# STOCKHOLM 1.0
#=GF ID 1.10.10.250/FF/000008
#=GF DE 39S ribosomal protein L11, mitochondrial
#=GF AC 1.10.10.250/FF/000008
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 75.167
#=GS Q9VFJ2/97-160      AC Q9VFJ2
#=GS Q9VFJ2/97-160      OS Drosophila melanogaster
#=GS Q9VFJ2/97-160      DE 39S ribosomal protein L11, mitochondrial
#=GS Q9VFJ2/97-160      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila melanogaster; 
#=GS Q9VFJ2/97-160      DR GO; GO:0003735; GO:0005762; GO:0006412; GO:0032543; 
#=GS D6WSF4/96-159      AC D6WSF4
#=GS D6WSF4/96-159      OS Tribolium castaneum
#=GS D6WSF4/96-159      DE 39S ribosomal protein L11, mitochondrial-like Protein
#=GS D6WSF4/96-159      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Coleoptera; Polyphaga; Cucujiformia; Tenebrionoidea; Tenebrionidae; Tribolium; Tribolium castaneum; 
#=GS Q7QBV9/97-161      AC Q7QBV9
#=GS Q7QBV9/97-161      OS Anopheles gambiae
#=GS Q7QBV9/97-161      DE 39S ribosomal protein L11, mitochondrial
#=GS Q7QBV9/97-161      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Nematocera; Culicomorpha; Culicoidea; Culicidae; Anophelinae; Anopheles; Cellia; Anopheles gambiae; 
#=GS E9G7U8/76-149      AC E9G7U8
#=GS E9G7U8/76-149      OS Daphnia pulex
#=GS E9G7U8/76-149      DE Uncharacterized protein
#=GS E9G7U8/76-149      DR ORG; Eukaryota; Metazoa; Arthropoda; Crustacea; Branchiopoda; Phyllopoda; Diplostraca; Cladocera; Anomopoda; Daphniidae; Daphnia; Daphnia pulex; 
#=GS T1G6I6/86-157      AC T1G6I6
#=GS T1G6I6/86-157      OS Helobdella robusta
#=GS T1G6I6/86-157      DE Uncharacterized protein
#=GS T1G6I6/86-157      DR ORG; Eukaryota; Metazoa; Annelida; Clitellata; Hirudinea; Hirudinida; Glossiphoniiformes; Glossiphoniidae; Helobdella; Helobdella robusta; 
#=GS Q17AX3/97-162      AC Q17AX3
#=GS Q17AX3/97-162      OS Aedes aegypti
#=GS Q17AX3/97-162      DE 39S ribosomal protein L11, mitochondrial
#=GS Q17AX3/97-162      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Nematocera; Culicomorpha; Culicoidea; Culicidae; Culicinae; Aedini; Aedes; Stegomyia; Aedes aegypti; 
#=GS B0X294/97-161      AC B0X294
#=GS B0X294/97-161      OS Culex quinquefasciatus
#=GS B0X294/97-161      DE 39S ribosomal protein L11, mitochondrial
#=GS B0X294/97-161      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Nematocera; Culicomorpha; Culicoidea; Culicidae; Culicinae; Culicini; Culex; Culex; Culex quinquefasciatus; 
#=GS W5JUE0/97-161      AC W5JUE0
#=GS W5JUE0/97-161      OS Anopheles darlingi
#=GS W5JUE0/97-161      DE 39S ribosomal protein L11, mitochondrial
#=GS W5JUE0/97-161      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Nematocera; Culicomorpha; Culicoidea; Culicidae; Anophelinae; Anopheles; Nyssorhynchus; darlingi group; Anopheles darlingi; 
#=GS A0A084WA24/97-161  AC A0A084WA24
#=GS A0A084WA24/97-161  OS Anopheles sinensis
#=GS A0A084WA24/97-161  DE Uncharacterized protein
#=GS A0A084WA24/97-161  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Nematocera; Culicomorpha; Culicoidea; Culicidae; Anophelinae; Anopheles; Anopheles; Laticorn; Myzorhynchus; hyrcanus group; Anopheles sinensis; 
#=GS A0A182XVH9/97-161  AC A0A182XVH9
#=GS A0A182XVH9/97-161  OS Anopheles stephensi
#=GS A0A182XVH9/97-161  DE Uncharacterized protein
#=GS A0A182XVH9/97-161  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Nematocera; Culicomorpha; Culicoidea; Culicidae; Anophelinae; Anopheles; Cellia; Anopheles stephensi; 
#=GS A0A182UPS0/97-161  AC A0A182UPS0
#=GS A0A182UPS0/97-161  OS Anopheles merus
#=GS A0A182UPS0/97-161  DE 39S ribosomal protein L11, mitochondrial
#=GS A0A182UPS0/97-161  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Nematocera; Culicomorpha; Culicoidea; Culicidae; Anophelinae; Anopheles; Cellia; Anopheles merus; 
#=GS A0A182XEJ2/97-161  AC A0A182XEJ2
#=GS A0A182XEJ2/97-161  OS Anopheles quadriannulatus
#=GS A0A182XEJ2/97-161  DE 39S ribosomal protein L11, mitochondrial
#=GS A0A182XEJ2/97-161  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Nematocera; Culicomorpha; Culicoidea; Culicidae; Anophelinae; Anopheles; Cellia; Anopheles quadriannulatus; 
#=GS A0A182HTD8/97-161  AC A0A182HTD8
#=GS A0A182HTD8/97-161  OS Anopheles arabiensis
#=GS A0A182HTD8/97-161  DE 39S ribosomal protein L11, mitochondrial
#=GS A0A182HTD8/97-161  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Nematocera; Culicomorpha; Culicoidea; Culicidae; Anophelinae; Anopheles; Cellia; Anopheles arabiensis; 
#=GS A0A182LFJ1/97-161  AC A0A182LFJ1
#=GS A0A182LFJ1/97-161  OS Anopheles coluzzii
#=GS A0A182LFJ1/97-161  DE 39S ribosomal protein L11, mitochondrial
#=GS A0A182LFJ1/97-161  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Nematocera; Culicomorpha; Culicoidea; Culicidae; Anophelinae; Anopheles; Cellia; Anopheles coluzzii; 
#=GS A0A182TQS5/97-161  AC A0A182TQS5
#=GS A0A182TQS5/97-161  OS Anopheles melas
#=GS A0A182TQS5/97-161  DE 39S ribosomal protein L11, mitochondrial
#=GS A0A182TQS5/97-161  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Nematocera; Culicomorpha; Culicoidea; Culicidae; Anophelinae; Anopheles; Cellia; Anopheles melas; 
#=GS A0A0M4EGU4/97-160  AC A0A0M4EGU4
#=GS A0A0M4EGU4/97-160  OS Drosophila busckii
#=GS A0A0M4EGU4/97-160  DE MRpL11
#=GS A0A0M4EGU4/97-160  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Dorsilopha; Drosophila busckii; 
#=GS B4LYJ4/97-160      AC B4LYJ4
#=GS B4LYJ4/97-160      OS Drosophila virilis
#=GS B4LYJ4/97-160      DE Uncharacterized protein
#=GS B4LYJ4/97-160      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Drosophila; virilis group; Drosophila virilis; 
#=GS B4JTM0/97-160      AC B4JTM0
#=GS B4JTM0/97-160      OS Drosophila grimshawi
#=GS B4JTM0/97-160      DE GH13965
#=GS B4JTM0/97-160      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; grimshawi group; grimshawi subgroup; Drosophila grimshawi; 
#=GS B4N936/97-161      AC B4N936
#=GS B4N936/97-161      OS Drosophila willistoni
#=GS B4N936/97-161      DE Uncharacterized protein
#=GS B4N936/97-161      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; willistoni group; willistoni subgroup; Drosophila willistoni; 
#=GS B4QZU5/97-160      AC B4QZU5
#=GS B4QZU5/97-160      OS Drosophila simulans
#=GS B4QZU5/97-160      DE GD18962
#=GS B4QZU5/97-160      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila simulans; 
#=GS B4G5Z0/97-160      AC B4G5Z0
#=GS B4G5Z0/97-160      OS Drosophila persimilis
#=GS B4G5Z0/97-160      DE GL23859
#=GS B4G5Z0/97-160      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; obscura group; pseudoobscura subgroup; Drosophila persimilis; 
#=GS Q29AH6/97-160      AC Q29AH6
#=GS Q29AH6/97-160      OS Drosophila pseudoobscura pseudoobscura
#=GS Q29AH6/97-160      DE Uncharacterized protein
#=GS Q29AH6/97-160      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; obscura group; pseudoobscura subgroup; Drosophila pseudoobscura; Drosophila pseudoobscura pseudoobscura; 
#=GS A0A3B0JKL8/97-160  AC A0A3B0JKL8
#=GS A0A3B0JKL8/97-160  OS Drosophila guanche
#=GS A0A3B0JKL8/97-160  DE Blast:39S ribosomal protein L11, mitochondrial
#=GS A0A3B0JKL8/97-160  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; obscura group; obscura subgroup; Drosophila guanche; 
#=GS B4K8N8/97-160      AC B4K8N8
#=GS B4K8N8/97-160      OS Drosophila mojavensis
#=GS B4K8N8/97-160      DE Uncharacterized protein
#=GS B4K8N8/97-160      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Drosophila; repleta group; mulleri subgroup; Drosophila mojavensis; 
#=GS B4HEM7/97-160      AC B4HEM7
#=GS B4HEM7/97-160      OS Drosophila sechellia
#=GS B4HEM7/97-160      DE GM24166
#=GS B4HEM7/97-160      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila sechellia; 
#=GS B3LVG8/97-160      AC B3LVG8
#=GS B3LVG8/97-160      OS Drosophila ananassae
#=GS B3LVG8/97-160      DE Uncharacterized protein
#=GS B3LVG8/97-160      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; ananassae subgroup; Drosophila ananassae; 
#=GS B3P3K0/97-160      AC B3P3K0
#=GS B3P3K0/97-160      OS Drosophila erecta
#=GS B3P3K0/97-160      DE GG16856
#=GS B3P3K0/97-160      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila erecta; 
#=GS B4PSS9/97-160      AC B4PSS9
#=GS B4PSS9/97-160      OS Drosophila yakuba
#=GS B4PSS9/97-160      DE Uncharacterized protein
#=GS B4PSS9/97-160      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila yakuba; 
#=GF SQ 28
Q9VFJ2/97-160              ------------QAAGIQRGTMTPGKEVAGMITLKHLYEIAAIKIQDPPNVLLTMQQMCEMLISIARTCGIKVVRE--
D6WSF4/96-159              ------------QAAGIQRAAMEPGKEIAGKVTLKHVYEIAKLKSVDPTLETRSLDDLCQMVCGIARSCGIEVVRD--
Q7QBV9/97-161              ------------QAAGIQRGAMSPGKEIAGKITRKHLYEIAKIKLQDPPNALLTLEHMCKALVGVARTCGIEIVNEL-
E9G7U8/76-149              TINQPPATYFLKQAAGIQRGAMKHAQEVAGKVSLKHVYEIAKIKQQDATLSFLPLETICKQVVAIAKSCGIEVV----
T1G6I6/86-157              ---NPPVSYFLKLAAGIDRGAMKTGREVSGFVSLKHIYEIAAIKSADPCWKHVPLNEICQSIIGTAHSCGIEVVE---
Q17AX3/97-162              ------------QAAGIQRGAMNPGKEVAGKITRKHLYEIAQIKLQDPPNALLTLEQMCKALVGIARTCGIEIVNELE
B0X294/97-161              ------------QAAGIQRGAMNPGRETAGRITRKHLYEIAQIKAQDPPNALLTLEQMCKALVGVARTCGIEIVNEL-
W5JUE0/97-161              ------------QAAGIQRGAMSPGKEVAGKITRKHLYEIAQIKLQDPPNALLSLEHMCKALVGVARTCGIEIVNEL-
A0A084WA24/97-161          ------------QAAGIQRGAMNPGKEIAGKITRKHLYEIAQIKLQDPPNALLSLEHMCKALVGVARTCGIEIVNEL-
A0A182XVH9/97-161          ------------QAAGIQRGAMSPGKEIAGKITRKHLYEIAKIKLQDPPNALLTLEHMCKALVGIARTCGIEIVNEL-
A0A182UPS0/97-161          ------------QAAGIQRGAMSPGKEIAGKITRKHLYEIAKIKLQDPPNALLTLEHMCKALVGVARTCGIEIVNEL-
A0A182XEJ2/97-161          ------------QAAGIQRGAMSPGKEIAGKITRKHLYEIAKIKLQDPPNALLTLEHMCKALVGVARTCGIEIVNEL-
A0A182HTD8/97-161          ------------QAAGIQRGAMSPGKEIAGKITRKHLYEIAKIKLQDPPNALLTLEHMCKALVGVARTCGIEIVNEL-
A0A182LFJ1/97-161          ------------QAAGIQRGAMSPGKEIAGKITRKHLYEIAKIKLQDPPNALLTLEHMCKALVGVARTCGIEIVNEL-
A0A182TQS5/97-161          ------------QAAGIQRGAMSPGKEIAGKITRKHLYEIAKIKLQDPPNALLTLEHMCKALVGVARTCGIEIVNEL-
A0A0M4EGU4/97-160          ------------QAAGLQRGTMTPGREVAGMITLKHLYEIAAIKIQDPPNAMLTMQQMCEMLIGIARTCGIKVVRE--
B4LYJ4/97-160              ------------QAAGIQRGTMTPGHEVAGMITLKHLYEIAAIKIQDPPNALLTMQQMCEMLISIARTCGIKVVRD--
B4JTM0/97-160              ------------QAAGIQRGTMTPGREVAGMITLKHLYEIAEIKIQDPPNALITMQQMCEMLIGIARTCGIKVVRH--
B4N936/97-161              ------------QAAGIQRGTMTPGREVAGMITLKHLYEIAQIKIQDPPNVMLTMQQMCEMLIGIARTCGIKVVRDL-
B4QZU5/97-160              ------------QAAGIQRGTMTPGKEVAGMITLKHLYEIAAIKIQDPPNVLLTMQQMCEMLISIARTCGIKVVRE--
B4G5Z0/97-160              ------------QAAGIQRGTMTPGKEVAGMITLKHLYEIAAIKIQDPPNALLSMQQMCEMLISIARTCGIKVVRD--
Q29AH6/97-160              ------------QAAGIQRGTMTPGKEVAGMITLKHLYEIAAIKIQDPPNALLSMQQMCEMLISIARTCGIKVVRD--
A0A3B0JKL8/97-160          ------------QAAGIQRGTMTPGKEVAGMITLKHLYEIAAIKIQDPPNALLSMQQMCEMLISIARTCGIKVVRD--
B4K8N8/97-160              ------------QAAGIQRGTMTPGREVAGKITLKHLYEIAAIKIQDPPNAMLTMKQMCEMLIGIARTCGIKVVRD--
B4HEM7/97-160              ------------QAAGIQRGTMTPGKEVAGMITLKHLYEIAAIKIQDPPNVLLTMQQMCEMLISIARTCGIKVVRE--
B3LVG8/97-160              ------------QAAGIQRGTMTPGKEVAGMITLKHLYEIAAIKIQDPPNALLTMQQMCEMLISIARTCGIKVVRD--
B3P3K0/97-160              ------------QAAGIQRGTMTPGKEVAGMITLKHLYEIAAIKIQDPPNALLTMQQMCEMLISIARTCGIKVVRE--
B4PSS9/97-160              ------------QAAGIQRGTMTPGKEVAGMITLKHLYEIAAIKIQDPPNALLTMQQMCEMLISIARTCGIKVVRE--
#=GC scorecons             000000000000799987986947869789477599799994894798655575655795476669769996794410
#=GC scorecons_70          ____________**********_*******_**_*******_**_****___*_*__**__**_*******_**____
#=GC scorecons_80          ____________********_*__*_*_**_**_**_****_**__**_________**______**_***_**____
#=GC scorecons_90          _____________****_**_*____*__*____**_****_**__*___________*______*__***__*____
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