# STOCKHOLM 1.0
#=GF ID 2.10.25.10/FF/000698
#=GF DE Blast:Prolow-density lipoprotein receptor-related protein 1
#=GF AC 2.10.25.10/FF/000698
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 80.509
#=GS A0A0B4KFD1/3063-3107  AC A0A0B4KFD1
#=GS A0A0B4KFD1/3063-3107  OS Drosophila melanogaster
#=GS A0A0B4KFD1/3063-3107  DE LDL receptor protein 1, isoform F
#=GS A0A0B4KFD1/3063-3107  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila melanogaster; 
#=GS A0A0B4KFD1/3063-3107  DR GO; GO:0005829; 
#=GS A1Z7C4/3037-3081      AC A1Z7C4
#=GS A1Z7C4/3037-3081      OS Drosophila melanogaster
#=GS A1Z7C4/3037-3081      DE LDL receptor protein 1, isoform G
#=GS A1Z7C4/3037-3081      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila melanogaster; 
#=GS A1Z7C4/3037-3081      DR GO; GO:0005829; 
#=GS C3Y569/112-156        AC C3Y569
#=GS C3Y569/112-156        OS Branchiostoma floridae
#=GS C3Y569/112-156        DE Uncharacterized protein
#=GS C3Y569/112-156        DR ORG; Eukaryota; Metazoa; Chordata; Cephalochordata; Branchiostomidae; Branchiostoma; Branchiostoma floridae; 
#=GS A0A1W4WAT3/3025-3069  AC A0A1W4WAT3
#=GS A0A1W4WAT3/3025-3069  OS Drosophila ficusphila
#=GS A0A1W4WAT3/3025-3069  DE low-density lipoprotein receptor-related protein 1 isoform X1
#=GS A0A1W4WAT3/3025-3069  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; ficusphila subgroup; Drosophila ficusphila; 
#=GS B4P2Q0/3038-3081      AC B4P2Q0
#=GS B4P2Q0/3038-3081      OS Drosophila yakuba
#=GS B4P2Q0/3038-3081      DE Uncharacterized protein
#=GS B4P2Q0/3038-3081      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila yakuba; 
#=GS A0A0J9R836/3038-3082  AC A0A0J9R836
#=GS A0A0J9R836/3038-3082  OS Drosophila simulans
#=GS A0A0J9R836/3038-3082  DE Uncharacterized protein, isoform B
#=GS A0A0J9R836/3038-3082  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila simulans; 
#=GS B3N8S7/3038-3081      AC B3N8S7
#=GS B3N8S7/3038-3081      OS Drosophila erecta
#=GS B3N8S7/3038-3081      DE Uncharacterized protein
#=GS B3N8S7/3038-3081      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila erecta; 
#=GS B4HRL7/3016-3060      AC B4HRL7
#=GS B4HRL7/3016-3060      OS Drosophila sechellia
#=GS B4HRL7/3016-3060      DE GM21016
#=GS B4HRL7/3016-3060      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila sechellia; 
#=GS A0A0J9R7W4/3038-3082  AC A0A0J9R7W4
#=GS A0A0J9R7W4/3038-3082  OS Drosophila simulans
#=GS A0A0J9R7W4/3038-3082  DE Uncharacterized protein, isoform C
#=GS A0A0J9R7W4/3038-3082  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila simulans; 
#=GS A0A3B0IZP1/2962-3005  AC A0A3B0IZP1
#=GS A0A3B0IZP1/2962-3005  OS Drosophila guanche
#=GS A0A3B0IZP1/2962-3005  DE Blast:Prolow-density lipoprotein receptor-related protein 1
#=GS A0A3B0IZP1/2962-3005  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; obscura group; obscura subgroup; Drosophila guanche; 
#=GS A0A3B0JKF4/2962-3005  AC A0A3B0JKF4
#=GS A0A3B0JKF4/2962-3005  OS Drosophila guanche
#=GS A0A3B0JKF4/2962-3005  DE Blast:Prolow-density lipoprotein receptor-related protein 1
#=GS A0A3B0JKF4/2962-3005  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; obscura group; obscura subgroup; Drosophila guanche; 
#=GS A0A3B0JRG0/2962-3005  AC A0A3B0JRG0
#=GS A0A3B0JRG0/2962-3005  OS Drosophila guanche
#=GS A0A3B0JRG0/2962-3005  DE Blast:Prolow-density lipoprotein receptor-related protein 1
#=GS A0A3B0JRG0/2962-3005  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; obscura group; obscura subgroup; Drosophila guanche; 
#=GS A0A3B0IZV5/2919-2962  AC A0A3B0IZV5
#=GS A0A3B0IZV5/2919-2962  OS Drosophila guanche
#=GS A0A3B0IZV5/2919-2962  DE Blast:Prolow-density lipoprotein receptor-related protein 1
#=GS A0A3B0IZV5/2919-2962  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; obscura group; obscura subgroup; Drosophila guanche; 
#=GS A0A0P8Y9D7/3006-3048  AC A0A0P8Y9D7
#=GS A0A0P8Y9D7/3006-3048  OS Drosophila ananassae
#=GS A0A0P8Y9D7/3006-3048  DE Uncharacterized protein, isoform C
#=GS A0A0P8Y9D7/3006-3048  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; ananassae subgroup; Drosophila ananassae; 
#=GS B3MGF4/3007-3049      AC B3MGF4
#=GS B3MGF4/3007-3049      OS Drosophila ananassae
#=GS B3MGF4/3007-3049      DE Uncharacterized protein, isoform B
#=GS B3MGF4/3007-3049      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; ananassae subgroup; Drosophila ananassae; 
#=GS B5DZ34/2958-3001      AC B5DZ34
#=GS B5DZ34/2958-3001      OS Drosophila pseudoobscura pseudoobscura
#=GS B5DZ34/2958-3001      DE Uncharacterized protein
#=GS B5DZ34/2958-3001      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; obscura group; pseudoobscura subgroup; Drosophila pseudoobscura; Drosophila pseudoobscura pseudoobscura; 
#=GS B4GDB6/2935-2978      AC B4GDB6
#=GS B4GDB6/2935-2978      OS Drosophila persimilis
#=GS B4GDB6/2935-2978      DE GL11210
#=GS B4GDB6/2935-2978      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; obscura group; pseudoobscura subgroup; Drosophila persimilis; 
#=GS A0A1W4VZ20/2987-3031  AC A0A1W4VZ20
#=GS A0A1W4VZ20/2987-3031  OS Drosophila ficusphila
#=GS A0A1W4VZ20/2987-3031  DE low-density lipoprotein receptor-related protein 1 isoform X2
#=GS A0A1W4VZ20/2987-3031  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; ficusphila subgroup; Drosophila ficusphila; 
#=GS C3Y566/107-151        AC C3Y566
#=GS C3Y566/107-151        OS Branchiostoma floridae
#=GS C3Y566/107-151        DE Uncharacterized protein
#=GS C3Y566/107-151        DR ORG; Eukaryota; Metazoa; Chordata; Cephalochordata; Branchiostomidae; Branchiostoma; Branchiostoma floridae; 
#=GS C3Y568/195-238        AC C3Y568
#=GS C3Y568/195-238        OS Branchiostoma floridae
#=GS C3Y568/195-238        DE Uncharacterized protein
#=GS C3Y568/195-238        DR ORG; Eukaryota; Metazoa; Chordata; Cephalochordata; Branchiostomidae; Branchiostoma; Branchiostoma floridae; 
#=GF SQ 20
A0A0B4KFD1/3063-3107          --VNECLI-----PDICEHECEDKVVGYQCHCRPGYKVLPKSPHLCTDIDEC
A1Z7C4/3037-3081              --VNECLI-----PDICEHECEDKVVGYQCHCRPGYKVLPKSPHLCTDIDEC
C3Y569/112-156                --IDECSATIGRARDKCSHGCTDLRDGYSCTCPPGWELSQANNTACV-----
A0A1W4WAT3/3025-3069          --VNECLI-----PDICEHECEDKVVGYQCHCRPGYKVLPKSPHLCTDIDEC
B4P2Q0/3038-3081              --VNECLI-----PDICEHECEDKVVGYQCHCRSGFKLLPKSTHLCTDIDE-
A0A0J9R836/3038-3082          --VNECLI-----PDICEHECEDKVVGYQCHCRPGYKVLPRSPHLCTDIDEC
B3N8S7/3038-3081              --VNECLI-----PDICEHECEDKVIGYQCHCRPGYKVLARSPHLCTDIDE-
B4HRL7/3016-3060              --VNECLI-----PDICEHECEDKVVGYQCHCRPGYKVLPRSPHLCTDIDEC
A0A0J9R7W4/3038-3082          --VNECLI-----PDICEHECEDKVVGYQCHCRPGYKVLPRSPHLCTDIDEC
A0A3B0IZP1/2962-3005          --VNECLI-----PDICEHECVDKVVGYECLCRPGYKLLPKSPHLCTDIDE-
A0A3B0JKF4/2962-3005          --VNECLI-----PDICEHECVDKVVGYECLCRPGYKLLPKSPHLCTDIDE-
A0A3B0JRG0/2962-3005          --VNECLI-----PDICEHECVDKVVGYECLCRPGYKLLPKSPHLCTDIDE-
A0A3B0IZV5/2919-2962          --VNECLI-----PDICEHECVDKVVGYECLCRPGYKLLPKSPHLCTDIDE-
A0A0P8Y9D7/3006-3048          CNVNECLI-----RDICEHECEDKVVGYKCHCRPGYKVLPKSPHLCTD----
B3MGF4/3007-3049              CNVNECLI-----RDICEHECEDKVVGYKCHCRPGYKVLPKSPHLCTD----
B5DZ34/2958-3001              --VNECLI-----PDICEHECVDKVVGYECLCRPGYKLLPKSPHLCTDIDE-
B4GDB6/2935-2978              --VNECLI-----PDICEHECVDKVVGYECLCRPGYKLLPKSPHLCTDIDE-
A0A1W4VZ20/2987-3031          --VNECLI-----PDICEHECEDKVVGYQCHCRPGYKVLPKSPHLCTDIDEC
C3Y566/107-151                --FDECTA----ETDICPHECVDLPVGYDCACPTGFQWDW-TAVSCVDIDEC
C3Y568/195-238                --VNECTE----GTHDCSHGCVDEADGYSCSCPSGLTLGQ-DTVTCIDIDE-
#=GC scorecons                0067995500000475959694945599493956955544355459564440
#=GC scorecons_70             __****________*_*_***_*___**_*_*_**__________*_*____
#=GC scorecons_80             ____**________*_*_*_*_*___**_*_*__*__________*______
#=GC scorecons_90             ____**__________*_*_*_*___**_*_*__*__________*______
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