# STOCKHOLM 1.0
#=GF ID 1.10.565.10/FF/000080
#=GF DE Nuclear Hormone Receptor family
#=GF AC 1.10.565.10/FF/000080
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 12.921
#=GS Q8ITW8/229-464      AC Q8ITW8
#=GS Q8ITW8/229-464      OS Caenorhabditis elegans
#=GS Q8ITW8/229-464      DE Nuclear Hormone Receptor family
#=GS Q8ITW8/229-464      DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis elegans; 
#=GS Q8ITW8/229-464      DR GO; GO:0005634; GO:0007275; GO:0008340; GO:0045923; GO:0045944; 
#=GS O76668/211-446      AC O76668
#=GS O76668/211-446      OS Caenorhabditis elegans
#=GS O76668/211-446      DE Nuclear Hormone Receptor family
#=GS O76668/211-446      DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis elegans; 
#=GS O76668/211-446      DR GO; GO:0005634; GO:0007275; GO:0045923; GO:0045944; 
#=GS A8XMM9/223-460      AC A8XMM9
#=GS A8XMM9/223-460      OS Caenorhabditis briggsae
#=GS A8XMM9/223-460      DE Protein CBR-NHR-80
#=GS A8XMM9/223-460      DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis briggsae; 
#=GS A0A1I7UJZ1/219-457  AC A0A1I7UJZ1
#=GS A0A1I7UJZ1/219-457  OS Caenorhabditis tropicalis
#=GS A0A1I7UJZ1/219-457  DE Uncharacterized protein
#=GS A0A1I7UJZ1/219-457  DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis tropicalis; 
#=GS G0MYQ3/222-458      AC G0MYQ3
#=GS G0MYQ3/222-458      OS Caenorhabditis brenneri
#=GS G0MYQ3/222-458      DE Uncharacterized protein
#=GS G0MYQ3/222-458      DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis brenneri; 
#=GF SQ 5
Q8ITW8/229-464              ---RAVGTLLGQNKHCPYKKEDIKPLVFHDFRLTIKTHIMLVYEWLQTWPELQELDDFDRMSLLRKAVLIHFLLDPSFLSYQIGEPDKLIMQNGGFISTADHHGVGWEDETDISGENKRKYYVPIMKQITDEIMPAMEAMKITFEEFVALKALACFQGGFENVSEAKRHLITQQVNRIMTSLHTHYLENSEEKIAERFGTIVLMLSNIFTAGNDFVQNHREIDIFHIWDLDKLVLQLLN
O76668/211-446              ---RAVGTLLGQNKHCPYKKEDIKPLVFHDFRLTIKTHIMLVYEWLQTWPELQELDDFDRMSLLRKAVLIHFLLDPSFLSYQIGEPDKLIMQNGGFISTADHHGVGWEDETDISGENKRKYYVPIMKQITDEIMPAMEAMKITFEEFVALKALACFQGGFENVSEAKRHLITQQVNRIMTSLHTHYLENSEEKIAERFGTIVLMLSNIFTAGNDFVQNHREIDIFHIWDLDKLVLQLLN
A8XMM9/223-460              -SERAVGTLLGQNRQCPYKKEDIKPLVFHDFRLTIKTHIMLVYEWLQSWPELQELDDFDRMSLLRKAVLIHFLLDPSFLSYQIGEPDKLIMQNGGFISTADHHGVGWEDEPDISGENKRKYYVPIMKQITDEIMPAMKAMSITFEEFVALKALACFQGGFENVSEAKRHLITQQVNRVLSSLHTHYLESSEEKIAERFGTIVLMLSNIFTAGNDFVKNHREIDIFHIWDLDKLVLQLLN
A0A1I7UJZ1/219-457          FSERAVGTLLGQNRQCPYKKEDIKPLNFHDFRQTIKTHIMLVYEWLQTWPELQELDDFDRMSLLRKAVLIHFLLDPSFLSYQIGEPDKLIMQNGGFISTADHHGVGWEDEPDISGENKRKYYVPIMKQITDEIMPPMQALKITFEEFVALKALACFQGGFENVSEPKRPLITQQVNKVMRSLHRHYLENSIERHEERFGTIVLMLSNIFTAGNDFVQNHREIDIFHIWDLDKLVLQLLN
G0MYQ3/222-458              --ERAVGTLLGQNRQCPYKKEDIKPLVFHDFRLTIKTHIMLVYEWLQIWPELQELDDFDRMSLLRKAVLIHFLLDPSFLSYQIGEPDKLIMQNGGFISTADHHGVGWEDEPDISGENKRKYYVPIMKQITDEIMPAMQAMNITFEEFVALKALACFQGGFENVSEAKRHLITQQVNRVMNSLHAHYLENEIEDVAERFGTIVLMLSNIFTAGNDFVQNHREIDIFHIWDLDKLVLQLLN
#=GC scorecons              01399999999997699999999999599999599999999999999599999999999999999999999999999999999999999999999999999999999999699999999999999999999999969596499999999999999999999999969959999999777399949999664954599999999999999999999979999999999999999999999
#=GC scorecons_70           ___***********************_*****_**************_**************************************************************_************************_*_**_************************_**_**********_***_******_*___********************************************
#=GC scorecons_80           ___**********__***********_*****_**************_**************************************************************_************************_*_*__************************_**_*******__*_***_****___*___*********************_**********************
#=GC scorecons_90           ___**********__***********_*****_**************_**************************************************************_************************_*_*__************************_**_*******____***_****___*___*********************_**********************
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