# STOCKHOLM 1.0
#=GF ID 1.10.565.10/FF/000053
#=GF DE Nuclear Hormone Receptor family
#=GF AC 1.10.565.10/FF/000053
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 81.720
#=GS O17898/235-422      AC O17898
#=GS O17898/235-422      OS Caenorhabditis elegans
#=GS O17898/235-422      DE Nuclear hormone receptor family member nhr-60
#=GS O17898/235-422      DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis elegans; 
#=GS O17898/235-422      DR GO; GO:0005635; 
#=GS A0A131MB42/165-367  AC A0A131MB42
#=GS A0A131MB42/165-367  OS Caenorhabditis elegans
#=GS A0A131MB42/165-367  DE Nuclear Hormone Receptor family
#=GS A0A131MB42/165-367  DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis elegans; 
#=GS A0A131MB07/107-310  AC A0A131MB07
#=GS A0A131MB07/107-310  OS Caenorhabditis elegans
#=GS A0A131MB07/107-310  DE Nuclear Hormone Receptor family
#=GS A0A131MB07/107-310  DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis elegans; 
#=GS A5JYV4/233-414      AC A5JYV4
#=GS A5JYV4/233-414      OS Caenorhabditis elegans
#=GS A5JYV4/233-414      DE Nuclear Hormone Receptor family
#=GS A5JYV4/233-414      DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis elegans; 
#=GS F5GUE4/226-398      AC F5GUE4
#=GS F5GUE4/226-398      OS Caenorhabditis elegans
#=GS F5GUE4/226-398      DE Nuclear Hormone Receptor family
#=GS F5GUE4/226-398      DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis elegans; 
#=GS P91983/262-434      AC P91983
#=GS P91983/262-434      OS Caenorhabditis elegans
#=GS P91983/262-434      DE Nuclear Hormone Receptor family
#=GS P91983/262-434      DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis elegans; 
#=GS H2KYV4/247-414      AC H2KYV4
#=GS H2KYV4/247-414      OS Caenorhabditis elegans
#=GS H2KYV4/247-414      DE Nuclear Hormone Receptor family
#=GS H2KYV4/247-414      DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis elegans; 
#=GS G5EE21/252-430      AC G5EE21
#=GS G5EE21/252-430      OS Caenorhabditis elegans
#=GS G5EE21/252-430      DE Nuclear Hormone Receptor family
#=GS G5EE21/252-430      DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis elegans; 
#=GS A8X2Z0/145-335      AC A8X2Z0
#=GS A8X2Z0/145-335      OS Caenorhabditis briggsae
#=GS A8X2Z0/145-335      DE Protein CBG06732
#=GS A8X2Z0/145-335      DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis briggsae; 
#=GS A0A2G5TSH3/322-488  AC A0A2G5TSH3
#=GS A0A2G5TSH3/322-488  OS Caenorhabditis nigoni
#=GS A0A2G5TSH3/322-488  DE Uncharacterized protein
#=GS A0A2G5TSH3/322-488  DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis nigoni; 
#=GS A8Y3C1/288-461      AC A8Y3C1
#=GS A8Y3C1/288-461      OS Caenorhabditis briggsae
#=GS A8Y3C1/288-461      DE Protein CBR-NHR-60
#=GS A8Y3C1/288-461      DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis briggsae; 
#=GF SQ 11
O17898/235-422              LPKPPSPG----KPRDSQHSQNIKQWFFYNLLTTVEYAKTFMFFHRLSSRDKLILTRHVALACTNLHISYSSIRRNLEVIIEPDGSEPMTFNDTHYSASVMSVAPLIRCQIKNIEYLLLKAIVLCNPAVPDLSAKSQEIISLERVKYADALFNYCLRSRSDGPPHFAQLIQIIDVLERQQRMQKDLHLLLVA---------------
A0A131MB42/165-367          -HQLPSSSMRNVSCEEPCPVSNRKYWTHCNMLTTIEYFKTFKFFHELSSRDKFVLARHTLLLCQNLHISHYTVSHNFDSCLQPDGSMQPKQDERHYPIAMMSIEPLVRCKIQHVEYVLLKAICFCNPAVPELSQNAQRILAKERYCFADILINHCLRNYTDGPGHFAELIGIFNLLETQQRMFKDLHIMYVVPLMNKFSRELIK---
A0A131MB07/107-310          EHQLPSSSMRNVSCEEPCPVSNRKYWTHCNMLTTIEYFKTFKFFHELSSRDKFVLARHTLLLCQNLHISHYTVSHNFDSCLQPDGSMQPKQDERHYPIAMMSIEPLVRCKIQHVEYVLLKAICFCNPAVPELSQNAQRILAKERYCFADILINHCLRNYTDGPGHFAELIGIFNLLETQQRMFKDLHIMYVVPLMNKFSRELIK---
A5JYV4/233-414              -------------------------WLYFNMLATIEYAKTFMFFHELLPRDQLILIRYTTLACVNLLVSFSSVSKKYDTAVHPDGTLQMHRNQEYYSSNVMSIIPLIRYQVQQIEYVLLKAICLCNPAVPDLSKHAQLLLAEERQKYSEALLDHCIRNIGNGPSRFTDLIGIIDVLERQQRMQKDLHLLYIAPLVAKTPKDNIVQII
F5GUE4/226-398              --------------------------ILYDLMVSIEYAKTFMFFHQLDSRDRLVLMRYVALALMNLHISYFTVAKKYDTIIHPDGKLAPMKKGMVYAETVMSIAPLIRCEIQETEFVLLKAICLCNPAVPDLSQHAQEILGREREQYADALFDHCLRNRKDGPSQFAELIGMVDLLERQQRMQKDLHLLHVAPFVSKIP--------
P91983/262-434              --------------------------ILYDLMVSIEYAKTFMFFHQLDSRDRLVLMRYVALALMNLHISYFTVAKKYDTIIHPDGKLAPMKKGMVYAETVMSIAPLIRCEIQETEFVLLKAICLCNPAVPDLSQHAQEILGREREQYADALFDHCLRNRKDGPSQFAELIGMVDLLERQQRMQKDLHLLHVAPFVSKIP--------
H2KYV4/247-414              --------------------------LLYDLMVSIEYAKTFMFFHQLGTRDRLILMRYVSLALMNLHISYFTVAKKFDTIIHPDGSLAPMNKGMVYAETVMSMAPLIRCNIQEIEYILLKAICLCNPAVPELSTHAQKILAKEREQYADALFDHCIRSRTNGPAQFAELISMVDILERQQRMQKDLHLLHIAPY-------------
G5EE21/252-430              ----------------PKHNPDRKQWMYFNLFTTVEYAKTFMFFHRLDSRDKFILTKHITLSCMNLHLSYISVARKSEVLTNPDGTSFPSRTQAHYTSKTMSVAPLIRYQIQYIEYTLLKAICLCNPAVPDLSHHAQEILSKEREKYADALFDYCLRTRNDGPSHFAQLMQIFDVLERQQKLQKDLHLLYILPTL------------
A8X2Z0/145-335              ----YSGS----TARPVPSPANQKMWMFFNMMTFIEYAKTFKFFQKLDLNDQLVLIGQNTLLCMNLHNSYYAVSRKMEKCVHPDGTEQPQRDEYHYPVVSMALAPLIRCDIQLIEYILLKAISLCNPTVHGLSEHGQTIIAKERQQFSDVLLDHCLRNRSYGPSRFVELLEIISVLVRQQRLQKDIHIYHISPIISKFP--------
A0A2G5TSH3/322-488          ------------------------NWLFFNLVTTVEYAKTFMFFHKLESKDQFILIKHVTLACMNLHISFSSVQRKFAEPIQPDGSPTPYFDETHYDAMVMSVAPLIRCQVQSVEYLLLKAICLCNPAVPDLSPNAQKTIAIEREKYADALFDHCLRNRS--PAHFAQLMQIFDLLERQQRMQKDIHLLYVAS--------------
A8Y3C1/288-461              --------------------PDRKNWLFFNLVTTVEYAKTFMFFHKLESKDQFILIKHVTLACMNLHISFSSVQRKFAEPIHPDGSPTPYFDETHYDAMVMSVAPLIRCQVQSVEYLLLKAICLCNPAVPDLSPNAQKTIAIEREKYADALFDHCLRNRS--PAHFAQLMQIFDLLERQQRMQKDIHLLYCAIRV-----------I
#=GC scorecons              000001000000000000001212144467655579969995998494569567946644955499769645845645335599953362345359433597659979747835985999996799989769935693665499447786956797965436946976964756697699876996966665522121100000000
#=GC scorecons_70           _____________________________**___***_***_***_*__**_***_**__*___***_**__*__*______***___*______*____**__*****_**__**_****************__**_**__**__***_*_******____*__**_**_*_*_*******_*****___________________
#=GC scorecons_80           ___________________________________**_***_***_*___*___*_____*___***_*___*_________***__________*____**__*****_**__**_*****_*******_**___*_____**__*_*_*__****_____*__*__*__*___**_****_**_*____________________
#=GC scorecons_90           ___________________________________**_***_***_*___*___*_____*___**__*___*_________***__________*____*___**_*______**_*****__***_*__**___*_____**____*_*___*_*_____*__*__*______*__***__**_*____________________
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