# STOCKHOLM 1.0
#=GF ID 1.10.10.10/FF/000992
#=GF DE RNA polymerase sigma factor
#=GF AC 1.10.10.10/FF/000992
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 18.019
#=GS O22056/492-572      AC O22056
#=GS O22056/492-572      OS Arabidopsis thaliana
#=GS O22056/492-572      DE RNA polymerase sigma factor sigB
#=GS O22056/492-572      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana; 
#=GS O22056/492-572      DR GO; GO:0006352; GO:0006399; GO:0009507; GO:0009658; GO:0010114; GO:0016987; GO:0071482; GO:2001141; 
#=GS M4DQ26/489-573      AC M4DQ26
#=GS M4DQ26/489-573      OS Brassica rapa subsp. pekinensis
#=GS M4DQ26/489-573      DE RNA polymerase sigma factor
#=GS M4DQ26/489-573      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Brassiceae; Brassica; Brassica rapa; Brassica rapa subsp. pekinensis; 
#=GS Q9MTH3/491-575      AC Q9MTH3
#=GS Q9MTH3/491-575      OS Sinapis alba
#=GS Q9MTH3/491-575      DE RNA polymerase sigma factor
#=GS Q9MTH3/491-575      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Brassiceae; Sinapis; Sinapis alba; 
#=GS R0IC61/491-571      AC R0IC61
#=GS R0IC61/491-571      OS Capsella rubella
#=GS R0IC61/491-571      DE RNA polymerase sigma factor
#=GS R0IC61/491-571      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Capsella; Capsella rubella; 
#=GS A0A0D3C8I9/499-583  AC A0A0D3C8I9
#=GS A0A0D3C8I9/499-583  OS Brassica oleracea var. oleracea
#=GS A0A0D3C8I9/499-583  DE RNA polymerase sigma factor
#=GS A0A0D3C8I9/499-583  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Brassiceae; Brassica; Brassica oleracea; Brassica oleracea var. oleracea; 
#=GS D7KIT0/492-572      AC D7KIT0
#=GS D7KIT0/492-572      OS Arabidopsis lyrata subsp. lyrata
#=GS D7KIT0/492-572      DE RNA polymerase sigma factor
#=GS D7KIT0/492-572      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis lyrata; Arabidopsis lyrata subsp. lyrata; 
#=GS A0A3P6ECA8/499-583  AC A0A3P6ECA8
#=GS A0A3P6ECA8/499-583  OS Brassica oleracea
#=GS A0A3P6ECA8/499-583  DE RNA polymerase sigma factor
#=GS A0A3P6ECA8/499-583  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Brassiceae; Brassica; Brassica oleracea; 
#=GF SQ 7
O22056/492-572              -LIKEFMRQDLDKVLDSLGTREKQVIRWRFGMEDGRMKTLQEIGEMMGVSRERVRQIESSAFRKLKNKKRNNHLQQYLVAQS---
M4DQ26/489-573              ILMKQFMREDLDKVLDSLGTREKQVIRWRFGMEDGRMKTLQEIGETMGVSRERVRQIESSAFRKLKNKKRNNHLQQYLVAQTKES
Q9MTH3/491-575              ILMKQFMRQDLDKVLDSLSTREKQVIRWRFGMEDGRMKTLQEIGETMGVSRERVRQIDTSAFRKLKNKKRNSHLQQYLVAQTKES
R0IC61/491-571              -LIKQFMREDLDKVLDSLGTREKQVIRWRFGMEDGRMKTLQEIGELMGVSRERVRQIESSAFRKLKNKKRSNHLQQYLVAQS---
A0A0D3C8I9/499-583          ILMKQFMREDLDKVLDSLGTREKQVIRWRFGMEDGRMKTLQEIGETMGVSRERVRQIESSAFRKLKNKKRNYHLQQYLVAQTKES
D7KIT0/492-572              -LIKEFMRQDLDKVLDSLGTREKQVIRWRFGMEDGRMKTLQEIGEMMGVSRERVRQIESSAFRKLKNKKRSNHLQQYLVAQS---
A0A3P6ECA8/499-583          ILMKQFMREDLDKVLDSLGTREKQVIRWRFGMEDGRMKTLQEIGETMGVSRERVRQIESSAFRKLKNKKRNYHLQQYLVAQTKES
#=GC scorecons              2969699969999999997999999999999999999999999994999999999997799999999999649999999995222
#=GC scorecons_70           _*******_************************************_************************__*********____
#=GC scorecons_80           _*_*_***_************************************_************************__*********____
#=GC scorecons_90           _*_*_***_*********_**************************_***********__***********__*********____
//