# STOCKHOLM 1.0 #=GF ID 2.10.25.10/FF/000740 #=GF DE Low-density lipoprotein receptor domain class A #=GF AC 2.10.25.10/FF/000740 #=GF TP FunFam #=GF DR CATH: v4.3 #=GF DR DOPS: 79.858 #=GS Q04833/3268-3308 AC Q04833 #=GS Q04833/3268-3308 OS Caenorhabditis elegans #=GS Q04833/3268-3308 DE Low-density lipoprotein receptor-related protein #=GS Q04833/3268-3308 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis elegans; #=GS Q04833/3268-3308 DR GO; GO:0002119; GO:0005515; GO:0015248; GO:0015918; GO:0016324; GO:0030139; GO:0030334; GO:0040017; GO:0040018; GO:0042395; #=GS O44191/345-379 AC O44191 #=GS O44191/345-379 OS Caenorhabditis elegans #=GS O44191/345-379 DE Receptor Mediated Endocytosis #=GS O44191/345-379 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis elegans; #=GS O44191/345-379 DR GO; GO:0005041; GO:0005886; GO:0005887; GO:0009792; GO:0010008; GO:0030728; GO:0031410; GO:0048599; #=GS V6CIR8/266-300 AC V6CIR8 #=GS V6CIR8/266-300 OS Caenorhabditis elegans #=GS V6CIR8/266-300 DE Receptor Mediated Endocytosis #=GS V6CIR8/266-300 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis elegans; #=GS H9GLL5/262-307 AC H9GLL5 #=GS H9GLL5/262-307 OS Anolis carolinensis #=GS H9GLL5/262-307 DE Uncharacterized protein #=GS H9GLL5/262-307 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Lepidosauria; Squamata; Iguania; Dactyloidae; Anolis; Anolis carolinensis; #=GS A0A0N4XHZ6/224-265 AC A0A0N4XHZ6 #=GS A0A0N4XHZ6/224-265 OS Nippostrongylus brasiliensis #=GS A0A0N4XHZ6/224-265 DE LpR2 (inferred by orthology to a D. melanogaster protein) #=GS A0A0N4XHZ6/224-265 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Strongylida; Trichostrongyloidea; Heligmonellidae; Nippostrongylinae; Nippostrongylus; Nippostrongylus brasiliensis; #=GS W5M0N1/271-311 AC W5M0N1 #=GS W5M0N1/271-311 OS Lepisosteus oculatus #=GS W5M0N1/271-311 DE CD248 molecule, endosialin a #=GS W5M0N1/271-311 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Holostei; Semionotiformes; Lepisosteidae; Lepisosteus; Lepisosteus oculatus; #=GS A0A016S358/3276-3317 AC A0A016S358 #=GS A0A016S358/3276-3317 OS Ancylostoma ceylanicum #=GS A0A016S358/3276-3317 DE Uncharacterized protein #=GS A0A016S358/3276-3317 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Strongylida; Ancylostomatoidea; Ancylostomatidae; Ancylostomatinae; Ancylostoma; Ancylostoma ceylanicum; #=GS A0A158PDM9/3198-3239 AC A0A158PDM9 #=GS A0A158PDM9/3198-3239 OS Angiostrongylus costaricensis #=GS A0A158PDM9/3198-3239 DE Uncharacterized protein #=GS A0A158PDM9/3198-3239 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Strongylida; Metastrongyloidea; Angiostrongylidae; Angiostrongylus; Angiostrongylus costaricensis; #=GS A0A2G9U0C9/1167-1208 AC A0A2G9U0C9 #=GS A0A2G9U0C9/1167-1208 OS Teladorsagia circumcincta #=GS A0A2G9U0C9/1167-1208 DE Low-density lipoprotein receptor domain class A #=GS A0A2G9U0C9/1167-1208 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Strongylida; Trichostrongyloidea; Haemonchidae; Teladorsagia; Teladorsagia circumcincta; #=GS A0A183FMT3/3206-3247 AC A0A183FMT3 #=GS A0A183FMT3/3206-3247 OS Heligmosomoides polygyrus bakeri #=GS A0A183FMT3/3206-3247 DE Uncharacterized protein #=GS A0A183FMT3/3206-3247 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Strongylida; Trichostrongyloidea; Heligmosomatidae; Heligmosomoides; Heligmosomoides polygyrus; Heligmosomoides polygyrus bakeri; #=GS A0A0D8YFX6/3292-3333 AC A0A0D8YFX6 #=GS A0A0D8YFX6/3292-3333 OS Dictyocaulus viviparus #=GS A0A0D8YFX6/3292-3333 DE Low-density lipoprotein receptor domain class A #=GS A0A0D8YFX6/3292-3333 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Strongylida; Trichostrongyloidea; Dictyocaulidae; Dictyocaulinae; Dictyocaulus; Dictyocaulus viviparus; #=GS W2SXR1/2885-2926 AC W2SXR1 #=GS W2SXR1/2885-2926 OS Necator americanus #=GS W2SXR1/2885-2926 DE Uncharacterized protein #=GS W2SXR1/2885-2926 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Strongylida; Ancylostomatoidea; Ancylostomatidae; Bunostominae; Necator; Necator americanus; #=GS A0A158P9R2/2986-3027 AC A0A158P9R2 #=GS A0A158P9R2/2986-3027 OS Angiostrongylus cantonensis #=GS A0A158P9R2/2986-3027 DE Uncharacterized protein #=GS A0A158P9R2/2986-3027 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Strongylida; Metastrongyloidea; Angiostrongylidae; Angiostrongylus; Angiostrongylus cantonensis; #=GS A8WWR1/348-382 AC A8WWR1 #=GS A8WWR1/348-382 OS Caenorhabditis briggsae #=GS A8WWR1/348-382 DE Protein CBR-RME-2 #=GS A8WWR1/348-382 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis briggsae; #=GS A0A2G5VFG2/376-411 AC A0A2G5VFG2 #=GS A0A2G5VFG2/376-411 OS Caenorhabditis nigoni #=GS A0A2G5VFG2/376-411 DE Uncharacterized protein #=GS A0A2G5VFG2/376-411 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis nigoni; #=GS A0A2G9UCP6/1038-1079 AC A0A2G9UCP6 #=GS A0A2G9UCP6/1038-1079 OS Teladorsagia circumcincta #=GS A0A2G9UCP6/1038-1079 DE Low-density lipoprotein receptor domain class A #=GS A0A2G9UCP6/1038-1079 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Strongylida; Trichostrongyloidea; Haemonchidae; Teladorsagia; Teladorsagia circumcincta; #=GS A0A2G5VFG1/343-378 AC A0A2G5VFG1 #=GS A0A2G5VFG1/343-378 OS Caenorhabditis nigoni #=GS A0A2G5VFG1/343-378 DE Uncharacterized protein #=GS A0A2G5VFG1/343-378 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis nigoni; #=GF SQ 17 Q04833/3268-3308 -NECYEGISG--CSQKCDDKI------GSYKCGCVDGYQLSSDDHSCK--RT O44191/345-379 -------THGHLCQHFCEDRL------GSFACKCANGYELETDGHSCK---- V6CIR8/266-300 -------THGHLCQHFCEDRL------GSFACKCANGYELETDGHSCK---- H9GLL5/262-307 ---CEGDNGG--CQQLCLDEADDDGVDGGYSCECHDGYYLLPDGHSCVD-EC A0A0N4XHZ6/224-265 VNECYEGISG--CSQTCEDKI------GSYKCGCVDGYQLGKDDHSCK--RT W5M0N1/271-311 ---CRRDNGG--CQHLCRAAD------AHYYCECLEGYELGADGQSCGPADA A0A016S358/3276-3317 VNECYEGISG--CSQTCEDKI------GSYKCGCVDGYLLARDDHSCK--RI A0A158PDM9/3198-3239 VNECYEGISG--CSQTCEDKI------GTYKCGCVDGYQLGKDDHSCK--RT A0A2G9U0C9/1167-1208 VNECYEGISG--CSQTCEDKI------GSYKCGCVEGYQLGKDDHSCK--RT A0A183FMT3/3206-3247 VNECYEGISG--CSQTCEDKI------GSYKCGCVDGYQLAKDDHSCK--RT A0A0D8YFX6/3292-3333 INECYEGISG--CSQTCEDKI------GSYKCGCVAGYQLAKDDHSCK--RT W2SXR1/2885-2926 VNECYEGISG--CSQTCEDKI------GSYKCGCVDGYQLSRDDHSCK--RT A0A158P9R2/2986-3027 VNECYEGISG--CSQTCEDKI------GAYKCGCVDGYQLGKDDHSCK--RT A8WWR1/348-382 -------TFGHICQHFCEDRL------GSYVCKCANGYELEDDGHSCK---- A0A2G5VFG2/376-411 ------ATHGHICQHFCEDRL------GSYVCKCANGYELEDDGHSCK---- A0A2G9UCP6/1038-1079 VNECYEGISG--CSQTCEDKI------GSYKCGCVEGYQLGKDDHSCK--RT A0A2G5VFG1/343-378 ------ATHGHICQHFCEDRL------GSYVCKCANGYELEDDGHSCK---- #=GC scorecons 1113223549009564967540000008683949459959439689960022 #=GC scorecons_70 _________*__*_*_*_*________*_*_*_*__**_*__*_****____ #=GC scorecons_80 _________*__*___*_*________*_*_*_*__**_*__*_***_____ #=GC scorecons_90 _________*__*___*____________*_*_*__**_*__*_***_____ //