# STOCKHOLM 1.0
#=GF ID 4.10.60.10/FF/803
#=GF DE Truncated Pr160 gag-pol polyprotein
#=GF AC 4.10.60.10/FF/803
#=GF TP FunFam
#=GF DR CATH: 4.2
#=GF DR DOPS: 21.853
#=GS 2ihxA00/1-61    AC Q77YH0
#=GS 2ihxA00/1-61    OS Rous sarcoma virus
#=GS 2ihxA00/1-61    DE Pr76 polyprotein
#=GS 2ihxA00/1-61    DR CATH; 2ihx; A:15-64; 
#=GS 2ihxA00/1-61    DR ORG; Viruses; Retroviridae; Orthoretrovirinae; Alpharetrovirus; Rous sarcoma virus; 
#=GS Q04095/503-563  AC Q04095
#=GS Q04095/503-563  OS Rous sarcoma virus (strain Schmidt-Ruppin A)
#=GS Q04095/503-563  DE Gag-Pro-Pol polyprotein
#=GS Q04095/503-563  DR GENE3D; 08a95ff0af5ea705e30d3c3ea0f0b939/503-563; 
#=GS Q04095/503-563  DR ORG; Viruses; Retroviridae; Orthoretrovirinae; Alpharetrovirus; Rous sarcoma virus; 
#=GS Q04095/503-563  DR EC; 2.7.7.49; 2.7.7.7; 3.1.26.4; 
#=GS O92956/503-563  AC O92956
#=GS O92956/503-563  OS Rous sarcoma virus - Schmidt-Ruppin B
#=GS O92956/503-563  DE Gag-Pro-Pol polyprotein
#=GS O92956/503-563  DR GENE3D; 37e0dffd15fdd823a62a7ad9972c557f/503-563; 
#=GS O92956/503-563  DR ORG; Viruses; Retroviridae; Orthoretrovirinae; Alpharetrovirus; Rous sarcoma virus; 
#=GS O92956/503-563  DR EC; 2.7.7.49; 2.7.7.7; 3.1.26.4; 
#=GS P03354/503-563  AC P03354
#=GS P03354/503-563  OS Rous sarcoma virus - Prague C
#=GS P03354/503-563  DE Gag-Pro-Pol polyprotein
#=GS P03354/503-563  DR GENE3D; f36623226a6306d750289dede37689a2/503-563; 
#=GS P03354/503-563  DR ORG; Viruses; Retroviridae; Orthoretrovirinae; Alpharetrovirus; Rous sarcoma virus; 
#=GS P03354/503-563  DR EC; 2.7.7.49; 2.7.7.7; 3.1.26.4; 
#=GS O92954/503-563  AC O92954
#=GS O92954/503-563  OS Rous sarcoma virus - Schmidt-Ruppin B
#=GS O92954/503-563  DE Gag-Pro polyprotein
#=GS O92954/503-563  DR GENE3D; 0416ab06713131e092cfc5d4fcc66176/503-563; 
#=GS O92954/503-563  DR ORG; Viruses; Retroviridae; Orthoretrovirinae; Alpharetrovirus; Rous sarcoma virus; 
#=GS Q98WV8/503-563  AC Q98WV8
#=GS Q98WV8/503-563  OS Avian leukosis virus
#=GS Q98WV8/503-563  DE Gag polyprotein
#=GS Q98WV8/503-563  DR GENE3D; 05e88d866f348cc96f032545a56c456d/503-563; 
#=GS Q98WV8/503-563  DR ORG; Viruses; Retroviridae; Orthoretrovirinae; Alpharetrovirus; Avian leukosis virus; 
#=GS Q86931/7-59     AC Q86931
#=GS Q86931/7-59     OS Avian myeloblastosis-associated virus
#=GS Q86931/7-59     DE p15gag proteinase
#=GS Q86931/7-59     DR GENE3D; 8a83ff0b41d6ec763d6000b2ba2fd33e/7-59; 
#=GS Q86931/7-59     DR ORG; Viruses; Retroviridae; Orthoretrovirinae; Alpharetrovirus; Avian myeloblastosis-associated virus; 
#=GS P0C776/503-563  AC P0C776
#=GS P0C776/503-563  OS Rous sarcoma virus (strain Schmidt-Ruppin A)
#=GS P0C776/503-563  DE Gag-Pro polyprotein
#=GS P0C776/503-563  DR GENE3D; 9719e02fd3089ce67222c68cdb54f2f9/503-563; 
#=GS P0C776/503-563  DR ORG; Viruses; Retroviridae; Orthoretrovirinae; Alpharetrovirus; Rous sarcoma virus; 
#=GS Q77YH0/503-563  AC Q77YH0
#=GS Q77YH0/503-563  OS Rous sarcoma virus
#=GS Q77YH0/503-563  DE Pr76 polyprotein
#=GS Q77YH0/503-563  DR GENE3D; ae9f9cf936000431a83f5b02581a633d/503-563; 
#=GS Q77YH0/503-563  DR ORG; Viruses; Retroviridae; Orthoretrovirinae; Alpharetrovirus; Rous sarcoma virus; 
#=GS P03322/503-563  AC P03322
#=GS P03322/503-563  OS Rous sarcoma virus - Prague C
#=GS P03322/503-563  DE Gag-Pro polyprotein
#=GS P03322/503-563  DR GENE3D; ae9f9cf936000431a83f5b02581a633d/503-563; 
#=GS P03322/503-563  DR ORG; Viruses; Retroviridae; Orthoretrovirinae; Alpharetrovirus; Rous sarcoma virus; 
#=GF TC 128.5 4.1E-41
#=GF SQ 10
2ihxA00/1-61            GRARGLCYTCGSPGHYQAQCPKKRKSGNSRERCQLCNGMGHNAKQCRKRDGNQGQRPGKGL
Q04095/503-563          GRARGLCYTCGSPGHYQAQCPKKRKSGNSRERCQLCDGMGHNAKQCRRRDGNQGQRPGKGL
O92956/503-563          GRARRLCYTCGSPGHYQAQCPKKRKSGNSRERCQLCDGMGHNAKQCRRRDSNQGQRPGRGL
P03354/503-563          GRARGLCYTCGSPGHYQAQCPKKRKSGNSRERCQLCNGMGHNAKQCRKRDGNQGQRPGKGL
O92954/503-563          GRARRLCYTCGSPGHYQAQCPKKRKSGNSRERCQLCDGMGHNAKQCRRRDSNQGQRPGRGL
Q98WV8/503-563          GRARGLCYTCGSPGHYQAQCPKKRKSGNSRERCQLCDGMGHNAKQCRRRDGNQGQRPGRGL
Q86931/7-59             --------SWGSPGHYQAQCPKKRKSGNSRERCQLCDGMGHNAKQCRKRDGNQGQRPGRGL
P0C776/503-563          GRARGLCYTCGSPGHYQAQCPKKRKSGNSRERCQLCDGMGHNAKQCRRRDGNQGQRPGKGL
Q77YH0/503-563          GRARGLCYTCGSPGHYQAQCPKKRKSGNSRERCQLCNGMGHNAKQCRKRDGNQGQRPGKGL
P03322/503-563          GRARGLCYTCGSPGHYQAQCPKKRKSGNSRERCQLCNGMGHNAKQCRKRDGNQGQRPGKGL
#=GC scorecons          4444244466999999999999999999999999996999999999969979999999699
#=GC scorecons_70       __________***************************************************
#=GC scorecons_80       __________**************************_**********_**_*******_**
#=GC scorecons_90       __________**************************_**********_**_*******_**
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