# STOCKHOLM 1.0
#=GF ID 1.10.1900.40/FF/000007
#=GF DE Erythrocyte membrane protein 1
#=GF AC 1.10.1900.40/FF/000007
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 76.386
#=GS Q8IFQ6/1839-1902      AC Q8IFQ6
#=GS Q8IFQ6/1839-1902      OS Plasmodium falciparum 3D7
#=GS Q8IFQ6/1839-1902      DE Erythrocyte membrane protein 1, PfEMP1
#=GS Q8IFQ6/1839-1902      DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS Q8IFQ6/1839-1902      DR GO; GO:0020002; GO:0020013; GO:0020030; GO:0020033; GO:0020035; GO:0050839; GO:0098609; 
#=GS Q8IBW9/1889-1947      AC Q8IBW9
#=GS Q8IBW9/1889-1947      OS Plasmodium falciparum 3D7
#=GS Q8IBW9/1889-1947      DE Erythrocyte membrane protein 1, PfEMP1
#=GS Q8IBW9/1889-1947      DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS Q8IBW9/1889-1947      DR GO; GO:0020002; GO:0020013; GO:0020030; GO:0020033; GO:0020035; GO:0050839; GO:0098609; 
#=GS Q9U0G6/1884-1942      AC Q9U0G6
#=GS Q9U0G6/1884-1942      OS Plasmodium falciparum 3D7
#=GS Q9U0G6/1884-1942      DE Erythrocyte membrane protein 1, PfEMP1
#=GS Q9U0G6/1884-1942      DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS Q9U0G6/1884-1942      DR GO; GO:0020002; GO:0020013; GO:0020030; GO:0020033; GO:0020035; GO:0050839; GO:0098609; 
#=GS Q8IBX1/1919-1980      AC Q8IBX1
#=GS Q8IBX1/1919-1980      OS Plasmodium falciparum 3D7
#=GS Q8IBX1/1919-1980      DE Erythrocyte membrane protein 1, PfEMP1
#=GS Q8IBX1/1919-1980      DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS Q8IBX1/1919-1980      DR GO; GO:0020002; GO:0020013; GO:0020030; GO:0020033; GO:0020035; GO:0050839; GO:0098609; 
#=GS A0A2I0BZX2/1839-1902  AC A0A2I0BZX2
#=GS A0A2I0BZX2/1839-1902  OS Plasmodium falciparum NF54
#=GS A0A2I0BZX2/1839-1902  DE Erythrocyte membrane protein 1
#=GS A0A2I0BZX2/1839-1902  DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS A0A0L0CUC0/1928-1989  AC A0A0L0CUC0
#=GS A0A0L0CUC0/1928-1989  OS Plasmodium falciparum RAJ116
#=GS A0A0L0CUC0/1928-1989  DE Variant-specific surface protein
#=GS A0A0L0CUC0/1928-1989  DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS W7FII5/2224-2288      AC W7FII5
#=GS W7FII5/2224-2288      OS Plasmodium falciparum 7G8
#=GS W7FII5/2224-2288      DE Uncharacterized protein
#=GS W7FII5/2224-2288      DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS A0A0L7M126/2472-2533  AC A0A0L7M126
#=GS A0A0L7M126/2472-2533  OS Plasmodium falciparum Dd2
#=GS A0A0L7M126/2472-2533  DE Uncharacterized protein
#=GS A0A0L7M126/2472-2533  DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS A0A0L1I801/2530-2591  AC A0A0L1I801
#=GS A0A0L1I801/2530-2591  OS Plasmodium falciparum IGH-CR14
#=GS A0A0L1I801/2530-2591  DE Variant-specific surface protein 1
#=GS A0A0L1I801/2530-2591  DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS W7KK60/1469-1532      AC W7KK60
#=GS W7KK60/1469-1532      OS Plasmodium falciparum NF54
#=GS W7KK60/1469-1532      DE Uncharacterized protein
#=GS W7KK60/1469-1532      DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS W4INK2/1107-1169      AC W4INK2
#=GS W4INK2/1107-1169      OS Plasmodium falciparum NF135/5.C10
#=GS W4INK2/1107-1169      DE Uncharacterized protein
#=GS W4INK2/1107-1169      DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS A0A024VFU6/987-1049   AC A0A024VFU6
#=GS A0A024VFU6/987-1049   OS Plasmodium falciparum FCH/4
#=GS A0A024VFU6/987-1049   DE Uncharacterized protein
#=GS A0A024VFU6/987-1049   DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS A0A2I0BNU6/1889-1947  AC A0A2I0BNU6
#=GS A0A2I0BNU6/1889-1947  OS Plasmodium falciparum NF54
#=GS A0A2I0BNU6/1889-1947  DE Erythrocyte membrane protein 1
#=GS A0A2I0BNU6/1889-1947  DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS A0A0L7KIQ3/255-312    AC A0A0L7KIQ3
#=GS A0A0L7KIQ3/255-312    OS Plasmodium falciparum HB3
#=GS A0A0L7KIQ3/255-312    DE PfEMP1
#=GS A0A0L7KIQ3/255-312    DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS A0A0L7KMD0/52-110     AC A0A0L7KMD0
#=GS A0A0L7KMD0/52-110     OS Plasmodium falciparum HB3
#=GS A0A0L7KMD0/52-110     DE Uncharacterized protein
#=GS A0A0L7KMD0/52-110     DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS W7FI87/1288-1346      AC W7FI87
#=GS W7FI87/1288-1346      OS Plasmodium falciparum 7G8
#=GS W7FI87/1288-1346      DE Uncharacterized protein
#=GS W7FI87/1288-1346      DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS A0A2I0BZJ7/1884-1942  AC A0A2I0BZJ7
#=GS A0A2I0BZJ7/1884-1942  OS Plasmodium falciparum NF54
#=GS A0A2I0BZJ7/1884-1942  DE Erythrocyte membrane protein 1
#=GS A0A2I0BZJ7/1884-1942  DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS W7KLP0/120-179        AC W7KLP0
#=GS W7KLP0/120-179        OS Plasmodium falciparum NF54
#=GS W7KLP0/120-179        DE Uncharacterized protein
#=GS W7KLP0/120-179        DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS A0A2I0BPG8/1919-1980  AC A0A2I0BPG8
#=GS A0A2I0BPG8/1919-1980  OS Plasmodium falciparum NF54
#=GS A0A2I0BPG8/1919-1980  DE Erythrocyte membrane protein 1
#=GS A0A2I0BPG8/1919-1980  DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS W4ILB1/1912-1973      AC W4ILB1
#=GS W4ILB1/1912-1973      OS Plasmodium falciparum NF135/5.C10
#=GS W4ILB1/1912-1973      DE Uncharacterized protein
#=GS W4ILB1/1912-1973      DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS A0A0L0CRV5/1835-1896  AC A0A0L0CRV5
#=GS A0A0L0CRV5/1835-1896  OS Plasmodium falciparum RAJ116
#=GS A0A0L0CRV5/1835-1896  DE Erythrocyte membrane protein 1
#=GS A0A0L0CRV5/1835-1896  DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS W7K993/3616-3677      AC W7K993
#=GS W7K993/3616-3677      OS Plasmodium falciparum NF54
#=GS W7K993/3616-3677      DE Uncharacterized protein
#=GS W7K993/3616-3677      DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GF SQ 22
Q8IFQ6/1839-1902              TDNEWNQLKQDFISNILQSTQMDLPNENIIDDFMDKGIQPNNPVLDVNMAEKPFITSIHDRDL-H
Q8IBW9/1889-1947              TDEEWNKLKQDFIS-ILQNPQNDLPQNNISGN-IQMDTHPSVSILHDDMEEKPFITSIHDR----
Q9U0G6/1884-1942              TDEEWNTLKDEFISNMLQSTQNTEP--NILHDNMHYNTHPNTLY-FDKHEEKPFIMLIQDRN---
Q8IBX1/1919-1980              TDEEWNTLKDDFISNMLQNEQEDIPQPDVSKE-LPLNTHPTPS--HDTLDQKPFIMSIHDRNLLN
A0A2I0BZX2/1839-1902          TDNEWNQLKQDFISNILQSTQMDLPNENIIDDFMDKGIQPNNPVLDVNMAEKPFITSIHDRDL-H
A0A0L0CUC0/1928-1989          TDNEWNQLKQDFISNILQSTQMDLPNENIIDDFMDKGIQPNNLILDVNMPEKPFITSIHDRD---
W7FII5/2224-2288              TDNEWNQLKQDFISNILQSTQMDLPNENIIDDFMDKGIQPNNPVLDVNMPEKPFITSIHDRDLDN
A0A0L7M126/2472-2533          TDNEWNQLKQDFISNILQSTQMDLPNENIIDDFMDKGIQPNNLILDVNMPEKPFITSIHDRD---
A0A0L1I801/2530-2591          TDNEWNQLKQDFISNILQSTQMDLPNENIIDDFMDKGIQPNNLILDVNMPEKPFITSIHDRD---
W7KK60/1469-1532              TDNEWNQLKQDFISNILQSTQMDLPNENIIDDFMDKGIQPNNPVLDVNMAEKPFITSIHDRDL-H
W4INK2/1107-1169              TDNEWNQLKQDFISNILQSTQMDLPNENIIDDFMDKGIQPNNLILDVNMPEKPFITSIHDRDL--
A0A024VFU6/987-1049           TDNEWNQLKQDFISNILQSTQMDLPNENIIDDFMDKGIQPNNLILDVNMPEKPFITSIHDRDL--
A0A2I0BNU6/1889-1947          TDEEWNKLKQDFIS-ILQNPQNDLPQNNISGN-IQMDTHPSVSILHDDMEEKPFITSIHDR----
A0A0L7KIQ3/255-312            TDEEWNQLKQDFIS-ILQNPQNDLPQNNISGN-IQMDTHPSVSILHDDMEEKPFITSIHD-----
A0A0L7KMD0/52-110             TDEEWNQLKQDFIS-ILQNPQNDLPQNNISGN-IQMDTHPSVSILHDDMEEKPFITSIHDR----
W7FI87/1288-1346              TDEEWNKLKQDFIS-ILQNPQNDLPQNNISGN-IQMDTHPSVSILHDDMEEKPFITSIHDR----
A0A2I0BZJ7/1884-1942          TDEEWNTLKDEFISNMLQSTQNTEP--NILHDNMHYNTHPNTLY-FDKHEEKPFIMLIQDRN---
W7KLP0/120-179                TDEEWNTLKDEFISNMLQSTQNTEP--NILHDNMHYNTHPNTLY-FDKHEEKPFIMLIQDRNL--
A0A2I0BPG8/1919-1980          TDEEWNTLKDDFISNMLQNEQEDIPQPDVSKE-LPLNTHPTPS--HDTLDQKPFIMSIHDRNLLN
W4ILB1/1912-1973              TDEEWNTLKDDFISNMLQNEQEDILQPDVSKE-LPLNTHPTPS--HDTLDQKPFIMSIHDRNLLN
A0A0L0CRV5/1835-1896          TDEEWNTLKDDFISNMLQNEQEDIPQPDVSKE-LPLNTHPTPS--HDTLDQKPFIMSIHDRNLLN
W7K993/3616-3677              TDEEWNTLKDDFISNMLQNEQEDIPQPDVSKE-LPLNTHPTPS--HDTLDQKPFIMSIHDRNLLN
#=GC scorecons                99699959957999569964947584377446164356695442245454799995697983201
#=GC scorecons_70             ******_**_****_***__*_*_*__**________***__________*****_*****____
#=GC scorecons_80             **_***_**_****__**__*___*___*__________*___________****__****____
#=GC scorecons_90             **_***_**__***__**__*___*______________*___________****__*_**____
//