# STOCKHOLM 1.0
#=GF ID 1.20.120.20/FF/000010
#=GF DE Apolipoprotein E
#=GF AC 1.20.120.20/FF/000010
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 92.987
#=GS P0DMT6/16-181      AC P0DMT6
#=GS P0DMT6/16-181      OS Alligator mississippiensis
#=GS P0DMT6/16-181      DE Apolipoprotein E
#=GS P0DMT6/16-181      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Crocodylia; Alligatoridae; Alligatorinae; Alligator; Alligator mississippiensis; 
#=GS P0DMT6/16-181      DR GO; GO:0005615; GO:0008201; GO:0031012; GO:0033344; GO:0034361; GO:0034362; GO:0034363; GO:0034364; GO:0034380; GO:0034382; GO:0034447; GO:0042158; GO:0042802; GO:0043395; GO:0050750; GO:0071830; GO:0071831; GO:1900223; GO:1905907; 
#=GS O42364/22-188      AC O42364
#=GS O42364/22-188      OS Danio rerio
#=GS O42364/22-188      DE Apolipoprotein Eb
#=GS O42364/22-188      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Otomorpha; Ostariophysi; Cypriniphysae; Cypriniformes; Cyprinoidei; Cyprinidae; Danio; Danio rerio; 
#=GS O42364/22-188      DR GO; GO:0005615; GO:0008201; GO:0031012; GO:0033344; GO:0034361; GO:0034362; GO:0034363; GO:0034364; GO:0034380; GO:0034382; GO:0034447; GO:0042158; GO:0042802; GO:0043395; GO:0050750; GO:0071830; GO:0071831; 
#=GS H2DFI5/22-183      AC H2DFI5
#=GS H2DFI5/22-183      OS Cyprinus carpio
#=GS H2DFI5/22-183      DE Apolipoprotein E
#=GS H2DFI5/22-183      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Otomorpha; Ostariophysi; Cypriniphysae; Cypriniformes; Cyprinoidei; Cyprinidae; Cyprinus; Cyprinus carpio; 
#=GS H2DFI5/22-183      DR GO; GO:0005623; 
#=GS F7EJB4/17-182      AC F7EJB4
#=GS F7EJB4/17-182      OS Xenopus tropicalis
#=GS F7EJB4/17-182      DE Apolipoprotein E
#=GS F7EJB4/17-182      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana; Xenopus tropicalis; 
#=GS F6X766/22-184      AC F6X766
#=GS F6X766/22-184      OS Ornithorhynchus anatinus
#=GS F6X766/22-184      DE Uncharacterized protein
#=GS F6X766/22-184      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Monotremata; Ornithorhynchidae; Ornithorhynchus; Ornithorhynchus anatinus; 
#=GS W5MA48/2-149       AC W5MA48
#=GS W5MA48/2-149       OS Lepisosteus oculatus
#=GS W5MA48/2-149       DE Uncharacterized protein
#=GS W5MA48/2-149       DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Holostei; Semionotiformes; Lepisosteidae; Lepisosteus; Lepisosteus oculatus; 
#=GS H2MG05/18-188      AC H2MG05
#=GS H2MG05/18-188      OS Oryzias latipes
#=GS H2MG05/18-188      DE Uncharacterized protein
#=GS H2MG05/18-188      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Euteleosteomorpha; Atherinomorphae; Beloniformes; Adrianichthyoidei; Adrianichthyidae; Oryziinae; Oryzias; Oryzias latipes; 
#=GS A0A1U7SXQ0/14-174  AC A0A1U7SXQ0
#=GS A0A1U7SXQ0/14-174  OS Alligator sinensis
#=GS A0A1U7SXQ0/14-174  DE apolipoprotein E isoform X1
#=GS A0A1U7SXQ0/14-174  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Crocodylia; Alligatoridae; Alligatorinae; Alligator; Alligator sinensis; 
#=GS A0A1L8FGY6/20-182  AC A0A1L8FGY6
#=GS A0A1L8FGY6/20-182  OS Xenopus laevis
#=GS A0A1L8FGY6/20-182  DE Uncharacterized protein
#=GS A0A1L8FGY6/20-182  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus; Xenopus laevis; 
#=GS I1XUS7/22-188      AC I1XUS7
#=GS I1XUS7/22-188      OS Cyprinus carpio
#=GS I1XUS7/22-188      DE Apolipoprotein E
#=GS I1XUS7/22-188      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Otomorpha; Ostariophysi; Cypriniphysae; Cypriniformes; Cyprinoidei; Cyprinidae; Cyprinus; Cyprinus carpio; 
#=GS I1XUS7/22-188      DR GO; GO:0005623; 
#=GS A0A3P9MMN9/18-188  AC A0A3P9MMN9
#=GS A0A3P9MMN9/18-188  OS Oryzias latipes
#=GS A0A3P9MMN9/18-188  DE Uncharacterized protein
#=GS A0A3P9MMN9/18-188  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Euteleosteomorpha; Atherinomorphae; Beloniformes; Adrianichthyoidei; Adrianichthyidae; Oryziinae; Oryzias; Oryzias latipes; 
#=GS A0A3P9HB31/18-188  AC A0A3P9HB31
#=GS A0A3P9HB31/18-188  OS Oryzias latipes
#=GS A0A3P9HB31/18-188  DE Apolipoprotein Eb
#=GS A0A3P9HB31/18-188  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Euteleosteomorpha; Atherinomorphae; Beloniformes; Adrianichthyoidei; Adrianichthyidae; Oryziinae; Oryzias; Oryzias latipes; 
#=GS F6V8D1/22-185      AC F6V8D1
#=GS F6V8D1/22-185      OS Xenopus tropicalis
#=GS F6V8D1/22-185      DE Apolipoprotein E
#=GS F6V8D1/22-185      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana; Xenopus tropicalis; 
#=GS A0A1L8FNA0/20-182  AC A0A1L8FNA0
#=GS A0A1L8FNA0/20-182  OS Xenopus laevis
#=GS A0A1L8FNA0/20-182  DE Uncharacterized protein
#=GS A0A1L8FNA0/20-182  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus; Xenopus laevis; 
#=GS Q503V2/22-187      AC Q503V2
#=GS Q503V2/22-187      OS Danio rerio
#=GS Q503V2/22-187      DE Apolipoprotein Ea
#=GS Q503V2/22-187      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Otomorpha; Ostariophysi; Cypriniphysae; Cypriniformes; Cyprinoidei; Cyprinidae; Danio; Danio rerio; 
#=GS F6X749/1-158       AC F6X749
#=GS F6X749/1-158       OS Ornithorhynchus anatinus
#=GS F6X749/1-158       DE Uncharacterized protein
#=GS F6X749/1-158       DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Monotremata; Ornithorhynchidae; Ornithorhynchus; Ornithorhynchus anatinus; 
#=GF SQ 16
P0DMT6/16-181              --------ACQADVQDVETKVKAKWEETVEVFREYVNRLSLATDDITEQITSSQMGKEMDMLIKDXVAELHAYRKDVEERLGPQAVVMRERLHTDVTVLGERLRVDMEEAKTRVQQYLGEARQVAGQNLEDVRSRVGTYLRKLRKRLAKDTEELRRKLEAYSKE----ATQHLETVRE----
O42364/22-188              ---------FQAD------APQPRWEEMVDRFWQYVSELNTQTDGMVQNIKGSQLSRELDTLITDTMAELSSYSENLQTQMTPYASDAAGQLSKDLQLLAGKLQTDMTDAKERSTQYLQELKTMMEQNADDVKNRVGTYTRKLKKRLNKDTEEIRNTVATYMSEMQSRASQNADAVKDRFQP
H2DFI5/22-183              ---------FQAD------APQPRWEEMVDRFWQYVSELNTHADGVVENIKGSQLSRELDTLISDTMAELSTYSDNLQTQLTPYASDAAGQLNKDLQLLASKLQTDMTDAKERSTMYLQELKTMMEQNAEDVKNRVSTYTRKLKKRLNKDTEEIRNTVQTYLGELQSRASQNAEAVK-----
F7EJB4/17-182              ----QAR-SLFRD------APKTKWETALDSFWLTVNKMEEAADEARAKMKDSPISKELDGLIKDTMEELSIYAEDMKSKVSPMAQDAQQRFTEEVSALADKLKSDMEDTKNKAIQYSGDLRMMFDQNIEDVQGKVNMYMKKLKKRLSKDSEDLKKKLSQYGEDFRKSTEDKVENLR-----
F6X766/22-184              ---------LGAG------NTQQPWEETVERFWSYVVQVQNMAYDMHDKAVNSQINKEINSLLEDTATEFNA----LKEQLEPAVEDTRARVHKELTAVVDRLQGDLQEAKERVTQYETEIQAMVGQNVEELRSRTASQLRKLRKRITKDAEELRRRITVYGTGAREGMERGVGVFRERLEP
W5MA48/2-149               SPGCQAR-AVPSE------EPKTKWEEMVDQFWQYVADVNTKMDGVVDNLKSSQLTRELDGLIRDTMAELSVYSDDLQNKLAPYTKDAGERFARDFAVLRDRLHADMLGARNKAAQYSEEMRVMMEQNVDDVRNRLNLYTRKLKKRLGKDTEEIR---------------------------
H2MG05/18-188              -----ARAVRQAE------TSMTRVEDSVDRFWQYIQGLSKDARTIVDTLTTGDMRRELETLITETMTEVTEYKESVLSKLGPITTSTSGQMNEDLKLLINKLQKDMTDAKERSAEYLGELNTMVTMNTDDVRNRITAYTNKLKKRLTKDTEEIREAVATYMGEVHSRASQNADSVRVQVEP
A0A1U7SXQ0/14-174          ------LAACQAE------ETKAKWEETVEVFREYVNRLSLATDDITEQITSSQMGKEMDMLIKDMVAELQAYRKDVEERLGPHAVVMRERLHTDVTVLGERLRVDMEEAKTRVQQYLGEARQVAGQNLEDVRSRVGTYLRKLRKRLAKDTEELRRKLEAYSAE----ATRHLETVR-----
A0A1L8FGY6/20-182          --------SLFRD------APKTKWESALDSFWLTVNKMEAAADETRAQMKDSPITKELDGLIKDTMEELSNYAEDLKSKVSPMAQDAQQRFTEEISALSDNLKSDMEDTKNKAIQYSGDLRMMFDQNIEDVQGKVNIYMKKLKKRISKDSEDLKKKLSQYGDDFRKSTEDKVENVR-----
I1XUS7/22-188              ---------FQAD------APQLRWEEMVERFWQHVSELNTHADGVVQNIKGSQLSRELDTLITDTMTELSSYSDNLQTQLAPYTSDSAGQLNKDLQLLAGKLQTDMNDAKERTTQYLQELKTMMEQNADDVKNRVNTYTRKLKKRLNKDTEEIRNTVSTYLGELQSRASQNAETVKDRFEP
A0A3P9MMN9/18-188          -----ARAVRQAE------TSMTRVEDSVDRFWQYIQGLSKDARTIVDTLTTGDMRRELETLITETMTEVTEYKESVLSKLGPITTSTSGQMNEDLKLLINKLQKDMTDAKERSAEYLGELNTMVTMNTDDVRNRITAYTNKLKKRLTKDTEEIREAVATYMGEVHSRASQNADSVRVQVEP
A0A3P9HB31/18-188          -----ARAVRQAE------TSMTRVEDSVDRFWQYIQGLSKDARTIVDTLTTGDMRRELETLITQTMTEVTEYKESVLSKLGPITTSTSGQMNEDLKLLINKLQKDMTDAKERSAEYLGELNTMVTMNTDDVRNRITAYTNKLKKRLTKDTEEIREAVATYMGEVHSRASQNADSVRVQVEP
F6V8D1/22-185              ------R-SLFRD------APKTKWETALDSFWLTVNKMEEAADEARAKMKDSPISKELDGLIKDTMEELSIYAEDMKSKVSPMAQDAQQRFTEEVSALADKLKSDMEDTKNKAIQYSGDLRMMFDQNIEDVQGKVNMYMKKLKKRLSKDSEDLKKKLSQYGEDFRKSTEDKVENLR-----
A0A1L8FNA0/20-182          --------SLFRD------APKTKWESALDSFWLTVNKMEEAADEARAQMKDSPISKELDGLIKDTMEELSSYAEDMKSKVSPMAQDAQQRFTEEVSALADKLKSDMEDTKNKAIQYSGDLRMMFDQNIEDVQGKVTMYMKKLKKRLSKDSEELKKKLSQYGDDFRKSTEDKVENIR-----
Q503V2/22-187              ----------FQD------EPRSRWEEAVDQFWNHVSELTTRAEEMRDNIKATQLGRELDTLISDSMMELQMYRDDLHSKLAPYAQERAQKFNEDLQLLVTKLRTHMEEAKDRVTEYTEELRTMVEQNSDELKNKANSYAKKLRKRFNKDIQEINKKMSTYLEEVQSRASQSVEDVKDRLEP
F6X749/1-158               --------------------TQQPWEETVERFWSYVVQVQNMAYDMHDKAVNSQINKEINSLLEDTATEFNA----LKEQLEPAVEDTRARVHKELTAVVDRLQGDLQEAKERVTQYETEIQAMVGQNVEELRSRTASQLRKLRKRITKDAEELRRRITVYGTGAREGMERGVGVFRERLEP
#=GC scorecons             00000010123450000003544569547749735734643365443445446554796649747664964363445446649353543465457535744695387467857446944755474469477765754474599799649958766444337335232344434535611112
#=GC scorecons_70          ________________________**__**_**__*______*_________*___****_**_***_**__*_______*_*_______*___*___*__**__**_***_*__**__*___*__**_***__*___*__******_**_****_____*_______________*_____
#=GC scorecons_80          _________________________*___*_**__*_____________________*___**_*___*_____________*_______________*___*__**___*_*___*__*___*___*__**__*___*__*****__**_**_______*_____________________
#=GC scorecons_90          _________________________*_____*_________________________*___*______*_____________*___________________*__*____*_____*__________*_____________**_**__**_*______________________________
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