS F7BUL9/258-388      OS Callithrix jacchus
#=GS F7BUL9/258-388      DE Cilia and flagella associated protein 43
#=GS F7BUL9/258-388      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Platyrrhini; Cebidae; Callitrichinae; Callithrix; Callithrix; Callithrix jacchus; 
#=GS G1RZF0/258-388      AC G1RZF0
#=GS G1RZF0/258-388      OS Nomascus leucogenys
#=GS G1RZF0/258-388      DE Uncharacterized protein
#=GS G1RZF0/258-388      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hylobatidae; Nomascus; Nomascus leucogenys; 
#=GS A0A2K5R3F4/258-388  AC A0A2K5R3F4
#=GS A0A2K5R3F4/258-388  OS Cebus capucinus imitator
#=GS A0A2K5R3F4/258-388  DE Uncharacterized protein
#=GS A0A2K5R3F4/258-388  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Platyrrhini; Cebidae; Cebinae; Cebus; Cebus capucinus; Cebus capucinus imitator; 
#=GS A0A2K5HIV5/258-388  AC A0A2K5HIV5
#=GS A0A2K5HIV5/258-388  OS Colobus angolensis palliatus
#=GS A0A2K5HIV5/258-388  DE Uncharacterized protein
#=GS A0A2K5HIV5/258-388  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Cercopithecoidea; Cercopithecidae; Colobinae; Colobus; Colobus angolensis; Colobus angolensis palliatus; 
#=GS H2NBI8/258-389      AC H2NBI8
#=GS H2NBI8/258-389      OS Pongo abelii
#=GS H2NBI8/258-389      DE Cilia and flagella associated protein 43
#=GS H2NBI8/258-389      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Ponginae; Pongo; Pongo abelii; 
#=GS A0A2K5VH82/258-388  AC A0A2K5VH82
#=GS A0A2K5VH82/258-388  OS Macaca fascicularis
#=GS A0A2K5VH82/258-388  DE Uncharacterized protein
#=GS A0A2K5VH82/258-388  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Cercopithecoidea; Cercopithecidae; Cercopithecinae; Macaca; Macaca fascicularis; 
#=GS A0A2K6L3M9/257-387  AC A0A2K6L3M9
#=GS A0A2K6L3M9/257-387  OS Rhinopithecus bieti
#=GS A0A2K6L3M9/257-387  DE Uncharacterized protein
#=GS A0A2K6L3M9/257-387  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Cercopithecoidea; Cercopithecidae; Colobinae; Rhinopithecus; Rhinopithecus bieti; 
#=GS A0A2K5Y112/258-388  AC A0A2K5Y112
#=GS A0A2K5Y112/258-388  OS Mandrillus leucophaeus
#=GS A0A2K5Y112/258-388  DE Uncharacterized protein
#=GS A0A2K5Y112/258-388  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Cercopithecoidea; Cercopithecidae; Cercopithecinae; Mandrillus; Mandrillus leucophaeus; 
#=GS A0A096P6I3/258-388  AC A0A096P6I3
#=GS A0A096P6I3/258-388  OS Papio anubis
#=GS A0A096P6I3/258-388  DE Uncharacterized protein
#=GS A0A096P6I3/258-388  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Cercopithecoidea; Cercopithecidae; Cercopithecinae; Papio; Papio anubis; 
#=GS A0A2K6PHB5/258-388  AC A0A2K6PHB5
#=GS A0A2K6PHB5/258-388  OS Rhinopithecus roxellana
#=GS A0A2K6PHB5/258-388  DE Uncharacterized protein
#=GS A0A2K6PHB5/258-388  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Cercopithecoidea; Cercopithecidae; Colobinae; Rhinopithecus; Rhinopithecus roxellana; 
#=GS A0A2K6DJV3/258-388  AC A0A2K6DJV3
#=GS A0A2K6DJV3/258-388  OS Macaca nemestrina
#=GS A0A2K6DJV3/258-388  DE Uncharacterized protein
#=GS A0A2K6DJV3/258-388  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Cercopithecoidea; Cercopithecidae; Cercopithecinae; Macaca; Macaca nemestrina; 
#=GS G7PDX1/236-367      AC G7PDX1
#=GS G7PDX1/236-367      OS Macaca fascicularis
#=GS G7PDX1/236-367      DE Uncharacterized protein
#=GS G7PDX1/236-367      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Cercopithecoidea; Cercopithecidae; Cercopithecinae; Macaca; Macaca fascicularis; 
#=GS A0A2K5E5X1/196-326  AC A0A2K5E5X1
#=GS A0A2K5E5X1/196-326  OS Aotus nancymaae
#=GS A0A2K5E5X1/196-326  DE Uncharacterized protein
#=GS A0A2K5E5X1/196-326  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Platyrrhini; Aotidae; Aotus; Aotus nancymaae; 
#=GS U3CAQ7/258-388      AC U3CAQ7
#=GS U3CAQ7/258-388      OS Callithrix jacchus
#=GS U3CAQ7/258-388      DE WD repeat-containing protein 96
#=GS U3CAQ7/258-388      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Platyrrhini; Cebidae; Callitrichinae; Callithrix; Callithrix; Callithrix jacchus; 
#=GF SQ 19
Q8NDM7/258-388              MHCWTPTSDLYIGCEEGHLLMINGDTLQVTVLNKIEEESPL-D-RRNFISPVTLVYQKEGVLASGIDGFVYSFIIKDRSYMIEDFLEIERPVEHMTFSPNYTVLLIQTDKGSVYIYTFGKEPTLNKVLDACDG
A0A0C4DFU9/188-319          MHCWTPTSDLYIGCEEGHLLMINGDTLQVTVLNKIEEESPLED-RRNFISPVTLVYQKEGVLASGIDGFVYSFIIKDRSYMIEDFLEIERPVEHMTFSPNYTVLLIQTDKGSVYIYTFGKEPTLNKVLDACDG
Q5TA04/188-319              MHCWTPTSDLYIGCEEGHLLMINGDTLQVTVLNKIEEESPLED-RRNFISPVTLVYQKEGVLASGIDGFVYSFIIKDRSYMIEDFLEIERPVEHMTFSPNYTVLLIQTDKGSVYIYTFGKEPTLNKVLDACDG
A0A2K5E5M4/258-388          MHCWTPTSDLYIGCEEGHLLVINGDTLKVTVLNKIEEESPL-D-RRNFISPVTLVYQKEGVLASGIDGFVYSFIIKDGSYMIEDFLEIERPVEHMMFSPNYTMLLIQTDKGSVYIYTFGEKPILNKVLDACDG
A0A0D9QYX9/258-388          MHCWTPTSDLYIGCEEGHLLMINGDTLKVTVLNKIEEESPL-D-RRTFISPVTLVYQKEGVLASGIDGFVYSFVIKDGSYMIKDFLEIERPVEHMTFSPNYTMLLIQTDKGSVYIYTFGEEPTLNKVLDACDG
F7BUL9/258-388              MHCWTPTSDLYIGCEEGHLLVINGDTLKVTVLNKIEEESPS-D-RRNFISPVTLVYQKEGMLASGIDGFVYSFIIKDGSYMIEDFLEIERPVEHMIFSPNYTMLLIQTDKGSVYIYTFGEKPILSKVLDACDG
G1RZF0/258-388              MHCWTPTSDLYVGCEEGHLLMINGDTLKVTVLNKIEEESPL-D-RRNFISPVTLVYQKEGVLASGIDGFVYSFIIKDRSYTIEDFLEIERPVEHMTFSPNYTMLLIQTDKGSVYIYTFGKEPTLNKVLDACDG
A0A2K5R3F4/258-388          MHCWTPTSDLYIGCEEGHLLVINGDTLKVTVLNKIEEESPL-D-RRNFISPVTLVYQKEGVLASGIDGFVYSFIIKDGSYVIEDFLEIERPVEHMMFSPNYTMLLIQTDKGSVYIYTLGEKPILNKVLDACDG
A0A2K5HIV5/258-388          MHCWTPTSDLYIGCEEGHLLMINGDTLKVTVLNKLEEESPL-D-RRNFISPVTLVYQKEGMLASGIDGFVYSFIIKDGSYVIKDFLEIERPVGHMTFSPNYTMLLIQTDKGSVYIYTFGEEPTLNKVLDACDG
H2NBI8/258-389              MHCWTPTSDLYIGCEEGHLLMVNGDTLKVTVLNKIEEESPLED-RRNFISPVTLVYQKEGVLASGIDGFVYSFIIKDRSYMIEDFLEIERPVEHMTFSPNYTMLLIQTDKGSVYIYTFGKEPTLNKVLDACDG
A0A2K5VH82/258-388          MHCWTPTSDLYIGCEEGHLLMINGDTLKVTVLNKIEEESPL-G-RRNFISPVTLVYQKEGVLASGIDGFVYSFIIKDGSYMIKDFLEIERPVEHMTFSPNYTMLLIQTDKGSVYIYTFGEEPTLNKVLDACDG
A0A2K6L3M9/257-387          MHCWTPTSDLYIGCEEGHLLMINGDTLKVTMLNKLEEESPL-D-RRNFISPVTLVYQKEGVLASGIDGFVYSFIIKDGSYVIKNFLEIERPVEHMTFSPNYTMFLIQTDKGSVYIYTFGEEPTLNKVLDACDG
A0A2K5Y112/258-388          MHCWTPTSDLYIGCEEGHLLMINGDTLKVTVLNKIEEESPL-D-RRNFISPVTLVYQKEGMLASGIDGFVYSFIIKDGSYMIKDFLEIERPVEHMTFSPNYTMLLIQTDKGSVYIYTFGEEPTLNKVLDACDG
A0A096P6I3/258-388          MHCWTPTSDLYIGCEEGHLLMINGDTLKVTVLNKIEEESPL-V-RRNFISPVTLVYQKEGVLASGIDGFVYSFIIKDGSYMIKDFLEIERPVEHMTFSPNYTMLLIQTDKGSVYIYTFGEEPTLNKVLDACDG
A0A2K6PHB5/258-388          MHCWTSTSDLYIGCEEGHLLMINGDTLKVTVLNKLEEESPL-D-RRNFISPVTLVYQKEGVLASGIDGFVYSFIIKDGSYVIKNFLEIERPVEHMTFSPNYTMFLIQTDKGSVYIYTFGEEPTLNKVLDACDG
A0A2K6DJV3/258-388          MHCWTPTSDLYIGCEEGHLLMINGDTLKVTVLNKIEEESPL-G-RRNFLSPVTLVYQKEGVLASGIDGFVYSFIIKDGSYMIKDFLEIERPVEHMTFSPNYTMLLIQTDKGSVYIYTFGEEPTLNKVLDACDG
G7PDX1/236-367              MHCWTPTSDLYIGCEEGHLLMINGDTLKVTVLNKIEEESPL-EGRRNFISPVTLVYQKEGVLASGIDGFVYSFIIKDGSYMIKDFLEIERPVEHMTFSPNYTMLLIQTDKGSVYIYTFGEEPTLNKVLDACDG
A0A2K5E5X1/196-326          MHCWTPTSDLYIGCEEGHLLVINGDTLKVTVLNKIEEESPL-D-RRNFISPVTLVYQKEGVLASGIDGFVYSFIIKDGSYMIEDFLEIERPVEHMMFSPNYTMLLIQTDKGSVYIYTFGEKPILNKVLDACDG
U3CAQ7/258-388              MHCWTPTSDLYIGCEEGHLLVINGDTLKVTVLNKIEEESPS-D-RRNFISPVTLVYQKEGMLASGIDGFVYSFIIKDGSYMIEDFLEIERPVEHMIFSPNYTMLLIQTDKGSVYIYTFGEKPILSKVLDACDG
#=GC scorecons              9999989999989999999968999997998999799999707099898999999999997999999999999899969969679999999989969999997799999999999998966969799999999
#=GC scorecons_70           *****************************************_*_**************************************_**************************************************
#=GC scorecons_80           ********************_********************___*********************************_**_*_************_***********************__*_**********
#=GC scorecons_90           ********************_******_******_*****____****************_****************_**_*__***********_******__***************__*_*_********
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