# STOCKHOLM 1.0
#=GF ID 1.25.40.820/FF/000002
#=GF DE RTR1p CTD phosphatase
#=GF AC 1.25.40.820/FF/000002
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 39.248
#=GS 5c2yB00/1-183     AC P40084
#=GS 5c2yB00/1-183     OS Saccharomyces cerevisiae S288C
#=GS 5c2yB00/1-183     DE RNA polymerase II subunit B1 CTD phosphatase RTR1
#=GS 5c2yB00/1-183     DR CATH; 5c2y; B:-1-166; 
#=GS 5c2yB00/1-183     DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS 5c2yB00/1-183     DR GO; GO:0005634; GO:0005737; GO:0006366; GO:0008420; GO:0070940; 
#=GS 5c2yB00/1-183     DR EC; 3.1.3.16; 
#=GS 5c2yA00/1-183     AC P40084
#=GS 5c2yA00/1-183     OS Saccharomyces cerevisiae S288C
#=GS 5c2yA00/1-183     DE RNA polymerase II subunit B1 CTD phosphatase RTR1
#=GS 5c2yA00/1-183     DR CATH; 5c2y; A:-1-176; 
#=GS 5c2yA00/1-183     DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS 5c2yA00/1-183     DR GO; GO:0005634; GO:0005737; GO:0006366; GO:0008420; GO:0070940; 
#=GS 5c2yA00/1-183     DR EC; 3.1.3.16; 
#=GS P40084/1-178      AC P40084
#=GS P40084/1-178      OS Saccharomyces cerevisiae S288C
#=GS P40084/1-178      DE RNA polymerase II subunit B1 CTD phosphatase RTR1
#=GS P40084/1-178      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS P40084/1-178      DR GO; GO:0005634; GO:0005737; GO:0006366; GO:0008420; GO:0070940; 
#=GS P40084/1-178      DR EC; 3.1.3.16; 
#=GS Q753Z7/1-166      AC Q753Z7
#=GS Q753Z7/1-166      OS Eremothecium gossypii ATCC 10895
#=GS Q753Z7/1-166      DE AFR175Cp
#=GS Q753Z7/1-166      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Eremothecium; Eremothecium gossypii; 
#=GS R9XIA9/1-166      AC R9XIA9
#=GS R9XIA9/1-166      OS Saccharomycetaceae sp. 'Ashbya aceri'
#=GS R9XIA9/1-166      DE AaceriAFR175Cp
#=GS R9XIA9/1-166      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomycetaceae sp. 'Ashbya aceri'; 
#=GS A0A0L8VRN9/1-178  AC A0A0L8VRN9
#=GS A0A0L8VRN9/1-178  OS Saccharomyces sp. 'boulardii'
#=GS A0A0L8VRN9/1-178  DE RTR1p CTD phosphatase
#=GS A0A0L8VRN9/1-178  DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces sp. 'boulardii'; 
#=GS A0A0L8VRN9/1-178  DR EC; 3.1.3.16; 
#=GS J6EJ55/1-178      AC J6EJ55
#=GS J6EJ55/1-178      OS Saccharomyces kudriavzevii IFO 1802
#=GS J6EJ55/1-178      DE RTR1-like protein
#=GS J6EJ55/1-178      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces kudriavzevii; 
#=GS H0GU28/1-178      AC H0GU28
#=GS H0GU28/1-178      OS Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7
#=GS H0GU28/1-178      DE Rtr1p
#=GS H0GU28/1-178      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae x Saccharomyces kudriavzevii; 
#=GS A0A0L8RL62/1-178  AC A0A0L8RL62
#=GS A0A0L8RL62/1-178  OS Saccharomyces eubayanus
#=GS A0A0L8RL62/1-178  DE RTR1-like protein
#=GS A0A0L8RL62/1-178  DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces eubayanus; 
#=GS B5VHR4/1-178      AC B5VHR4
#=GS B5VHR4/1-178      OS Saccharomyces cerevisiae AWRI1631
#=GS B5VHR4/1-178      DE YER139Cp-like protein
#=GS B5VHR4/1-178      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS B5VHR4/1-178      DR EC; 3.1.3.16; 
#=GS N1P3M0/1-178      AC N1P3M0
#=GS N1P3M0/1-178      OS Saccharomyces cerevisiae CEN.PK113-7D
#=GS N1P3M0/1-178      DE Rtr1p
#=GS N1P3M0/1-178      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS N1P3M0/1-178      DR EC; 3.1.3.16; 
#=GS C8Z7F9/1-178      AC C8Z7F9
#=GS C8Z7F9/1-178      OS Saccharomyces cerevisiae EC1118
#=GS C8Z7F9/1-178      DE Rtr1p
#=GS C8Z7F9/1-178      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS C8Z7F9/1-178      DR EC; 3.1.3.16; 
#=GS C7GQ57/1-178      AC C7GQ57
#=GS C7GQ57/1-178      OS Saccharomyces cerevisiae JAY291
#=GS C7GQ57/1-178      DE Rtr1p
#=GS C7GQ57/1-178      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS C7GQ57/1-178      DR EC; 3.1.3.16; 
#=GS A6ZR96/1-178      AC A6ZR96
#=GS A6ZR96/1-178      OS Saccharomyces cerevisiae YJM789
#=GS A6ZR96/1-178      DE Conserved protein
#=GS A6ZR96/1-178      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS A6ZR96/1-178      DR EC; 3.1.3.16; 
#=GS B3LRQ2/1-178      AC B3LRQ2
#=GS B3LRQ2/1-178      OS Saccharomyces cerevisiae RM11-1a
#=GS B3LRQ2/1-178      DE Uncharacterized protein
#=GS B3LRQ2/1-178      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS B3LRQ2/1-178      DR EC; 3.1.3.16; 
#=GS G2WD26/1-178      AC G2WD26
#=GS G2WD26/1-178      OS Saccharomyces cerevisiae Kyokai no. 7
#=GS G2WD26/1-178      DE K7_Yer139cp
#=GS G2WD26/1-178      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GF SQ 16
5c2yB00/1-183             GPGSGMATIEDIKETALIPFQKHRQLSMHEAEVITLEIIGLLCDSECKDEKTLKYLGRFLTPDMYQDLVDERNLNKRCGYPLCGKSPERIRDPFSMNDTTKKFLLENNPYAYLSHYCSKFHFRCSQFYQVQLSDEALFARTGVHLFEDPEQDKHDIDFKVTLFEELLREKASEEDIKSLISGL
5c2yA00/1-183             GPGSGMATIEDIKETALIPFQKHRQLSMHEAEVITLEIIGLLCDSECKDEKTLKYLGRFLTPDMYQDLVDERNLNKRCGYPLCGKSPERIRDPFSMNDTTKKFLLENNPYAYLSHYCSKFHFRCSQFYQVQLSDEALFARTGVHLFEDPEQDKHDIDFKVTLFEELLREKASEEDIKSLISGL
P40084/1-178              -----MATIEDIKETALIPFQKHRQLSMHEAEVITLEIIGLLCDSECKDEKTLKYLGRFLTPDMYQDLVDERNLNKRCGYPLCGKSPERIRDPFSMNDTTKKFLLENNPYAYLSHYCSKFHFRCSQFYQVQLSDEALFARTGVHLFEDPEQDKHDIDFKVTLFEELLREKASEEDIKSLISGL
Q753Z7/1-166              -----MATIEDIQKQVLVAYQQHRQLSLKEADLLTVELLELLSQTECTPE-TLKYVGRFFTKTTYSDLIDERNLNKLCGYPLCGQSQGRIRDPYE-NRRVSNFLTQNNPYKYLTSFCSKLHFRCSQFYQVQLSDEALFARVGVHL-DDYEAG------RVLLLEEAM---AEERDLRTMIRGM
R9XIA9/1-166              -----MATIEDIQRQVLAAYRQHRQLSLKEADLLTVELLELLSQTECTPE-TLKYVGRFFTKTTYSDLIDERNLNKRCGYPLCGQSQGRIRDPYE-NRRVSSFLTQNNPYKYLTSFCSKLHFRCSQFYQVQLSDEALFARVGVHL-DDYEAG------RVVLLEEAM---AEERDLRTMIRGM
A0A0L8VRN9/1-178          -----MATIEDIKETALIPFQKHRQLSMHEAEVITLEIIGLLCDSECKDEKTLKYLGRFLTPDMYQDLVDERNLNKRCGYPLCGKSPERIRDPFSMNDTTKKFLLENNPYAYLSHYCSKFHFRCSQFYQVQLSDEALFARTGVHLFEDPEQDKHDIDFKVTLFEELLREKASEEDIKSLISGL
J6EJ55/1-178              -----MATIEDIKETALIPFQKHRQLSMHEAEVITLEIIGLLCDSECKDEKTLKYLSRFLTPDMYQDLVDERNLNKRCGYPLCGKSPERIRDPFSMSDTTKKFLLENNPYAYLSHFCSKFHFRCSQFYQVQLSDEALFARTGVHLFEDPEQDKHDIDFKITLFEELLREKASEEDIKSLISGL
H0GU28/1-178              -----MATIEDIKETALIPFQKHRQLSMHEAEVITLEIIGLLCDSECKDEKTLKYLSRFLTPDMYQDLVDERNLNKRCGYPLCGKSPERIRDPFSMNDTTKKFLLENNPYAYLSHFCSKFHFRCSQFYQVQLSDEALFARTGVHLFEDPEQDKHDIDFKITLFEELLREKASEEDIKSLISGL
A0A0L8RL62/1-178          -----MATIEDIKEAALIPFQKHRQLSIHEAEVITLEIIGLLCDSECKDEETLKYLSRFLTPDMYQDLVDERNLNKRCGYPLCGTAPERIRDPFSMNDTTKKFLLENNPYAYLSHYCSKFHFRCSQFYQVQLSDEALFARTGIHLFEDPEQDKHDVDFKITLFEELLREKASEDDIKSLISGL
B5VHR4/1-178              -----MATIEDIKETALIPFQKHRQLSMHEAEVITLEIIGLLCDSECKDEKTLKYLGRFLTPDMYQDLVDERNLNKRCGYPLCGKSPERIRDPFSMNDTTKKFLLENNPYAYLSHYCSKFHFRCSQFYQVQLSDEALFARTGVHLFEDPEQDKHDIDFKVTLFEELLREKASEEDIKSLISGL
N1P3M0/1-178              -----MATIEDIKETALIPFQKHRQLSMHEAEVITLEIIGLLCDSECKDEKTLKYLGRFLTPDMYQDLVDERNLNKRCGYPLCGKSPERIRDPFSMNDTTKKFLLENNPYAYLSHYCSKFHFRCSQFYQVQLSDEALFARTGVHLFEDPEQDKHDIDFKVTLFEELLREKASEEDIKSLISGL
C8Z7F9/1-178              -----MATIEDIKETALIPFQKHRQLSMHEAEVITLEIIGLLCDSECKDEKTLKYLGRFLTPDMYQDLVDERNLNKRCGYPLCGKSPERIRDPFSMNDTTKKFLLENNPYAYLSHYCSKFHFRCSQFYQVQLSDEALFARTGVHLFEDPEQDKHDIDFKVTLFEELLREKASEEDIKSLISGL
C7GQ57/1-178              -----MATIEDIKETALIPFQKHRQLSMHEAEVITLEIIGLLCDSECKDEKTLKYLGRFLTPDMYQDLVDERNLNKRCGYPLCGKSPERIRDPFSMNDTTKKFLLENNPYAYLSHYCSKFHFRCSQFYQVQLSDEALFARTGVHLFEDPEQDKHDIDFKVTLFEELLREKASEEDIKSLISGL
A6ZR96/1-178              -----MATIEDIKETALIPFQKHRQLSMHEAEVITLEIIGLLCDSECKDEKTLKYLGRFLTPDMYQDLVDERNLNKRCGYPLCGKSPERIRDPFSMNDTTKKFLLENNPYAYLSHYCSKFHFRCSQFYQVQLSDEALFARTGVHLFEDPEQDKHDIDFKVTLFEELLREKASEEDIKSLISGL
B3LRQ2/1-178              -----MATIEDIKETALIPFQKHRQLSMHEAEVITLEIIGLLCDSECKDEKTLKYLGRFLTPDMYQDLVDERNLNKRCGYPLCGKSPERIRDPFSMNDTTKKFLLENNPYAYLSHYCSKFHFRCSQFYQVQLSDEALFARTGVHLFEDPEQDKHDIDFKVTLFEELLREKASEEDIKSLISGL
G2WD26/1-178              -----MATIEDIKETALIPFQKHRQLSMHEAEVITLEIIGLLCDSECKDEKTLKYLGRFLTPDMYQDLVDERNLNKRCGYPLCGKSPERIRDPFSMNDTTKKFLLENNPYAYLSHYCSKFHFRCSQFYQVQLSDEALFARTGVHLFEDPEQDKHDIDFKVTLFEELLREKASEEDIKSLISGL
#=GC scorecons            000009999999655595577699999659966696966599555995492999967996945595996999999959999999585599999753855555995699995995579996999999999999999999995989936949553332336849699563339595966569596
#=GC scorecons_70         _____********___*__*********_**********_**___**__*_**********___*_**********_*******_*__******__*_____**_*****_**__*************************_****_**_*________**_****_*___*_*_***_**_**
#=GC scorecons_80         _____*******____*__*__*****__**___*_*___**___**__*_****_***_*___*_**_*******_*******_*__******__*_____**__****_**__****_********************_****__*_*_________*_*_**_____*_*_*____*_*_
#=GC scorecons_90         _____*******____*_____*****__**___*_*___**___**__*_****__**_*___*_**_*******_*******_*__*****___*_____**__****_**___***_********************_****__*_*___________*_**_____*_*_*____*_*_
//