# STOCKHOLM 1.0
#=GF ID 1.10.10.60/FF/000450
#=GF DE Homeobox protein notochord
#=GF AC 1.10.10.60/FF/000450
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 60.825
#=GS B8A5N9/134-188      AC B8A5N9
#=GS B8A5N9/134-188      OS Danio rerio
#=GS B8A5N9/134-188      DE Notochord homeobox
#=GS B8A5N9/134-188      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Otomorpha; Ostariophysi; Cypriniphysae; Cypriniformes; Cyprinoidei; Cyprinidae; Danio; Danio rerio; 
#=GS B8A5N9/134-188      DR GO; GO:0001947; GO:0003140; GO:0003143; GO:0003160; GO:0007368; GO:0014028; GO:0021508; GO:0021982; GO:0030325; GO:0030903; GO:0032835; GO:0033504; GO:0035050; GO:0035775; GO:0048066; GO:0048319; GO:0048327; GO:0048331; GO:0060034; GO:0061053; GO:0061371; GO:2000223; 
#=GS Q06615/134-210      AC Q06615
#=GS Q06615/134-210      OS Xenopus laevis
#=GS Q06615/134-210      DE Homeobox protein notochord
#=GS Q06615/134-210      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus; Xenopus laevis; 
#=GS Q06615/134-210      DR GO; GO:0005634; GO:0014028; GO:0045892; 
#=GS Q91770/132-207      AC Q91770
#=GS Q91770/132-207      OS Xenopus laevis
#=GS Q91770/132-207      DE Homeobox protein not2
#=GS Q91770/132-207      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus; Xenopus laevis; 
#=GS Q91770/132-207      DR GO; GO:0014028; GO:0045892; 
#=GS B3SAY6/136-214      AC B3SAY6
#=GS B3SAY6/136-214      OS Trichoplax adhaerens
#=GS B3SAY6/136-214      DE Not homeobox transcription factor
#=GS B3SAY6/136-214      DR ORG; Eukaryota; Metazoa; Placozoa; Trichoplacidae; Trichoplax; Trichoplax adhaerens; 
#=GS T1ELB4/1-57         AC T1ELB4
#=GS T1ELB4/1-57         OS Helobdella robusta
#=GS T1ELB4/1-57         DE Uncharacterized protein
#=GS T1ELB4/1-57         DR ORG; Eukaryota; Metazoa; Annelida; Clitellata; Hirudinea; Hirudinida; Glossiphoniiformes; Glossiphoniidae; Helobdella; Helobdella robusta; 
#=GS E9H422/1-60         AC E9H422
#=GS E9H422/1-60         OS Daphnia pulex
#=GS E9H422/1-60         DE Uncharacterized protein
#=GS E9H422/1-60         DR ORG; Eukaryota; Metazoa; Arthropoda; Crustacea; Branchiopoda; Phyllopoda; Diplostraca; Cladocera; Anomopoda; Daphniidae; Daphnia; Daphnia pulex; 
#=GS A0A369SGG5/136-214  AC A0A369SGG5
#=GS A0A369SGG5/136-214  OS Trichoplax sp. H2
#=GS A0A369SGG5/136-214  DE Homeobox protein not2
#=GS A0A369SGG5/136-214  DR ORG; Eukaryota; Metazoa; Placozoa; Trichoplacidae; Trichoplax; Trichoplax sp. H2; 
#=GS F1NJ95/84-149       AC F1NJ95
#=GS F1NJ95/84-149       OS Gallus gallus
#=GS F1NJ95/84-149       DE Uncharacterized protein
#=GS F1NJ95/84-149       DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus; Gallus gallus; 
#=GS K7FAF1/110-175      AC K7FAF1
#=GS K7FAF1/110-175      OS Pelodiscus sinensis
#=GS K7FAF1/110-175      DE Uncharacterized protein
#=GS K7FAF1/110-175      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Testudines; Cryptodira; Trionychia; Trionychidae; Pelodiscus; Pelodiscus sinensis; 
#=GS H9GQ57/4-81         AC H9GQ57
#=GS H9GQ57/4-81         OS Anolis carolinensis
#=GS H9GQ57/4-81         DE Uncharacterized protein
#=GS H9GQ57/4-81         DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Lepidosauria; Squamata; Iguania; Dactyloidae; Anolis; Anolis carolinensis; 
#=GS G1NKR2/29-103       AC G1NKR2
#=GS G1NKR2/29-103       OS Meleagris gallopavo
#=GS G1NKR2/29-103       DE Uncharacterized protein
#=GS G1NKR2/29-103       DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Meleagridinae; Meleagris; Meleagris gallopavo; 
#=GS F7DWZ0/134-210      AC F7DWZ0
#=GS F7DWZ0/134-210      OS Xenopus tropicalis
#=GS F7DWZ0/134-210      DE Notochord homeobox
#=GS F7DWZ0/134-210      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana; Xenopus tropicalis; 
#=GS Q90461/134-188      AC Q90461
#=GS Q90461/134-188      OS Danio rerio
#=GS Q90461/134-188      DE Floating head
#=GS Q90461/134-188      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Otomorpha; Ostariophysi; Cypriniphysae; Cypriniformes; Cyprinoidei; Cyprinidae; Danio; Danio rerio; 
#=GS Q90461/134-188      DR GO; GO:0001947; GO:0003140; GO:0003143; GO:0003160; GO:0007368; GO:0014028; GO:0021508; GO:0021982; GO:0030325; GO:0030903; GO:0032835; GO:0033504; GO:0035050; GO:0035775; GO:0048066; GO:0048319; GO:0048327; GO:0048331; GO:0060034; GO:0061053; GO:0061371; GO:2000223; 
#=GS B7ZPL0/134-210      AC B7ZPL0
#=GS B7ZPL0/134-210      OS Xenopus laevis
#=GS B7ZPL0/134-210      DE Xnot protein
#=GS B7ZPL0/134-210      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus; Xenopus laevis; 
#=GS A0A1L8HSR3/132-207  AC A0A1L8HSR3
#=GS A0A1L8HSR3/132-207  OS Xenopus laevis
#=GS A0A1L8HSR3/132-207  DE Uncharacterized protein
#=GS A0A1L8HSR3/132-207  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus; Xenopus laevis; 
#=GS A0A1L8HKC2/134-210  AC A0A1L8HKC2
#=GS A0A1L8HKC2/134-210  OS Xenopus laevis
#=GS A0A1L8HKC2/134-210  DE Uncharacterized protein
#=GS A0A1L8HKC2/134-210  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus; Xenopus laevis; 
#=GS Q91967/73-147       AC Q91967
#=GS Q91967/73-147       OS Gallus gallus
#=GS Q91967/73-147       DE Gnot1 homeodomain protein
#=GS Q91967/73-147       DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus; Gallus gallus; 
#=GF SQ 17
B8A5N9/134-188              ----------------SKRMRTSFTNDQLSRLEKEFARQQYMVGSERFLLASALQLTEAQVKVWFQNRRIK------------------
Q06615/134-210              ------------GPCKMKRIRTVFTPEQLEKLEKEFLKQQYMVGTERVDLASTLNLTETQVKVWFQNRRIKWRKQSLEQKKAKLSQFGV
Q91770/132-207              -------------PCKLKRIRTVFTPEQLERLEKEFLKQQYMVGTERVDLASTLNLTETQVKVWFQNRRIKWRKQSLEQKKAKLSQFGV
B3SAY6/136-214              KLRSSASNQQHWKSGKNKRVRTIFTPDQLTKLEKEFDQQQYMVGAQRLYLANTLKLSEAQVKVWFQNRRIKWRKDQIKR----------
T1ELB4/1-57                 -----------------KRIRTIFTTEQLQSLEKQFEQQQYMVGSERLFLASSLHLTEAQVKVWFQNRRIKWRK---------------
E9H422/1-60                 -----------------KRVRTIFSAEQLERLEAEFARQQYMVGPERLVLAASLRLSESQVKVWFQNRRIKWRKQHL------------
A0A369SGG5/136-214          KLRSSASNQQHWKSGKNKRVRTIFTPDQLTKLEKEFDQQQYMVGAQRLYLANTLKLSEAQVKVWFQNRRIKWRKDQIKR----------
F1NJ95/84-149               -----------TKAGKAKRVRTIFTSDQLARLEKEFARQQYMVGTERCLLASALHLTEEQVKVWFQNRRIKWRKQSL------------
K7FAF1/110-175              -----------AKAGKAKRVRTIFTSDQLARLEKEFALQQYMVGTERCLLASALHLTEEQVKVWFQNRRIKWRKQSL------------
H9GQ57/4-81                 -----------GGPCKMKRVRTVFTPEQLERLEKEFLKQQYMVGTERVDLAANLHLTETQVKVWFQNRRIKWRKQSLEQKEAKRAPRGT
G1NKR2/29-103               -------------PCKMKRVRTVFKPEQLERLEQEFLKQQYMVGTERVDLAATLRLTETQVKVWFQNRRIKWRKQSMEQKKAKLSQFG-
F7DWZ0/134-210              ------------GPCKMKRIRTVFTPEQLERLEKEFLKQQYMVGTERVDLASTLNLTETQVKVWFQNRRIKWRKQSLEQKKAKLSQFGV
Q90461/134-188              ----------------SKRMRTSFTNDQLSRLEKEFARQQYMVGSERFLLASALQLTEAQVKVWFQNRRIK------------------
B7ZPL0/134-210              ------------GPCKMKRIRTVFTPEQLEKLEKEFLKQQYMVGTERVDLASTLNLTETQVKVWFQNRRIKWRKQSLEQKKAKLSQFGV
A0A1L8HSR3/132-207          -------------PCKLKRIRTVFTPEQLERLEKEFLKQQYMVGTERVDLASTLNLTETQVKVWFQNRRIKWRKQSLEQKKAKLSQFGV
A0A1L8HKC2/134-210          ------------GPCKMKRIRTVFTPEQLEKLEKEFLKQQYMVGTERVDLASTLNLTETQVKVWFQNRRIKWRKQSLEQKKAKLSQFGV
Q91967/73-147               -------------PCKMKRVRTVFKPEQLERLEQEFLKQQYMVGTERVDLAATLRLTETQVKVWFQNRRIKWRKQSMEQKKAKLSQFG-
#=GC scorecons              00000000000012242996995975799469978935999999579439955949695999999999999666433221111111110
#=GC scorecons_70           _________________*****_**_***_******__******_**__**__*_***_***************_______________
#=GC scorecons_80           _________________**_**_*___**__*****__******_**__**__*_*_*_************__________________
#=GC scorecons_90           _________________**_**_*___**__**_**__******__*__**__*_*_*_************__________________
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