# STOCKHOLM 1.0
#=GF ID 1.10.472.30/FF/000008
#=GF DE transcription elongation factor S-II
#=GF AC 1.10.472.30/FF/000008
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 50.664
#=GS P20232/126-242      AC P20232
#=GS P20232/126-242      OS Drosophila melanogaster
#=GS P20232/126-242      DE Transcription elongation factor S-II
#=GS P20232/126-242      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila melanogaster; 
#=GS P20232/126-242      DR GO; GO:0005634; GO:0006368; 
#=GS P23881/170-275      AC P23881
#=GS P23881/170-275      OS Mus musculus
#=GS P23881/170-275      DE Transcription elongation factor A protein 3
#=GS P23881/170-275      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Rodentia; Myomorpha; Muridae; Murinae; Mus; Mus; Mus musculus; 
#=GS P23881/170-275      DR GO; GO:0005634; 
#=GS M9PFV9/126-242      AC M9PFV9
#=GS M9PFV9/126-242      OS Drosophila melanogaster
#=GS M9PFV9/126-242      DE RNA polymerase II elongation factor, isoform B
#=GS M9PFV9/126-242      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila melanogaster; 
#=GS A0A452SRX8/153-262  AC A0A452SRX8
#=GS A0A452SRX8/153-262  OS Ursus americanus
#=GS A0A452SRX8/153-262  DE Transcription elongation factor A3
#=GS A0A452SRX8/153-262  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Laurasiatheria; Carnivora; Caniformia; Ursidae; Ursus; Ursus americanus; 
#=GS A0A1W4W009/129-243  AC A0A1W4W009
#=GS A0A1W4W009/129-243  OS Drosophila ficusphila
#=GS A0A1W4W009/129-243  DE transcription elongation factor S-II
#=GS A0A1W4W009/129-243  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; ficusphila subgroup; Drosophila ficusphila; 
#=GS B4HXM1/125-240      AC B4HXM1
#=GS B4HXM1/125-240      OS Drosophila sechellia
#=GS B4HXM1/125-240      DE GM14545
#=GS B4HXM1/125-240      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila sechellia; 
#=GS B3N5N7/126-242      AC B3N5N7
#=GS B3N5N7/126-242      OS Drosophila erecta
#=GS B3N5N7/126-242      DE Uncharacterized protein
#=GS B3N5N7/126-242      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila erecta; 
#=GS B4NYS9/125-242      AC B4NYS9
#=GS B4NYS9/125-242      OS Drosophila yakuba
#=GS B4NYS9/125-242      DE Uncharacterized protein
#=GS B4NYS9/125-242      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila yakuba; 
#=GS A0A0J9R248/125-240  AC A0A0J9R248
#=GS A0A0J9R248/125-240  OS Drosophila simulans
#=GS A0A0J9R248/125-240  DE Uncharacterized protein
#=GS A0A0J9R248/125-240  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila simulans; 
#=GF SQ 9
P20232/126-242              -SSSKDKEKKGSTSSSQTSFPSGGMTDAVRIKCREMLATALKIGEVPEGCG-EPEEMAAELED------AIYSEFNNTDMKYKNRIRSRVANLKDPKNPGLRGNFMCGAVTAKQLAKMTPEEMAS
P23881/170-275              ------------APAVCLLAPCYLTGDSVRDKCVEMLSAALKAEDNFKDYGVNCDKLASEIED------HIYQELKSTDMKYRNRVRSRISNLKDPRNPGLRRNVLSGAISPELIAKMTAEEMA-
M9PFV9/126-242              -SSSKDKEKKGSTSSSQTSFPSGGMTDAVRIKCREMLATALKIGEVPEGCG-EPEEMAAELED------AIYSEFNNTDMKYKNRIRSRVANLKDPKNPGLRGNFMCGAVTAKQLAKMTPEEMAS
A0A452SRX8/153-262          -------------PSVCLLAPCYLTGDSVRDKCVEMLSAALKAEGE-RDYGVNCDKMASEIEDHILDRSHIYQELKSTDMKYRNRVRSRISNLKDPRNPSLRRNVLSGAISAGLIAKMTAEEMA-
A0A1W4W009/129-243          --SSKDKEKK-SSSSSQSSFPSGGMTDAVRIKCREMLAAALKIGEVPEGCG-EPEEMAAELED------AIYSEFKNTDMKYKNRIRSRVANLKDPKNPGLRGNFMCGAVTAKQLAKMTPEEMAS
B4HXM1/125-240              SSSSKDKEKKG--SSSQTSFPSGGMTDAVRIKCREMLATALKIGEVPEGCG-EPEEMAAELED------AIYSEFNNTDMKYKNRIRSRVANLKDPKNPGLRGNFMCGAVTAKQLARMTPEEMAS
B3N5N7/126-242              -SSSKDKEKKGSSSTSQSSFPSGGMTDAVRIKCREMLAAALKIGEVPEGCG-EPEEMAAELED------AIYSEFKNTDMKYKNRIRSRVANLKDPKNPGLRGNFMCGAVTAKQLAKMTPEEMAS
B4NYS9/125-242              SSSSKDKEKKGSSSSSQSSFPSGGMTDAVRIKCREMLAAALKIGEVPEGCG-EPEEMAAELED------AIYSEFKNTDMKYKNRIRSRVANLKDPKNPGLRGNFMCGAVTAKQLAKMTPEEMAS
A0A0J9R248/125-240          SSSSKDKEKKG--SSSQTSFPSGGMTDAVRIKCREMLATALKIGEVPEGCG-EPEEMAAELED------AIYSEFNNTDMKYKNRIRSRVANLKDPKNPGLRGNFMCGAVTAKQLAKMTPEEMAS
#=GC scorecons              01222222221115654444954455959949949995699955543556915465795969900000049959665999996996999659999969969959565996564469899599992
#=GC scorecons_70           ____________________*_____*_**_**_***_****________*___*_**_*_**_______**_*_*_*************_***********_*_*_***_*___****_****_
#=GC scorecons_80           ____________________*_____*_**_**_***__***________*_____**_*_**_______**_*___*****_**_***__*****_**_**_*___**______****_****_
#=GC scorecons_90           ____________________*_____*_**_**_***__***________*______*_*_**_______**_*___*****_**_***__*****_**_**_*___**______****_****_
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