# STOCKHOLM 1.0
#=GF ID 1.20.58.830/FF/000023
#=GF DE Erythrocyte membrane protein 1, PfEMP1
#=GF AC 1.20.58.830/FF/000023
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 69.260
#=GS Q8IIZ4/2213-2381                AC Q8IIZ4
#=GS Q8IIZ4/2213-2381                OS Plasmodium falciparum 3D7
#=GS Q8IIZ4/2213-2381                DE Erythrocyte membrane protein 1, PfEMP1
#=GS Q8IIZ4/2213-2381                DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS Q8IIZ4/2213-2381                DR GO; GO:0020002; GO:0020013; GO:0020030; GO:0020033; GO:0020035; GO:0046789; GO:0050839; GO:0098609; 
#=GS Q8IAK3/1001-1190                AC Q8IAK3
#=GS Q8IAK3/1001-1190                OS Plasmodium falciparum 3D7
#=GS Q8IAK3/1001-1190                DE Erythrocyte membrane protein 1, PfEMP1
#=GS Q8IAK3/1001-1190                DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS Q8IAK3/1001-1190                DR GO; GO:0020002; GO:0020013; GO:0020030; GO:0020033; GO:0020035; GO:0050839; GO:0098609; 
#=GS Q8I521/1025-1101_1133-1218      AC Q8I521
#=GS Q8I521/1025-1101_1133-1218      OS Plasmodium falciparum 3D7
#=GS Q8I521/1025-1101_1133-1218      DE Erythrocyte membrane protein 1, PfEMP1
#=GS Q8I521/1025-1101_1133-1218      DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS Q8I521/1025-1101_1133-1218      DR GO; GO:0020002; GO:0020013; GO:0020030; GO:0020033; GO:0020035; GO:0046789; GO:0050839; GO:0098609; 
#=GS Q8I218/1013-1186                AC Q8I218
#=GS Q8I218/1013-1186                OS Plasmodium falciparum 3D7
#=GS Q8I218/1013-1186                DE Erythrocyte membrane protein 1, PfEMP1
#=GS Q8I218/1013-1186                DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS Q8I218/1013-1186                DR GO; GO:0020002; GO:0020013; GO:0020030; GO:0020033; GO:0020035; GO:0050839; GO:0098609; 
#=GS A0A2I0C0Q5/2213-2381            AC A0A2I0C0Q5
#=GS A0A2I0C0Q5/2213-2381            OS Plasmodium falciparum NF54
#=GS A0A2I0C0Q5/2213-2381            DE Erythrocyte membrane protein 1
#=GS A0A2I0C0Q5/2213-2381            DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS W7JU12/2213-2381                AC W7JU12
#=GS W7JU12/2213-2381                OS Plasmodium falciparum NF54
#=GS W7JU12/2213-2381                DE Uncharacterized protein
#=GS W7JU12/2213-2381                DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS A0A2I0BZ82/1025-1101_1133-1218  AC A0A2I0BZ82
#=GS A0A2I0BZ82/1025-1101_1133-1218  OS Plasmodium falciparum NF54
#=GS A0A2I0BZ82/1025-1101_1133-1218  DE Erythrocyte membrane protein 1
#=GS A0A2I0BZ82/1025-1101_1133-1218  DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS W7K1T7/408-484_516-601          AC W7K1T7
#=GS W7K1T7/408-484_516-601          OS Plasmodium falciparum NF54
#=GS W7K1T7/408-484_516-601          DE Uncharacterized protein
#=GS W7K1T7/408-484_516-601          DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS A0A2I0BX13/1001-1190            AC A0A2I0BX13
#=GS A0A2I0BX13/1001-1190            OS Plasmodium falciparum NF54
#=GS A0A2I0BX13/1001-1190            DE Erythrocyte membrane protein 1
#=GS A0A2I0BX13/1001-1190            DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS A0A2I0BZG6/1013-1186            AC A0A2I0BZG6
#=GS A0A2I0BZG6/1013-1186            OS Plasmodium falciparum NF54
#=GS A0A2I0BZG6/1013-1186            DE Erythrocyte membrane protein 1
#=GS A0A2I0BZG6/1013-1186            DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS W7JZW9/1063-1236                AC W7JZW9
#=GS W7JZW9/1063-1236                OS Plasmodium falciparum NF54
#=GS W7JZW9/1063-1236                DE Uncharacterized protein
#=GS W7JZW9/1063-1236                DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GF SQ 11
Q8IIZ4/2213-2381                        IPQRLRWMTEWAEWFCKMQSQEYEVLVKQCRNCR---SGICENGKD-DCVKCTQACNTYKQKIKKWEDQWKEISKKYKTLYQQAKGSVNGATTSSTTDEKDKDVVDFLKMLHQKN----------------------TDNTIYTTAAGFIHQEAHMT-DCQKQTIFCKNTS--------YNDKKKYAFRHPPHDHDDACACRPP
Q8IAK3/1001-1190                        IPQRLRWMTEWAEWYCKAQKKEYDELVKGCKGCMGNGQGCTKDSSDGECKKCTEACNTYKQKIKTWENQWKKIKGKYEKLYEQA---TKNGETSGTPNEKDKDVVDFLKQLLPRNSAAARNRVIRAAGSSAPGVTALTPITLYSSAAGYIHQELGKTVGCNTQKEFCKNGSG-----------EKYAFKHPPKEYKDACSCNTR
Q8I521/1025-1101_1133-1218              IPQRLRWMTEWAEWFCKAQSQEYDKLFMQCAKCMGNGQGCTKDSSDGECEKCKEACTSYANFINTWKPQWVPMQIQYQKEYENA---TRSSSTTKVS-------------------------------------STASPITPYSSPEGYIHQELPIT-GCQKQKEFCYYKNGLTSRSSDAKENKNYAFKNPPHGYDLACTCNTR
Q8I218/1013-1186                        IPQRLRWMTEWAEWYCKEQSRLYGELLEKCQSCKGK-QKCTE--GDVDCGKCKAACDKYKDEINKWREQWTKIKGKYKTLYKKA---TKPGVTTSNNPKDEKDVVDFLKQLLPRKS------------KNTPGVTAMTPNTLYSSAAGYIHQELGKTVGCNTQKEFCDNKKG------------KYAFKHPPKEYEEACICDTR
A0A2I0C0Q5/2213-2381                    IPQRLRWMTEWAEWFCKMQSQEYEVLVKQCRNCR---SGICENGKD-DCVKCTQACNTYKQKIKKWEDQWKEISKKYKTLYQQAKGSVNGATTSSTTDEKDKDVVDFLKMLHQKN----------------------TDNTIYTTAAGFIHQEAHMT-DCQKQTIFCKNTS--------YNDKKKYAFRHPPHDHDDACACRPP
W7JU12/2213-2381                        IPQRLRWMTEWAEWFCKMQSQEYEVLVKQCRNCR---SGICENGKD-DCVKCTQACNTYKQKIKKWEDQWKEISKKYKTLYQQAKGSVNGATTSSTTDEKDKDVVDFLKMLHQKN----------------------TDNTIYTTAAGFIHQEAHMT-DCQKQTIFCKNTS--------YNDKKKYAFRHPPHDHDDACACRPP
A0A2I0BZ82/1025-1101_1133-1218          IPQRLRWMTEWAEWFCKAQSQEYDKLFMQCAKCMGNGQGCTKDSSDGECEKCKEACTSYANFINTWKPQWVPMQIQYQKEYENA---TRSSSTTKVS-------------------------------------STASPITPYSSPEGYIHQELPIT-GCQKQKEFCYYKNGLTSRSSDAKENKNYAFKNPPHGYDLACTCNTR
W7K1T7/408-484_516-601                  IPQRLRWMTEWAEWFCKAQSQEYDKLFMQCAKCMGNGQGCTKDSSDGECEKCKEACTSYANFINTWKPQWVPMQIQYQKEYENA---TRSSSTTKVS-------------------------------------STASPITPYSSPEGYIHQELPIT-GCQKQKEFCYYKNGLTSRSSDAKENKNYAFKNPPHGYDLACTCNTR
A0A2I0BX13/1001-1190                    IPQRLRWMTEWAEWYCKAQKKEYDELVKGCKGCMGNGQGCTKDSSDGECKKCTEACNTYKQKIKTWENQWKKIKGKYEKLYEQA---TKNGETSGTPNEKDKDVVDFLKQLLPRNSAAARNRVIRAAGSSAPGVTALTPITLYSSAAGYIHQELGKTVGCNTQKEFCKNGSG-----------EKYAFKHPPKEYKDACSCNTR
A0A2I0BZG6/1013-1186                    IPQRLRWMTEWAEWYCKEQSRLYGELLEKCQSCKGK-QKCTE--GDVDCGKCKAACDKYKDEINKWREQWTKIKGKYKTLYKKA---TKPGVTTSNNPKDEKDVVDFLKQLLPRKS------------KNTPGVTAMTPNTLYSSAAGYIHQELGKTVGCNTQKEFCDNKKG------------KYAFKHPPKEYEEACICDTR
W7JZW9/1063-1236                        IPQRLRWMTEWAEWYCKEQSRLYGELLEKCQSCKGK-QKCTE--GDVDCGKCKAACDKYKDEINKWREQWTKIKGKYKTLYKKA---TKPGVTTSNNPKDEKDVVDFLKQLLPRKS------------KNTPGVTAMTPNTLYSSAAGYIHQELGKTVGCNTQKEFCDNKKG------------KYAFKHPPKEYEEACICDTR
#=GC scorecons                          999999999999997994966595495459449443166566334927939954995495439659549944743695559559000654539644422234444444424223210000000000000001113326559496665979999644916955965994544400000001121369997699657649949566
#=GC scorecons_70                       *****************_**__*__*___*__*____________*_**_**__**__*___*__*__**__*__**___*__*___*____*____________________________________________*__*_****_******___*_**__*__**_________________********__*__**_*_*_
#=GC scorecons_80                       *****************_*___*__*___*__*____________*__*_**__**__*___*__*__**______*___*__*________*_______________________________________________*_*____******___*__*__*__**__________________****_**__*__**_*___
#=GC scorecons_90                       **************_**_*___*__*___*__*____________*__*_**__**__*___*__*__**______*___*__*________*_______________________________________________*_*____*_****___*__*__*__**__________________***__**_____**_*___
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