# STOCKHOLM 1.0
#=GF ID 1.10.565.10/FF/000060
#=GF DE Nuclear hormone receptor family member nhr-8
#=GF AC 1.10.565.10/FF/000060
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 19.574
#=GS Q9XYB7/331-559      AC Q9XYB7
#=GS Q9XYB7/331-559      OS Caenorhabditis elegans
#=GS Q9XYB7/331-559      DE Nuclear hormone receptor family member nhr-8
#=GS Q9XYB7/331-559      DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis elegans; 
#=GS Q9XYB7/331-559      DR GO; GO:0004879; GO:0005634; GO:0042632; 
#=GS A0A261BQI5/428-656  AC A0A261BQI5
#=GS A0A261BQI5/428-656  OS Caenorhabditis latens
#=GS A0A261BQI5/428-656  DE Uncharacterized protein
#=GS A0A261BQI5/428-656  DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis latens; 
#=GS E3NUZ0/292-520      AC E3NUZ0
#=GS E3NUZ0/292-520      OS Caenorhabditis remanei
#=GS E3NUZ0/292-520      DE Uncharacterized protein
#=GS E3NUZ0/292-520      DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis remanei; 
#=GS A0A1I7UCL2/334-562  AC A0A1I7UCL2
#=GS A0A1I7UCL2/334-562  OS Caenorhabditis tropicalis
#=GS A0A1I7UCL2/334-562  DE Uncharacterized protein
#=GS A0A1I7UCL2/334-562  DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis tropicalis; 
#=GS A0A2G5U3L4/333-560  AC A0A2G5U3L4
#=GS A0A2G5U3L4/333-560  OS Caenorhabditis nigoni
#=GS A0A2G5U3L4/333-560  DE Uncharacterized protein
#=GS A0A2G5U3L4/333-560  DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis nigoni; 
#=GS A8X198/348-575      AC A8X198
#=GS A8X198/348-575      OS Caenorhabditis briggsae
#=GS A8X198/348-575      DE Protein CBR-NHR-8
#=GS A8X198/348-575      DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis briggsae; 
#=GS E3M7I4/343-571      AC E3M7I4
#=GS E3M7I4/343-571      OS Caenorhabditis remanei
#=GS E3M7I4/343-571      DE CRE-NHR-8 protein
#=GS E3M7I4/343-571      DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis remanei; 
#=GF SQ 7
Q9XYB7/331-559              GVLNEDEITLLEELHVQNEPLNAPLIQWHNPKSIDGVFRIIEEALRRIVNMACQLSLFRELHVDDRKNLLKSGFGELLIVRGLMAYDKSDNSWNHSFGVRGKMEVKVEVLKNPKLEEHYKAHMNLLSTFGEDVRNNEHLMLIFNAAVIFHPHVSNLRDSKRVHSTQAKYFQMLLKLLTFEYGKSRADIAYSNLLNQVVELHRVNRTLLRVFYGLDIAQLDPLIRELCSF
A0A261BQI5/428-656          GVLNPDEMSMLEELHIRNEPLNAPLIQWHNPKSIDGVFKIIEEALRRIVNMACQLNLFRELHVEDRKNLLKSGFGELLIVRGLMAYDKSDNSWNHSFGVGGKMEVKVDVLKNPKLEEHYKAHINLLETFGDDVRNNEHLMLIFNAAVIFHPHVSNLRESNRVHTTQAKYFQILLKLLTFEYGKERADIAYSNLLNQVVELHRVNRTLLRVFYGLDIAQLDPLIRELCSF
E3NUZ0/292-520              GVLNPEEMSMLEELHIRNEPLNAPLIQWHNPKSIDGVFKIIEEALRRIVNMACQLNLFRELHVEDRKNLLKSGFGELLIVRGLMAYDKSDNSWNHSFGVGGKMEVKVDVLKNPKLEEHYKAHINLLETFGDDVRNNEHLMLIFNAAVIFHPHVSNLRESNRVHTTQAKYFQMLLKLLTFEYGKERADIAYSNLLNQVVELHRVNRTLLRVFYGLDIAQLDPLIRELCSF
A0A1I7UCL2/334-562          GVLTEDEMNLLQELHIQNEPLNAPLIQWHNPKSIDGVFKIIEEALRRIVNMACQLSLFRELHVEDRKNLLKSGFGELLIVRGLMAFDKSDNSWNHSFGVGGKMEVKVDLLNNPKLGEHYEAHMNLLSTFGEDVRNNEHLMLIFNATVIFHPNVSNLRESNRVHSTQAKYFQMLLKLLTFEYGKARADIAYSDLLNQVVELHRVNRTLLRVFYGLDIAQLDPLIRELCSF
A0A2G5U3L4/333-560          -ILTREEMTLLEELHIQNEPLNAPLIKWHNPDSIDGVFKIIEEALRRIVNMACQLSLFRELHVDDRKNLLKSGFGELLIVRGLMAYDRSDNSWNHSFGVGGKMEVKVDVLKNPKLEEHYKAHVNLIATFGDDVRNNENLMLCFNAAVIFHPHLTTLRESNRVHATQAKYFQMLLKLLTFEYGKEKADIAYSNLLHQVVELHRVNRTLLRVFYGLDIAQLDPLIRELCSF
A8X198/348-575              -ILTREEMTLLEELHIQNEPLNAPLIKWHNPDSIDGVFKIIEEALRRIVNMACQLSLFRELHVDDRKNLLKSGFGELLIVRGLMAYDRSDNSWNHSFGVGGKMEVKVDVLKNPKLEEHYKAHVNLIATFGDDVRNNENLMLCFNAAVIFHPHLTTLRESNRVHATQAKYFQMLLKLLTFEYGKEKADIAYSNLLHQVVELHRVNRTLLRVFYGLDIAQLDPLIRELCSF
E3M7I4/343-571              GVLNPEEMSMLEELHIRNEPLNAPLIQWHNPKSIDGVFKIIEEALRRIVNMACQLNLFRELHVEDRKNLLKSGFGELLIVRGLMAYDKSDNSWNHSFGVGGKMEVKVDVLKNPKLEEHYKAHINLLETFGDDVRNNEHLMLIFNAAVIFHPHVSNLRESNRVHTTQAKYFQMLLKLLTFEYGKERADIAYSNLLNQVVELHRVNRTLLRVFYGLDIAQLDPLIRELCSF
#=GC scorecons              3795369756979997699999999969999599999979999999999999999699999996999999999999999999999797999999999997999999977979999799979959964999799999969995999799999766699797999499999997999999999995799999979969999999999999999999999999999999999
#=GC scorecons_70           _**__***_**********************_***********************_******************************************************************_***_**********_***_***********__********_*******************_**********_**********************************
#=GC scorecons_80           __*___**__******_*********_****_***********************_*******_***********************_***********_**********_****_***_**_**__***_******_***_*********____********_*******************__*********_**********************************
#=GC scorecons_90           __*___*___*_***__*********_****_******_****************_*******_*********************_*_***********_*******__*_****_***_**_**__***_******_***_***_*****____**_*_***_*******_***********__******_**_**********************************
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