# STOCKHOLM 1.0
#=GF ID 1.10.8.1190/FF/000006
#=GF DE Polyprotein 1a
#=GF AC 1.10.8.1190/FF/000006
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 5.831
#=GS P0C6Y4/1684-1795      AC P0C6Y4
#=GS P0C6Y4/1684-1795      OS Porcine epidemic diarrhea virus CV777
#=GS P0C6Y4/1684-1795      DE Replicase polyprotein 1ab
#=GS P0C6Y4/1684-1795      DR ORG; Viruses; Nidovirales; Cornidovirineae; Coronaviridae; Orthocoronavirinae; Alphacoronavirus; Pedacovirus; Porcine epidemic diarrhea virus; 
#=GS P0C6Y4/1684-1795      DR EC; 2.7.7.48; 3.4.19.12; 3.6.4.12; 3.6.4.13; 
#=GS P0C6V6/1684-1795      AC P0C6V6
#=GS P0C6V6/1684-1795      OS Porcine epidemic diarrhea virus CV777
#=GS P0C6V6/1684-1795      DE Replicase polyprotein 1a
#=GS P0C6V6/1684-1795      DR ORG; Viruses; Nidovirales; Cornidovirineae; Coronaviridae; Orthocoronavirinae; Alphacoronavirus; Pedacovirus; Porcine epidemic diarrhea virus; 
#=GS P0C6V6/1684-1795      DR EC; 3.4.19.12; 
#=GS R4JK63/1684-1797      AC R4JK63
#=GS R4JK63/1684-1797      OS Porcine epidemic diarrhea virus
#=GS R4JK63/1684-1797      DE Polyprotein
#=GS R4JK63/1684-1797      DR ORG; Viruses; Nidovirales; Cornidovirineae; Coronaviridae; Orthocoronavirinae; Alphacoronavirus; Pedacovirus; Porcine epidemic diarrhea virus; 
#=GS K4L9I6/1684-1797      AC K4L9I6
#=GS K4L9I6/1684-1797      OS Porcine epidemic diarrhea virus
#=GS K4L9I6/1684-1797      DE Polyprotein 1ab
#=GS K4L9I6/1684-1797      DR ORG; Viruses; Nidovirales; Cornidovirineae; Coronaviridae; Orthocoronavirinae; Alphacoronavirus; Pedacovirus; Porcine epidemic diarrhea virus; 
#=GS A0A067YRM0/1676-1787  AC A0A067YRM0
#=GS A0A067YRM0/1676-1787  OS Porcine epidemic diarrhea virus
#=GS A0A067YRM0/1676-1787  DE Polyprotein
#=GS A0A067YRM0/1676-1787  DR ORG; Viruses; Nidovirales; Cornidovirineae; Coronaviridae; Orthocoronavirinae; Alphacoronavirus; Pedacovirus; Porcine epidemic diarrhea virus; 
#=GS A0A1C9C4H2/1676-1787  AC A0A1C9C4H2
#=GS A0A1C9C4H2/1676-1787  OS Porcine epidemic diarrhea virus
#=GS A0A1C9C4H2/1676-1787  DE Polyprotein
#=GS A0A1C9C4H2/1676-1787  DR ORG; Viruses; Nidovirales; Cornidovirineae; Coronaviridae; Orthocoronavirinae; Alphacoronavirus; Pedacovirus; Porcine epidemic diarrhea virus; 
#=GS A0A059VJE6/1684-1795  AC A0A059VJE6
#=GS A0A059VJE6/1684-1795  OS Porcine epidemic diarrhea virus
#=GS A0A059VJE6/1684-1795  DE Polyprotein
#=GS A0A059VJE6/1684-1795  DR ORG; Viruses; Nidovirales; Cornidovirineae; Coronaviridae; Orthocoronavirinae; Alphacoronavirus; Pedacovirus; Porcine epidemic diarrhea virus; 
#=GS U6BPB2/1684-1795      AC U6BPB2
#=GS U6BPB2/1684-1795      OS Porcine epidemic diarrhea virus
#=GS U6BPB2/1684-1795      DE Polyprotein 1a
#=GS U6BPB2/1684-1795      DR ORG; Viruses; Nidovirales; Cornidovirineae; Coronaviridae; Orthocoronavirinae; Alphacoronavirus; Pedacovirus; Porcine epidemic diarrhea virus; 
#=GS A0A0N7EI25/789-900    AC A0A0N7EI25
#=GS A0A0N7EI25/789-900    OS Porcine epidemic diarrhea virus
#=GS A0A0N7EI25/789-900    DE Non-structural protein 3
#=GS A0A0N7EI25/789-900    DR ORG; Viruses; Nidovirales; Cornidovirineae; Coronaviridae; Orthocoronavirinae; Alphacoronavirus; Pedacovirus; Porcine epidemic diarrhea virus; 
#=GF SQ 9
P0C6Y4/1684-1795              VPNANWDSHYGFDKAGEFHMLDHTGFTFPSEVVNGRRVIKTTDNNCWVNVTCLQLQFARFRFKSAGLQAMWESYCTGDVAMFVHWLYWLTGVDKGQPSDSENALNMLSKYIV--
P0C6V6/1684-1795              VPNANWDSHYGFDKAGEFHMLDHTGFTFPSEVVNGRRVIKTTDNNCWVNVTCLQLQFARFRFKSAGLQAMWESYCTGDVAMFVHWLYWLTGVDKGQPSDSENALNMLSKYIV--
R4JK63/1684-1797              VPSANWDSHYGFDKAGEFHMLDHTGFAFPSEVVNGRRVLKTTDNNCWVNVTCLQLQFARFRFKSAGLQAMWESYCTGDVAMFVHWLYWLTGVDKGQPSDSENALNMLSKYIVSA
K4L9I6/1684-1797              VPSANWDSHYGFDKAGEFHMLYHTGFAFPSEVVNGRRVLKTTDNNCWVNVTCLQLQFARFRFKSAGLQAMWESYCTGDVAMFVHWLYWLTGVDKGQPSDSENALNMLSKYIVSA
A0A067YRM0/1676-1787          VPSANWDSHYGFDKAGEFHMLDHTGFAFPSEVVNGRRVLKTTDNNCWVNVTCLQLQFARFRFKSAGLQAMWESYCTGDVAMFVHWLYWLTGVDKGQPSDSENALNMLSKYIV--
A0A1C9C4H2/1676-1787          VPSANWDSHYGFDKAGEFHMLDHTGFAFPSEVVNGRRVLKTTDNNCWVNVTCLQLQFARFRFKSAGLQAMWESYCTGDVAMFVHWLYWLTGVDKGQPSDSENALNMLSKYIV--
A0A059VJE6/1684-1795          VPSANWDSHYGFDKAGEFHMLDHTGFAFPSEVVNGRRVLKTTDNNCWVNVTCLQLQFARFRFKSAGLQAMWESYCTGDVAMFVHWLYWLTGVDKGQPSDSENALNMLSKYIV--
U6BPB2/1684-1795              VPSANWDSHYGFDKAGEFHMLDHTGFAFPSEVVNGRRVLKTTDNNCWVNVTCLQLQFARFRFKSAGLQAMWESYCTGDVAMFVHWLYWLTGVDKGQPSDSENALNMLSKYIV--
A0A0N7EI25/789-900            VPSANWDSHYGFDKAGEFHMLDHTGFAFPSEVVNGRRVLKTTDNNCWVNVTCLQLQFARFRFKSAGLQAMWESYCTGDVAMFVHWLYWLTGVDKGQPSDSENALNMLSKYIV--
#=GC scorecons                996999999999999999999699996999999999996999999999999999999999999999999999999999999999999999999999999999999999999900
#=GC scorecons_70             ****************************************************************************************************************__
#=GC scorecons_80             **_******************_****_***********_*************************************************************************__
#=GC scorecons_90             **_******************_****_***********_*************************************************************************__
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