# STOCKHOLM 1.0
#=GF ID 1.10.30.10/FF/000075
#=GF DE Capicua transcriptional repressor a
#=GF AC 1.10.30.10/FF/000075
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 41.240
#=GS E9HI80/2-53           AC E9HI80
#=GS E9HI80/2-53           OS Daphnia pulex
#=GS E9HI80/2-53           DE Uncharacterized protein
#=GS E9HI80/2-53           DR ORG; Eukaryota; Metazoa; Arthropoda; Crustacea; Branchiopoda; Phyllopoda; Diplostraca; Cladocera; Anomopoda; Daphniidae; Daphnia; Daphnia pulex; 
#=GS W5MB05/52-124         AC W5MB05
#=GS W5MB05/52-124         OS Lepisosteus oculatus
#=GS W5MB05/52-124         DE Capicua transcriptional repressor
#=GS W5MB05/52-124         DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Holostei; Semionotiformes; Lepisosteidae; Lepisosteus; Lepisosteus oculatus; 
#=GS C3Z3Q1/1-74           AC C3Z3Q1
#=GS C3Z3Q1/1-74           OS Branchiostoma floridae
#=GS C3Z3Q1/1-74           DE Uncharacterized protein
#=GS C3Z3Q1/1-74           DR ORG; Eukaryota; Metazoa; Chordata; Cephalochordata; Branchiostomidae; Branchiostoma; Branchiostoma floridae; 
#=GS A0A2D4Q4T1/37-122     AC A0A2D4Q4T1
#=GS A0A2D4Q4T1/37-122     OS Micrurus surinamensis
#=GS A0A2D4Q4T1/37-122     DE Uncharacterized protein
#=GS A0A2D4Q4T1/37-122     DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Lepidosauria; Squamata; Serpentes; Colubroidea; Elapidae; Elapinae; Micrurus; Micrurus surinamensis; 
#=GS H2LS41/1344-1426      AC H2LS41
#=GS H2LS41/1344-1426      OS Oryzias latipes
#=GS H2LS41/1344-1426      DE Uncharacterized protein
#=GS H2LS41/1344-1426      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Euteleosteomorpha; Atherinomorphae; Beloniformes; Adrianichthyoidei; Adrianichthyidae; Oryziinae; Oryzias; Oryzias latipes; 
#=GS F1R060/1290-1372      AC F1R060
#=GS F1R060/1290-1372      OS Danio rerio
#=GS F1R060/1290-1372      DE Capicua transcriptional repressor a
#=GS F1R060/1290-1372      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Otomorpha; Ostariophysi; Cypriniphysae; Cypriniformes; Cyprinoidei; Cyprinidae; Danio; Danio rerio; 
#=GS A0A2D0S4U0/1296-1378  AC A0A2D0S4U0
#=GS A0A2D0S4U0/1296-1378  OS Ictalurus punctatus
#=GS A0A2D0S4U0/1296-1378  DE protein capicua homolog isoform X1
#=GS A0A2D0S4U0/1296-1378  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Otomorpha; Ostariophysi; Characiphysae; Siluriformes; Siluroidei; Ictaluridae; Ictalurus; Ictalurus punctatus; 
#=GS A0A2D0S470/1296-1378  AC A0A2D0S470
#=GS A0A2D0S470/1296-1378  OS Ictalurus punctatus
#=GS A0A2D0S470/1296-1378  DE protein capicua homolog isoform X2
#=GS A0A2D0S470/1296-1378  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Otomorpha; Ostariophysi; Characiphysae; Siluriformes; Siluroidei; Ictaluridae; Ictalurus; Ictalurus punctatus; 
#=GS A0A3P9M5K3/1344-1426  AC A0A3P9M5K3
#=GS A0A3P9M5K3/1344-1426  OS Oryzias latipes
#=GS A0A3P9M5K3/1344-1426  DE Capicua transcriptional repressor a
#=GS A0A3P9M5K3/1344-1426  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Euteleosteomorpha; Atherinomorphae; Beloniformes; Adrianichthyoidei; Adrianichthyidae; Oryziinae; Oryzias; Oryzias latipes; 
#=GS A0A3P9IQN6/1344-1426  AC A0A3P9IQN6
#=GS A0A3P9IQN6/1344-1426  OS Oryzias latipes
#=GS A0A3P9IQN6/1344-1426  DE Capicua transcriptional repressor a
#=GS A0A3P9IQN6/1344-1426  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Euteleosteomorpha; Atherinomorphae; Beloniformes; Adrianichthyoidei; Adrianichthyidae; Oryziinae; Oryzias; Oryzias latipes; 
#=GF SQ 10
E9HI80/2-53                   -----------------------RPMNAFMIFSKRHRALVHQRHPNQDNRTVSKILGEWWYSLGPQEKQKYHDLA---------------
W5MB05/52-124                 ----KDS--DKSSPGKREKDHIRRPMNAFMIFSKRHRALVHQRHPNQDNRTVSKILGEWWYALGHKEKQKYHDLACVLD-----------
C3Z3Q1/1-74                   ----------------KDKDHIRRPMNAFMIFSKRHRALVHQRHPNQDNRTVSKILGEWWYALGPREKQKYHDLAFQVKEAHFKAHPDWK
A0A2D4Q4T1/37-122             SSSEKDGRSPN----KREKDHIRRPMNAFMIFSKRHRALVHQRHPNQDNRTVSKILGEWWYALGPKEKQKYHDLAFQVKEAHFKAHPDWK
H2LS41/1344-1426              -ALPKDG--DK----KREKDHIRRPMNAFMIFSKRHRALVHQRHPNQDNRTVSKILGEWWYALGPNEKQQYHDLAFKVKEAHFKAHPDWK
F1R060/1290-1372              -ALPKDG--DK----KREKDHIRRPMNAFMIFSKRHRALVHQRHPNQDNRTVSKILGEWWYALGPKEKQKYHDLAFQVKEAHFRAHPDWK
A0A2D0S4U0/1296-1378          -ALPKDG--DK----KREKDHIRRPMNAFMIFSKRHRALVHQRHPNQDNRTVSKILGEWWYALGAKEKQKYHDLAFQVKEAHFRAHPDWK
A0A2D0S470/1296-1378          -ALPKDG--DK----KREKDHIRRPMNAFMIFSKRHRALVHQRHPNQDNRTVSKILGEWWYALGAKEKQKYHDLAFQVKEAHFRAHPDWK
A0A3P9M5K3/1344-1426          -ALPKDG--DK----KREKDHIRRPMNAFMIFSKRHRALVHQRHPNQDNRTVSKILGEWWYALGPNEKQQYHDLAFKVKEAHFKAHPDWK
A0A3P9IQN6/1344-1426          -ALPKDG--DK----KREKDHIRRPMNAFMIFSKRHRALVHQRHPNQDNRTVSKILGEWWYALGPNEKQQYHDLAFKVKEAHFKAHPDWK
#=GC scorecons                011133200230000344555559999999999999999999999999999999999999969955999799999324333332333333
#=GC scorecons_70             _______________________*****************************************__*********_______________
#=GC scorecons_80             _______________________**************************************_**__*********_______________
#=GC scorecons_90             _______________________**************************************_**__***_*****_______________
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